RNA–Protein interactions for RNA: ENSMUST00000000776.14

Tubgcp3-201, Transcript of Gamma-tubulin complex component 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubgcp3, Length 3,797 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3-201ENSMUST00000000776 NischQ80TM9 1593 aa23.91■■□□□ 1.42
Tubgcp3-201ENSMUST00000000776 Gm35339A0A140LHH9 1649 aa22.98■■□□□ 1.27
Tubgcp3-201ENSMUST00000000776 Abcc9P70170 1546 aa22.97■■□□□ 1.27
Tubgcp3-201ENSMUST00000000776 Rhox8Q6VSS7 320 aa22.95■■□□□ 1.26
Tubgcp3-201ENSMUST00000000776 Abcc8B2RUS7 1588 aa22.61■■□□□ 1.21
Tubgcp3-201ENSMUST00000000776 Rpgrip1Q9EPQ2 1331 aa21.23■□□□□ 0.99
Tubgcp3-201ENSMUST00000000776 Ccdc136Q3TVA9 1136 aa21.22■□□□□ 0.99
Tubgcp3-201ENSMUST00000000776 ScribQ80U72 1612 aa21.12■□□□□ 0.97
Tubgcp3-201ENSMUST00000000776 Rtl1Q7M732 1744 aa20.96■□□□□ 0.95
Tubgcp3-201ENSMUST00000000776 Rb1cc1Q9ESK9 1588 aa20.93■□□□□ 0.94
Tubgcp3-201ENSMUST00000000776 Kdm5dQ62240 1548 aa20.87■□□□□ 0.93
Tubgcp3-201ENSMUST00000000776 Dcaf1Q80TR8 1506 aa20.8■□□□□ 0.92
Tubgcp3-201ENSMUST00000000776 NacadQ5SWP3 1504 aa20.77■□□□□ 0.92
Tubgcp3-201ENSMUST00000000776 Zcchc6Q5BLK4 1491 aaKnown RBP20.76■□□□□ 0.91
Tubgcp3-201ENSMUST00000000776 Ccdc180J3QNE4 1664 aa20.76■□□□□ 0.91
Tubgcp3-201ENSMUST00000000776 Baz1aO88379 1555 aa20.57■□□□□ 0.88
Tubgcp3-201ENSMUST00000000776 Trim41Q5NCC3 630 aa20.51■□□□□ 0.87
Tubgcp3-201ENSMUST00000000776 Acin1Q9JIX8 1338 aaKnown RBP20.39■□□□□ 0.85
Tubgcp3-201ENSMUST00000000776 Cngb1E1AZ71 1325 aa20.36■□□□□ 0.85
Tubgcp3-201ENSMUST00000000776 Esf1Q3V1V3 845 aaKnown RBP20.28■□□□□ 0.84
Tubgcp3-201ENSMUST00000000776 Sycp2Q9CUU3 1500 aa20.26■□□□□ 0.83
Tubgcp3-201ENSMUST00000000776 Ehmt2Q9Z148 1263 aaKnown RBP20.23■□□□□ 0.83
Tubgcp3-201ENSMUST00000000776 Pcgf6Q99NA9 353 aa20.2■□□□□ 0.82
Tubgcp3-201ENSMUST00000000776 HrcG5E8J6 738 aa20.15■□□□□ 0.82
Tubgcp3-201ENSMUST00000000776 Gab3Q8BSM5 595 aa20.05■□□□□ 0.8
Tubgcp3-201ENSMUST00000000776 Crybg2B7ZCC2 1516 aa20.03■□□□□ 0.8
Tubgcp3-201ENSMUST00000000776 Smarca2Q6DIC0 1577 aa19.98■□□□□ 0.79
Tubgcp3-201ENSMUST00000000776 Brd4Q9ESU6 1400 aaKnown RBP19.89■□□□□ 0.77
Tubgcp3-201ENSMUST00000000776 Cecr2E9Q2Z1 1453 aa19.88■□□□□ 0.77
Tubgcp3-201ENSMUST00000000776 Chic1Q8CBW7 227 aa19.76■□□□□ 0.75
Tubgcp3-201ENSMUST00000000776 BicraF8VPZ9 1578 aa19.75■□□□□ 0.75
Tubgcp3-201ENSMUST00000000776 Las1lA2BE28 776 aaKnown RBP19.68■□□□□ 0.74
Tubgcp3-201ENSMUST00000000776 Supt5hO55201 1082 aaKnown RBP19.6■□□□□ 0.73
Tubgcp3-201ENSMUST00000000776 Synj1Q8CHC4 1574 aa19.55■□□□□ 0.72
Tubgcp3-201ENSMUST00000000776 Cep164Q5DU05 1446 aa19.55■□□□□ 0.72
Tubgcp3-201ENSMUST00000000776 Golga3P55937 1487 aa19.53■□□□□ 0.72
Tubgcp3-201ENSMUST00000000776 CftrP26361 1476 aa19.51■□□□□ 0.71
Tubgcp3-201ENSMUST00000000776 Rsf1E9PWW9 1441 aaKnown RBP19.5■□□□□ 0.71
Tubgcp3-201ENSMUST00000000776 Neurod1Q60867 357 aa19.49■□□□□ 0.71
Tubgcp3-201ENSMUST00000000776 Myt1lP97500 1187 aa19.46■□□□□ 0.71
Tubgcp3-201ENSMUST00000000776 Il27Q8K3I6 234 aa19.45■□□□□ 0.7
Tubgcp3-201ENSMUST00000000776 Npm2Q80W85 207 aa19.44■□□□□ 0.7
Tubgcp3-201ENSMUST00000000776 Ccdc88bQ4QRL3 1481 aa19.42■□□□□ 0.7
Tubgcp3-201ENSMUST00000000776 Smarca4Q3TKT4 1613 aaKnown RBP19.37■□□□□ 0.69
Tubgcp3-201ENSMUST00000000776 Pds5bQ4VA53 1446 aaKnown RBP19.27■□□□□ 0.67
Tubgcp3-201ENSMUST00000000776 Cttnbp2B9EJA2 1648 aa19.25■□□□□ 0.67
Tubgcp3-201ENSMUST00000000776 Zeb1Q64318 1117 aa19.24■□□□□ 0.67
Tubgcp3-201ENSMUST00000000776 Atad2bE9Q166 1460 aaKnown RBP19.22■□□□□ 0.67
Tubgcp3-201ENSMUST00000000776 Iqgap2Q3UQ44 1575 aa19.19■□□□□ 0.66
Tubgcp3-201ENSMUST00000000776 CenpbP27790 599 aa19.14■□□□□ 0.66
Tubgcp3-201ENSMUST00000000776 Myt1Q8CFC2 1127 aa19.07■□□□□ 0.64
Tubgcp3-201ENSMUST00000000776 UbtfP25976 765 aaKnown RBP19.06■□□□□ 0.64
Tubgcp3-201ENSMUST00000000776 1700123L14RikQ3V2K7 440 aa19.05■□□□□ 0.64
Tubgcp3-201ENSMUST00000000776 Ercc6F8VPZ5 1481 aa19.04■□□□□ 0.64
Tubgcp3-201ENSMUST00000000776 Ubl4bQ9CQ84 188 aa19.02■□□□□ 0.64
Tubgcp3-201ENSMUST00000000776 Kif15Q6P9L6 1387 aa19.01■□□□□ 0.63
Tubgcp3-201ENSMUST00000000776 Fmn1Q05860 1466 aa19■□□□□ 0.63
Tubgcp3-201ENSMUST00000000776 Cc2d2aQ8CFW7 1633 aa18.99■□□□□ 0.63
Tubgcp3-201ENSMUST00000000776 Csrnp3P59055 597 aa18.94■□□□□ 0.62
Tubgcp3-201ENSMUST00000000776 Npm1Q61937 292 aaKnown RBP18.94■□□□□ 0.62
Tubgcp3-201ENSMUST00000000776 Top2bQ64511 1612 aa18.93■□□□□ 0.62
Tubgcp3-201ENSMUST00000000776 Ap3b1Q9Z1T1 1105 aa18.92■□□□□ 0.62
Tubgcp3-201ENSMUST00000000776 Frmpd1A2AKB4 1549 aa18.88■□□□□ 0.61
Tubgcp3-201ENSMUST00000000776 Anks4bQ8K3X6 423 aa18.85■□□□□ 0.61
Tubgcp3-201ENSMUST00000000776 Plekhg3Q4VAC9 1341 aa18.81■□□□□ 0.6
Tubgcp3-201ENSMUST00000000776 NefmP08553 848 aa18.8■□□□□ 0.6
Tubgcp3-201ENSMUST00000000776 Mier1Q5UAK0 511 aa18.8■□□□□ 0.6
Tubgcp3-201ENSMUST00000000776 DiexfQ8BTT6 772 aaKnown RBP18.79■□□□□ 0.6
Tubgcp3-201ENSMUST00000000776 Sall2Q9QX96 1004 aa18.78■□□□□ 0.6
Tubgcp3-201ENSMUST00000000776 Wdr62Q3U3T8 1523 aa18.76■□□□□ 0.59
Tubgcp3-201ENSMUST00000000776 Rapgef2Q8CHG7 1496 aa18.74■□□□□ 0.59
Tubgcp3-201ENSMUST00000000776 Cep162Q6ZQ06 1403 aa18.74■□□□□ 0.59
Tubgcp3-201ENSMUST00000000776 Wdr66E9Q743 1299 aa18.71■□□□□ 0.59
Tubgcp3-201ENSMUST00000000776 Clip1Q922J3 1391 aa18.71■□□□□ 0.59
Tubgcp3-201ENSMUST00000000776 Phldb1Q6PDH0 1371 aaKnown RBP18.71■□□□□ 0.59
Tubgcp3-201ENSMUST00000000776 Top2aQ01320 1528 aaKnown RBP18.7■□□□□ 0.58
Tubgcp3-201ENSMUST00000000776 Ccdc18Q640L5 1455 aa18.67■□□□□ 0.58
Tubgcp3-201ENSMUST00000000776 Cux2P70298 1426 aa18.65■□□□□ 0.58
Tubgcp3-201ENSMUST00000000776 Aplp2Q06335 707 aa18.64■□□□□ 0.58
Tubgcp3-201ENSMUST00000000776 Cdk11bP24788 784 aaKnown RBP18.62■□□□□ 0.57
Tubgcp3-201ENSMUST00000000776 Lmod2Q3UHZ5 550 aa18.55■□□□□ 0.56
Tubgcp3-201ENSMUST00000000776 Gm38655A0A286YDK6 273 aa18.54■□□□□ 0.56
Tubgcp3-201ENSMUST00000000776 Nop58Q6DFW4 536 aaKnown RBP18.53■□□□□ 0.56
Tubgcp3-201ENSMUST00000000776 PtprkP35822 1457 aa18.52■□□□□ 0.56
Tubgcp3-201ENSMUST00000000776 Dnajc5bQ9CQ94 199 aa18.51■□□□□ 0.55
Tubgcp3-201ENSMUST00000000776 Setd5Q5XJV7 1441 aa18.49■□□□□ 0.55
Tubgcp3-201ENSMUST00000000776 Lamc3Q9R0B6 1581 aa18.47■□□□□ 0.55
Tubgcp3-201ENSMUST00000000776 Eea1Q8BL66 1411 aa18.41■□□□□ 0.54
Tubgcp3-201ENSMUST00000000776 LrpprcQ6PB66 1392 aaKnown RBP18.4■□□□□ 0.54
Tubgcp3-201ENSMUST00000000776 Baz1bQ9Z277 1479 aa18.4■□□□□ 0.54
Tubgcp3-201ENSMUST00000000776 Bcl11aQ9QYE3 773 aa18.4■□□□□ 0.54
Tubgcp3-201ENSMUST00000000776 Camsap1A2AHC3 1581 aa18.4■□□□□ 0.54
Tubgcp3-201ENSMUST00000000776 Fam50aQ9WV03 339 aaKnown RBP18.39■□□□□ 0.54
Tubgcp3-201ENSMUST00000000776 TnnQ80Z71 1560 aa18.38■□□□□ 0.53
Tubgcp3-201ENSMUST00000000776 Arhgap35Q91YM2 1499 aa18.37■□□□□ 0.53
Tubgcp3-201ENSMUST00000000776 Shroom4Q1W617 1475 aa18.36■□□□□ 0.53
Tubgcp3-201ENSMUST00000000776 Ube2uB1AUC4 352 aa18.35■□□□□ 0.53
Tubgcp3-201ENSMUST00000000776 Ppargc1bQ8VHJ7 1014 aa18.35■□□□□ 0.53
Tubgcp3-201ENSMUST00000000776 Grin2bQ01097 1482 aa18.33■□□□□ 0.53
Tubgcp3-201ENSMUST00000000776 Thoc2B1AZI6 1594 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms