RNA–Protein interactions for RNA: ENSMUST00000009667.11

Ush1c-201, Transcript of Harmonin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ush1c, Length 3,072 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-201ENSMUST00000009667 NischQ80TM9 1593 aa21■□□□□ 0.95
Ush1c-201ENSMUST00000009667 Rhox8Q6VSS7 320 aa20.62■□□□□ 0.89
Ush1c-201ENSMUST00000009667 Abcc9P70170 1546 aa20.21■□□□□ 0.83
Ush1c-201ENSMUST00000009667 Gm35339A0A140LHH9 1649 aa19.94■□□□□ 0.78
Ush1c-201ENSMUST00000009667 Abcc8B2RUS7 1588 aa19.74■□□□□ 0.75
Ush1c-201ENSMUST00000009667 Ehmt2Q9Z148 1263 aaKnown RBP19.54■□□□□ 0.72
Ush1c-201ENSMUST00000009667 Rtl1Q7M732 1744 aa19.34■□□□□ 0.69
Ush1c-201ENSMUST00000009667 Ccdc180J3QNE4 1664 aa19.31■□□□□ 0.68
Ush1c-201ENSMUST00000009667 Ccdc136Q3TVA9 1136 aa19.14■□□□□ 0.65
Ush1c-201ENSMUST00000009667 Rpgrip1Q9EPQ2 1331 aa19■□□□□ 0.63
Ush1c-201ENSMUST00000009667 Zcchc6Q5BLK4 1491 aaKnown RBP18.91■□□□□ 0.62
Ush1c-201ENSMUST00000009667 Acin1Q9JIX8 1338 aaKnown RBP18.9■□□□□ 0.62
Ush1c-201ENSMUST00000009667 Trim41Q5NCC3 630 aa18.6■□□□□ 0.57
Ush1c-201ENSMUST00000009667 HrcG5E8J6 738 aa18.56■□□□□ 0.56
Ush1c-201ENSMUST00000009667 Pcgf6Q99NA9 353 aa18.54■□□□□ 0.56
Ush1c-201ENSMUST00000009667 Rb1cc1Q9ESK9 1588 aa18.44■□□□□ 0.54
Ush1c-201ENSMUST00000009667 Dcaf1Q80TR8 1506 aa18.41■□□□□ 0.54
Ush1c-201ENSMUST00000009667 Gab3Q8BSM5 595 aa18.33■□□□□ 0.53
Ush1c-201ENSMUST00000009667 ScribQ80U72 1612 aa18.3■□□□□ 0.52
Ush1c-201ENSMUST00000009667 Supt5hO55201 1082 aaKnown RBP18.28■□□□□ 0.52
Ush1c-201ENSMUST00000009667 Cngb1E1AZ71 1325 aa18.21■□□□□ 0.51
Ush1c-201ENSMUST00000009667 Zeb1Q64318 1117 aa18.17■□□□□ 0.5
Ush1c-201ENSMUST00000009667 Kdm5dQ62240 1548 aa18.09■□□□□ 0.49
Ush1c-201ENSMUST00000009667 Baz1aO88379 1555 aa18.09■□□□□ 0.49
Ush1c-201ENSMUST00000009667 Chic1Q8CBW7 227 aa18.07■□□□□ 0.48
Ush1c-201ENSMUST00000009667 Cep164Q5DU05 1446 aa17.92■□□□□ 0.46
Ush1c-201ENSMUST00000009667 Neurod1Q60867 357 aa17.87■□□□□ 0.45
Ush1c-201ENSMUST00000009667 Mier1Q5UAK0 511 aa17.82■□□□□ 0.44
Ush1c-201ENSMUST00000009667 Rsf1E9PWW9 1441 aaKnown RBP17.81■□□□□ 0.44
Ush1c-201ENSMUST00000009667 NacadQ5SWP3 1504 aa17.76■□□□□ 0.43
Ush1c-201ENSMUST00000009667 Ppargc1bQ8VHJ7 1014 aa17.75■□□□□ 0.43
Ush1c-201ENSMUST00000009667 Esf1Q3V1V3 845 aaKnown RBP17.74■□□□□ 0.43
Ush1c-201ENSMUST00000009667 Sall2Q9QX96 1004 aa17.69■□□□□ 0.42
Ush1c-201ENSMUST00000009667 Smarca2Q6DIC0 1577 aa17.68■□□□□ 0.42
Ush1c-201ENSMUST00000009667 Ccdc88bQ4QRL3 1481 aa17.68■□□□□ 0.42
Ush1c-201ENSMUST00000009667 UbtfP25976 765 aaKnown RBP17.67■□□□□ 0.42
Ush1c-201ENSMUST00000009667 Wdr66E9Q743 1299 aa17.6■□□□□ 0.41
Ush1c-201ENSMUST00000009667 Cecr2E9Q2Z1 1453 aa17.56■□□□□ 0.4
Ush1c-201ENSMUST00000009667 NefmP08553 848 aa17.55■□□□□ 0.4
Ush1c-201ENSMUST00000009667 Myt1lP97500 1187 aa17.55■□□□□ 0.4
Ush1c-201ENSMUST00000009667 Aebp2Q9Z248 504 aaKnown RBP17.46■□□□□ 0.38
Ush1c-201ENSMUST00000009667 Brd4Q9ESU6 1400 aaKnown RBP17.43■□□□□ 0.38
Ush1c-201ENSMUST00000009667 Golga3P55937 1487 aa17.4■□□□□ 0.38
Ush1c-201ENSMUST00000009667 Sycp2Q9CUU3 1500 aa17.38■□□□□ 0.37
Ush1c-201ENSMUST00000009667 Csrnp3P59055 597 aa17.37■□□□□ 0.37
Ush1c-201ENSMUST00000009667 Crybg2B7ZCC2 1516 aa17.36■□□□□ 0.37
Ush1c-201ENSMUST00000009667 Synj1Q8CHC4 1574 aa17.34■□□□□ 0.37
Ush1c-201ENSMUST00000009667 Las1lA2BE28 776 aaKnown RBP17.32■□□□□ 0.36
Ush1c-201ENSMUST00000009667 Gm38655A0A286YDK6 273 aa17.28■□□□□ 0.36
Ush1c-201ENSMUST00000009667 Npm2Q80W85 207 aa17.26■□□□□ 0.35
Ush1c-201ENSMUST00000009667 Plekhg3Q4VAC9 1341 aa17.25■□□□□ 0.35
Ush1c-201ENSMUST00000009667 1700123L14RikQ3V2K7 440 aa17.23■□□□□ 0.35
Ush1c-201ENSMUST00000009667 Nop58Q6DFW4 536 aaKnown RBP17.16■□□□□ 0.34
Ush1c-201ENSMUST00000009667 CftrP26361 1476 aa17.14■□□□□ 0.33
Ush1c-201ENSMUST00000009667 Cdk11bP24788 784 aaKnown RBP17.13■□□□□ 0.33
Ush1c-201ENSMUST00000009667 Anks4bQ8K3X6 423 aa17.13■□□□□ 0.33
Ush1c-201ENSMUST00000009667 Ap3b1Q9Z1T1 1105 aa17.11■□□□□ 0.33
Ush1c-201ENSMUST00000009667 Eid3Q3V124 375 aa17.08■□□□□ 0.32
Ush1c-201ENSMUST00000009667 Cc2d2aQ8CFW7 1633 aa17.07■□□□□ 0.32
Ush1c-201ENSMUST00000009667 TonslQ6NZL6 1363 aa17.05■□□□□ 0.32
Ush1c-201ENSMUST00000009667 ClspnQ80YR7 1315 aa17.04■□□□□ 0.32
Ush1c-201ENSMUST00000009667 BicraF8VPZ9 1578 aa17.04■□□□□ 0.32
Ush1c-201ENSMUST00000009667 Mapk8ip2Q9ERE9 830 aa17.02■□□□□ 0.32
Ush1c-201ENSMUST00000009667 Il27Q8K3I6 234 aa17■□□□□ 0.31
Ush1c-201ENSMUST00000009667 Rapgef2Q8CHG7 1496 aa16.98■□□□□ 0.31
Ush1c-201ENSMUST00000009667 Clip1Q922J3 1391 aa16.94■□□□□ 0.3
Ush1c-201ENSMUST00000009667 Top2bQ64511 1612 aa16.94■□□□□ 0.3
Ush1c-201ENSMUST00000009667 Cep162Q6ZQ06 1403 aa16.94■□□□□ 0.3
Ush1c-201ENSMUST00000009667 Cttnbp2B9EJA2 1648 aa16.85■□□□□ 0.29
Ush1c-201ENSMUST00000009667 Fmn1Q05860 1466 aa16.78■□□□□ 0.28
Ush1c-201ENSMUST00000009667 SafbD3YXK2 937 aaKnown RBP16.76■□□□□ 0.27
Ush1c-201ENSMUST00000009667 Top2aQ01320 1528 aaKnown RBP16.75■□□□□ 0.27
Ush1c-201ENSMUST00000009667 Smarca4Q3TKT4 1613 aaKnown RBP16.72■□□□□ 0.27
Ush1c-201ENSMUST00000009667 Fam50aQ9WV03 339 aaKnown RBP16.71■□□□□ 0.27
Ush1c-201ENSMUST00000009667 CenpbP27790 599 aa16.71■□□□□ 0.27
Ush1c-201ENSMUST00000009667 Hnrnpul2Q00PI9 745 aaKnown RBP16.7■□□□□ 0.26
Ush1c-201ENSMUST00000009667 Aplp2Q06335 707 aa16.7■□□□□ 0.26
Ush1c-201ENSMUST00000009667 Lmod2Q3UHZ5 550 aa16.7■□□□□ 0.26
Ush1c-201ENSMUST00000009667 Ncapd3Q6ZQK0 1506 aa16.62■□□□□ 0.25
Ush1c-201ENSMUST00000009667 PtprkP35822 1457 aa16.6■□□□□ 0.25
Ush1c-201ENSMUST00000009667 NclP09405 707 aaKnown RBP16.59■□□□□ 0.25
Ush1c-201ENSMUST00000009667 Slc24a1Q91WD8 1130 aa16.59■□□□□ 0.25
Ush1c-201ENSMUST00000009667 Setd5Q5XJV7 1441 aa16.58■□□□□ 0.24
Ush1c-201ENSMUST00000009667 Iqgap2Q3UQ44 1575 aa16.54■□□□□ 0.24
Ush1c-201ENSMUST00000009667 Arap1Q4LDD4 1452 aa16.53■□□□□ 0.24
Ush1c-201ENSMUST00000009667 Arhgap35Q91YM2 1499 aa16.51■□□□□ 0.23
Ush1c-201ENSMUST00000009667 Ube2uB1AUC4 352 aa16.51■□□□□ 0.23
Ush1c-201ENSMUST00000009667 Eea1Q8BL66 1411 aa16.51■□□□□ 0.23
Ush1c-201ENSMUST00000009667 BlmO88700 1416 aa16.5■□□□□ 0.23
Ush1c-201ENSMUST00000009667 Fam71e1A1L3C1 212 aa16.5■□□□□ 0.23
Ush1c-201ENSMUST00000009667 Kif15Q6P9L6 1387 aa16.44■□□□□ 0.22
Ush1c-201ENSMUST00000009667 Hspa5P20029 655 aaKnown RBP16.43■□□□□ 0.22
Ush1c-201ENSMUST00000009667 AqrQ8CFQ3 1481 aaKnown RBP16.39■□□□□ 0.21
Ush1c-201ENSMUST00000009667 Eif4g1Q6NZJ6 1600 aaKnown RBP16.39■□□□□ 0.21
Ush1c-201ENSMUST00000009667 Sin3aQ60520 1274 aaKnown RBP16.37■□□□□ 0.21
Ush1c-201ENSMUST00000009667 Chic2Q9D9G3 165 aa16.33■□□□□ 0.21
Ush1c-201ENSMUST00000009667 Arhgef5E9Q7D5 1581 aa16.33■□□□□ 0.2
Ush1c-201ENSMUST00000009667 Baz1bQ9Z277 1479 aa16.32■□□□□ 0.2
Ush1c-201ENSMUST00000009667 Rpap1Q80TE0 1409 aa16.3■□□□□ 0.2
Ush1c-201ENSMUST00000009667 Atad2bE9Q166 1460 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms