RNA–Protein interactions for RNA: ENSMUST00000019991.7

Tube1-201, Transcript of Tubulin epsilon chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tube1, Length 2,929 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1-201ENSMUST00000019991 NischQ80TM9 1593 aa19.81■□□□□ 0.76
Tube1-201ENSMUST00000019991 Rhox8Q6VSS7 320 aa19.38■□□□□ 0.69
Tube1-201ENSMUST00000019991 Abcc9P70170 1546 aa19.15■□□□□ 0.66
Tube1-201ENSMUST00000019991 Gm35339A0A140LHH9 1649 aa18.87■□□□□ 0.61
Tube1-201ENSMUST00000019991 Rtl1Q7M732 1744 aa18.71■□□□□ 0.59
Tube1-201ENSMUST00000019991 Rpgrip1Q9EPQ2 1331 aa18.67■□□□□ 0.58
Tube1-201ENSMUST00000019991 Ccdc180J3QNE4 1664 aa18.64■□□□□ 0.58
Tube1-201ENSMUST00000019991 Ehmt2Q9Z148 1263 aaKnown RBP18.63■□□□□ 0.57
Tube1-201ENSMUST00000019991 Abcc8B2RUS7 1588 aa18.61■□□□□ 0.57
Tube1-201ENSMUST00000019991 Acin1Q9JIX8 1338 aaKnown RBP18.4■□□□□ 0.54
Tube1-201ENSMUST00000019991 Zcchc6Q5BLK4 1491 aaKnown RBP18.2■□□□□ 0.5
Tube1-201ENSMUST00000019991 Pcgf6Q99NA9 353 aa18.09■□□□□ 0.49
Tube1-201ENSMUST00000019991 Ccdc136Q3TVA9 1136 aa17.95■□□□□ 0.46
Tube1-201ENSMUST00000019991 HrcG5E8J6 738 aa17.81■□□□□ 0.44
Tube1-201ENSMUST00000019991 Dcaf1Q80TR8 1506 aa17.8■□□□□ 0.44
Tube1-201ENSMUST00000019991 Supt5hO55201 1082 aaKnown RBP17.74■□□□□ 0.43
Tube1-201ENSMUST00000019991 Trim41Q5NCC3 630 aa17.64■□□□□ 0.41
Tube1-201ENSMUST00000019991 Neurod1Q60867 357 aa17.47■□□□□ 0.39
Tube1-201ENSMUST00000019991 Zeb1Q64318 1117 aa17.43■□□□□ 0.38
Tube1-201ENSMUST00000019991 Rb1cc1Q9ESK9 1588 aa17.41■□□□□ 0.38
Tube1-201ENSMUST00000019991 Gab3Q8BSM5 595 aa17.26■□□□□ 0.35
Tube1-201ENSMUST00000019991 Cngb1E1AZ71 1325 aa17.2■□□□□ 0.34
Tube1-201ENSMUST00000019991 Cep164Q5DU05 1446 aa17.18■□□□□ 0.34
Tube1-201ENSMUST00000019991 ScribQ80U72 1612 aa17.16■□□□□ 0.34
Tube1-201ENSMUST00000019991 Baz1aO88379 1555 aa17.12■□□□□ 0.33
Tube1-201ENSMUST00000019991 Sall2Q9QX96 1004 aa17.1■□□□□ 0.33
Tube1-201ENSMUST00000019991 Chic1Q8CBW7 227 aa17.08■□□□□ 0.32
Tube1-201ENSMUST00000019991 Mier1Q5UAK0 511 aa17.07■□□□□ 0.32
Tube1-201ENSMUST00000019991 Kdm5dQ62240 1548 aa16.98■□□□□ 0.31
Tube1-201ENSMUST00000019991 Las1lA2BE28 776 aaKnown RBP16.95■□□□□ 0.3
Tube1-201ENSMUST00000019991 NefmP08553 848 aa16.95■□□□□ 0.3
Tube1-201ENSMUST00000019991 Csrnp3P59055 597 aa16.95■□□□□ 0.3
Tube1-201ENSMUST00000019991 Rsf1E9PWW9 1441 aaKnown RBP16.94■□□□□ 0.3
Tube1-201ENSMUST00000019991 1700123L14RikQ3V2K7 440 aa16.93■□□□□ 0.3
Tube1-201ENSMUST00000019991 Ppargc1bQ8VHJ7 1014 aa16.9■□□□□ 0.3
Tube1-201ENSMUST00000019991 Wdr66E9Q743 1299 aa16.88■□□□□ 0.29
Tube1-201ENSMUST00000019991 Aebp2Q9Z248 504 aaKnown RBP16.79■□□□□ 0.28
Tube1-201ENSMUST00000019991 Anks4bQ8K3X6 423 aa16.78■□□□□ 0.28
Tube1-201ENSMUST00000019991 Smarca2Q6DIC0 1577 aa16.78■□□□□ 0.28
Tube1-201ENSMUST00000019991 Ccdc88bQ4QRL3 1481 aa16.77■□□□□ 0.28
Tube1-201ENSMUST00000019991 UbtfP25976 765 aaKnown RBP16.76■□□□□ 0.27
Tube1-201ENSMUST00000019991 Gm38655A0A286YDK6 273 aa16.72■□□□□ 0.27
Tube1-201ENSMUST00000019991 NacadQ5SWP3 1504 aa16.65■□□□□ 0.26
Tube1-201ENSMUST00000019991 Cdk11bP24788 784 aaKnown RBP16.62■□□□□ 0.25
Tube1-201ENSMUST00000019991 Nop58Q6DFW4 536 aaKnown RBP16.61■□□□□ 0.25
Tube1-201ENSMUST00000019991 Esf1Q3V1V3 845 aaKnown RBP16.54■□□□□ 0.24
Tube1-201ENSMUST00000019991 Golga3P55937 1487 aa16.51■□□□□ 0.23
Tube1-201ENSMUST00000019991 ClspnQ80YR7 1315 aa16.5■□□□□ 0.23
Tube1-201ENSMUST00000019991 Cecr2E9Q2Z1 1453 aa16.5■□□□□ 0.23
Tube1-201ENSMUST00000019991 Brd4Q9ESU6 1400 aaKnown RBP16.47■□□□□ 0.23
Tube1-201ENSMUST00000019991 Myt1lP97500 1187 aa16.47■□□□□ 0.23
Tube1-201ENSMUST00000019991 Crybg2B7ZCC2 1516 aa16.45■□□□□ 0.22
Tube1-201ENSMUST00000019991 Aplp2Q06335 707 aa16.44■□□□□ 0.22
Tube1-201ENSMUST00000019991 CenpbP27790 599 aa16.43■□□□□ 0.22
Tube1-201ENSMUST00000019991 Synj1Q8CHC4 1574 aa16.37■□□□□ 0.21
Tube1-201ENSMUST00000019991 TonslQ6NZL6 1363 aa16.36■□□□□ 0.21
Tube1-201ENSMUST00000019991 Plekhg3Q4VAC9 1341 aa16.3■□□□□ 0.2
Tube1-201ENSMUST00000019991 Sycp2Q9CUU3 1500 aa16.3■□□□□ 0.2
Tube1-201ENSMUST00000019991 Mapk8ip2Q9ERE9 830 aa16.25■□□□□ 0.19
Tube1-201ENSMUST00000019991 SafbD3YXK2 937 aaKnown RBP16.24■□□□□ 0.19
Tube1-201ENSMUST00000019991 Eid3Q3V124 375 aa16.2■□□□□ 0.18
Tube1-201ENSMUST00000019991 Ap3b1Q9Z1T1 1105 aa16.2■□□□□ 0.18
Tube1-201ENSMUST00000019991 Npm2Q80W85 207 aa16.19■□□□□ 0.18
Tube1-201ENSMUST00000019991 Hnrnpul2Q00PI9 745 aaKnown RBP16.18■□□□□ 0.18
Tube1-201ENSMUST00000019991 CftrP26361 1476 aa16.17■□□□□ 0.18
Tube1-201ENSMUST00000019991 Cc2d2aQ8CFW7 1633 aa16.15■□□□□ 0.18
Tube1-201ENSMUST00000019991 Rapgef2Q8CHG7 1496 aa16.15■□□□□ 0.18
Tube1-201ENSMUST00000019991 Myt1Q8CFC2 1127 aa16.14■□□□□ 0.17
Tube1-201ENSMUST00000019991 Fam71e1A1L3C1 212 aa16.13■□□□□ 0.17
Tube1-201ENSMUST00000019991 Top2bQ64511 1612 aa16.12■□□□□ 0.17
Tube1-201ENSMUST00000019991 Cep162Q6ZQ06 1403 aa16.11■□□□□ 0.17
Tube1-201ENSMUST00000019991 Clip1Q922J3 1391 aa16.07■□□□□ 0.16
Tube1-201ENSMUST00000019991 BicraF8VPZ9 1578 aa16■□□□□ 0.15
Tube1-201ENSMUST00000019991 Ncapd3Q6ZQK0 1506 aa15.96■□□□□ 0.15
Tube1-201ENSMUST00000019991 Top2aQ01320 1528 aaKnown RBP15.94■□□□□ 0.14
Tube1-201ENSMUST00000019991 DiexfQ8BTT6 772 aaKnown RBP15.93■□□□□ 0.14
Tube1-201ENSMUST00000019991 Cttnbp2B9EJA2 1648 aa15.92■□□□□ 0.14
Tube1-201ENSMUST00000019991 Fmn1Q05860 1466 aa15.91■□□□□ 0.14
Tube1-201ENSMUST00000019991 Tnnt3Q9QZ47 272 aa15.88■□□□□ 0.13
Tube1-201ENSMUST00000019991 Bcl11aQ9QYE3 773 aa15.88■□□□□ 0.13
Tube1-201ENSMUST00000019991 NclP09405 707 aaKnown RBP15.8■□□□□ 0.12
Tube1-201ENSMUST00000019991 Slc24a1Q91WD8 1130 aa15.78■□□□□ 0.12
Tube1-201ENSMUST00000019991 Ifnlr1Q8CGK5 535 aa15.78■□□□□ 0.12
Tube1-201ENSMUST00000019991 Znf710Q3U288 666 aa15.77■□□□□ 0.12
Tube1-201ENSMUST00000019991 Il27Q8K3I6 234 aa15.77■□□□□ 0.12
Tube1-201ENSMUST00000019991 Fam50aQ9WV03 339 aaKnown RBP15.77■□□□□ 0.12
Tube1-201ENSMUST00000019991 Rpap1Q80TE0 1409 aa15.76■□□□□ 0.11
Tube1-201ENSMUST00000019991 Arap1Q4LDD4 1452 aa15.74■□□□□ 0.11
Tube1-201ENSMUST00000019991 Anp32aO35381 247 aa15.72■□□□□ 0.11
Tube1-201ENSMUST00000019991 Smarca4Q3TKT4 1613 aaKnown RBP15.72■□□□□ 0.11
Tube1-201ENSMUST00000019991 Nolc1E9Q5C9 702 aaKnown RBP15.71■□□□□ 0.11
Tube1-201ENSMUST00000019991 Kdm5bQ80Y84 1544 aa15.7■□□□□ 0.1
Tube1-201ENSMUST00000019991 Eif4g1Q6NZJ6 1600 aaKnown RBP15.69■□□□□ 0.1
Tube1-201ENSMUST00000019991 Eea1Q8BL66 1411 aa15.68■□□□□ 0.1
Tube1-201ENSMUST00000019991 Setd5Q5XJV7 1441 aa15.68■□□□□ 0.1
Tube1-201ENSMUST00000019991 Arhgap35Q91YM2 1499 aa15.67■□□□□ 0.1
Tube1-201ENSMUST00000019991 PtprkP35822 1457 aa15.67■□□□□ 0.1
Tube1-201ENSMUST00000019991 Lmod2Q3UHZ5 550 aa15.66■□□□□ 0.1
Tube1-201ENSMUST00000019991 Calr4Q3TQS0 420 aa15.65■□□□□ 0.1
Tube1-201ENSMUST00000019991 Baz1bQ9Z277 1479 aa15.63■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms