RNA–Protein interactions for RNA: ENSMUST00000019169.7

Use1-201, Transcript of Vesicle transport protein USE1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Use1, Length 854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Use1-201ENSMUST00000019169 Gm35339A0A140LHH9 1649 aa25.21■■□□□ 1.63
Use1-201ENSMUST00000019169 NischQ80TM9 1593 aa24.81■■□□□ 1.56
Use1-201ENSMUST00000019169 Abcc9P70170 1546 aa24.03■■□□□ 1.44
Use1-201ENSMUST00000019169 Abcc8B2RUS7 1588 aa23.99■■□□□ 1.43
Use1-201ENSMUST00000019169 ScribQ80U72 1612 aa23.13■■□□□ 1.29
Use1-201ENSMUST00000019169 NacadQ5SWP3 1504 aa22.46■■□□□ 1.19
Use1-201ENSMUST00000019169 Kdm5dQ62240 1548 aa22.38■■□□□ 1.17
Use1-201ENSMUST00000019169 Dcaf1Q80TR8 1506 aa22.14■■□□□ 1.13
Use1-201ENSMUST00000019169 Sycp2Q9CUU3 1500 aa21.99■■□□□ 1.11
Use1-201ENSMUST00000019169 BicraF8VPZ9 1578 aa21.65■■□□□ 1.06
Use1-201ENSMUST00000019169 Rb1cc1Q9ESK9 1588 aa21.64■■□□□ 1.05
Use1-201ENSMUST00000019169 Ccdc180J3QNE4 1664 aa21.41■■□□□ 1.02
Use1-201ENSMUST00000019169 Baz1aO88379 1555 aa21.35■■□□□ 1.01
Use1-201ENSMUST00000019169 Rhox8Q6VSS7 320 aa21.33■■□□□ 1.01
Use1-201ENSMUST00000019169 Crybg2B7ZCC2 1516 aa21.29■■□□□ 1
Use1-201ENSMUST00000019169 Pds5bQ4VA53 1446 aaKnown RBP21.13■□□□□ 0.97
Use1-201ENSMUST00000019169 Zcchc6Q5BLK4 1491 aaKnown RBP21■□□□□ 0.95
Use1-201ENSMUST00000019169 Dnajc5bQ9CQ94 199 aa20.96■□□□□ 0.95
Use1-201ENSMUST00000019169 Thoc2B1AZI6 1594 aaKnown RBP20.95■□□□□ 0.94
Use1-201ENSMUST00000019169 Atad2bE9Q166 1460 aaKnown RBP20.91■□□□□ 0.94
Use1-201ENSMUST00000019169 Smarca4Q3TKT4 1613 aaKnown RBP20.73■□□□□ 0.91
Use1-201ENSMUST00000019169 Ercc6F8VPZ5 1481 aa20.71■□□□□ 0.91
Use1-201ENSMUST00000019169 Smarca2Q6DIC0 1577 aa20.71■□□□□ 0.91
Use1-201ENSMUST00000019169 Iqgap2Q3UQ44 1575 aa20.62■□□□□ 0.89
Use1-201ENSMUST00000019169 Cc2d2aQ8CFW7 1633 aa20.58■□□□□ 0.89
Use1-201ENSMUST00000019169 Cecr2E9Q2Z1 1453 aa20.56■□□□□ 0.88
Use1-201ENSMUST00000019169 Fam135aQ6NS59 1506 aa20.48■□□□□ 0.87
Use1-201ENSMUST00000019169 Wdr62Q3U3T8 1523 aa20.44■□□□□ 0.86
Use1-201ENSMUST00000019169 Rtl1Q7M732 1744 aa20.41■□□□□ 0.86
Use1-201ENSMUST00000019169 Baz1bQ9Z277 1479 aa20.38■□□□□ 0.85
Use1-201ENSMUST00000019169 Frmpd1A2AKB4 1549 aa20.37■□□□□ 0.85
Use1-201ENSMUST00000019169 Phldb1Q6PDH0 1371 aaKnown RBP20.31■□□□□ 0.84
Use1-201ENSMUST00000019169 Cttnbp2B9EJA2 1648 aa20.19■□□□□ 0.82
Use1-201ENSMUST00000019169 CftrP26361 1476 aa20.16■□□□□ 0.82
Use1-201ENSMUST00000019169 Brd4Q9ESU6 1400 aaKnown RBP20.15■□□□□ 0.82
Use1-201ENSMUST00000019169 Synj1Q8CHC4 1574 aa20.09■□□□□ 0.81
Use1-201ENSMUST00000019169 Unc13aQ4KUS2 1712 aa20.09■□□□□ 0.81
Use1-201ENSMUST00000019169 Ubl4bQ9CQ84 188 aa20.06■□□□□ 0.8
Use1-201ENSMUST00000019169 Mrc2Q64449 1479 aa20■□□□□ 0.79
Use1-201ENSMUST00000019169 Ccdc136Q3TVA9 1136 aa19.93■□□□□ 0.78
Use1-201ENSMUST00000019169 Esf1Q3V1V3 845 aaKnown RBP19.77■□□□□ 0.76
Use1-201ENSMUST00000019169 Trim41Q5NCC3 630 aa19.74■□□□□ 0.75
Use1-201ENSMUST00000019169 Rsf1E9PWW9 1441 aaKnown RBP19.72■□□□□ 0.75
Use1-201ENSMUST00000019169 Kif15Q6P9L6 1387 aa19.65■□□□□ 0.74
Use1-201ENSMUST00000019169 Cux2P70298 1426 aa19.64■□□□□ 0.73
Use1-201ENSMUST00000019169 Lamc3Q9R0B6 1581 aa19.6■□□□□ 0.73
Use1-201ENSMUST00000019169 Lrriq1Q0P5X1 1673 aa19.54■□□□□ 0.72
Use1-201ENSMUST00000019169 Kif21aQ9QXL2 1672 aa19.5■□□□□ 0.71
Use1-201ENSMUST00000019169 Npm1Q61937 292 aaKnown RBP19.43■□□□□ 0.7
Use1-201ENSMUST00000019169 Cep164Q5DU05 1446 aa19.42■□□□□ 0.7
Use1-201ENSMUST00000019169 Golga3P55937 1487 aa19.39■□□□□ 0.69
Use1-201ENSMUST00000019169 Top2bQ64511 1612 aa19.38■□□□□ 0.69
Use1-201ENSMUST00000019169 TnnQ80Z71 1560 aa19.38■□□□□ 0.69
Use1-201ENSMUST00000019169 Ccdc18Q640L5 1455 aa19.35■□□□□ 0.69
Use1-201ENSMUST00000019169 Eif4g3Q80XI3 1579 aaKnown RBP19.31■□□□□ 0.68
Use1-201ENSMUST00000019169 Camsap1A2AHC3 1581 aa19.25■□□□□ 0.67
Use1-201ENSMUST00000019169 Cngb1E1AZ71 1325 aa19.25■□□□□ 0.67
Use1-201ENSMUST00000019169 Dhx29Q6PGC1 1365 aaKnown RBP19.22■□□□□ 0.67
Use1-201ENSMUST00000019169 Fmn1Q05860 1466 aa19.21■□□□□ 0.67
Use1-201ENSMUST00000019169 LrpprcQ6PB66 1392 aaKnown RBP19.19■□□□□ 0.66
Use1-201ENSMUST00000019169 Urb2E9Q7L1 1524 aaKnown RBP19.18■□□□□ 0.66
Use1-201ENSMUST00000019169 Crocc2F6XLV1 1638 aa19.18■□□□□ 0.66
Use1-201ENSMUST00000019169 Il27Q8K3I6 234 aa19.17■□□□□ 0.66
Use1-201ENSMUST00000019169 Plb1Q3TTY0 1478 aa19.15■□□□□ 0.66
Use1-201ENSMUST00000019169 Dnajc5P60904 198 aa19.1■□□□□ 0.65
Use1-201ENSMUST00000019169 Shroom2A2ALU4 1481 aa19.09■□□□□ 0.65
Use1-201ENSMUST00000019169 PogzQ8BZH4 1409 aaKnown RBP19.08■□□□□ 0.65
Use1-201ENSMUST00000019169 Ift140E9PY46 1464 aa19.06■□□□□ 0.64
Use1-201ENSMUST00000019169 Duox2A2AQ99 1517 aa18.99■□□□□ 0.63
Use1-201ENSMUST00000019169 Rusc2Q80U22 1514 aa18.99■□□□□ 0.63
Use1-201ENSMUST00000019169 Grin2bQ01097 1482 aa18.97■□□□□ 0.63
Use1-201ENSMUST00000019169 Pbrm1Q8BSQ9 1634 aaKnown RBP18.89■□□□□ 0.62
Use1-201ENSMUST00000019169 Efcab5A0JP43 1406 aa18.86■□□□□ 0.61
Use1-201ENSMUST00000019169 Disp1Q3TDN0 1521 aa18.84■□□□□ 0.61
Use1-201ENSMUST00000019169 Samd9lQ69Z37 1561 aa18.84■□□□□ 0.61
Use1-201ENSMUST00000019169 Pabpn1Q8CCS6 302 aaKnown RBP18.83■□□□□ 0.6
Use1-201ENSMUST00000019169 Top2aQ01320 1528 aaKnown RBP18.82■□□□□ 0.6
Use1-201ENSMUST00000019169 Cc2d2bA0A286YDU8 1405 aa18.81■□□□□ 0.6
Use1-201ENSMUST00000019169 Nup160Q9Z0W3 1402 aaKnown RBP18.8■□□□□ 0.6
Use1-201ENSMUST00000019169 Ccdc88bQ4QRL3 1481 aa18.77■□□□□ 0.6
Use1-201ENSMUST00000019169 NrkQ9R0G8 1455 aa18.77■□□□□ 0.6
Use1-201ENSMUST00000019169 Col17a1Q07563 1470 aa18.76■□□□□ 0.59
Use1-201ENSMUST00000019169 Setd1bQ8CFT2 1985 aa18.7■□□□□ 0.58
Use1-201ENSMUST00000019169 Pelp1Q9DBD5 1123 aaKnown RBP18.69■□□□□ 0.58
Use1-201ENSMUST00000019169 Grin2aP35436 1464 aa18.69■□□□□ 0.58
Use1-201ENSMUST00000019169 Zcchc11B2RX14 1644 aaKnown RBP18.67■□□□□ 0.58
Use1-201ENSMUST00000019169 Shroom4Q1W617 1475 aa18.67■□□□□ 0.58
Use1-201ENSMUST00000019169 AqrQ8CFQ3 1481 aaKnown RBP18.67■□□□□ 0.58
Use1-201ENSMUST00000019169 Magi3Q9EQJ9 1476 aa18.66■□□□□ 0.58
Use1-201ENSMUST00000019169 Rad54l2Q99NG0 1466 aa18.65■□□□□ 0.58
Use1-201ENSMUST00000019169 Gpatch8A2A6A1 1505 aa18.65■□□□□ 0.58
Use1-201ENSMUST00000019169 SynmQ70IV5 1561 aa18.6■□□□□ 0.57
Use1-201ENSMUST00000019169 Fgd6Q69ZL1 1399 aa18.58■□□□□ 0.57
Use1-201ENSMUST00000019169 Chic1Q8CBW7 227 aa18.58■□□□□ 0.56
Use1-201ENSMUST00000019169 PtprkP35822 1457 aa18.57■□□□□ 0.56
Use1-201ENSMUST00000019169 Pla2r1Q62028 1487 aa18.55■□□□□ 0.56
Use1-201ENSMUST00000019169 Zeb1Q64318 1117 aa18.48■□□□□ 0.55
Use1-201ENSMUST00000019169 Cep170Q6A065 1588 aa18.43■□□□□ 0.54
Use1-201ENSMUST00000019169 Gapvd1Q6PAR5 1458 aa18.43■□□□□ 0.54
Use1-201ENSMUST00000019169 Adgrl3Q80TS3 1537 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms