RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 ZFAND2BQ8WV99 257 aa17.31■□□□□ 0.36
SNED1-204ENST00000401884 TRIB2Q92519 343 aa17.31■□□□□ 0.36
SNED1-204ENST00000401884 EXOSC8Q96B26 276 aaKnown RBP17.31■□□□□ 0.36
SNED1-204ENST00000401884 SERHL2Q9H4I8 314 aa17.31■□□□□ 0.36
SNED1-204ENST00000401884 SYNDIG1Q9H7V2 258 aa17.31■□□□□ 0.36
SNED1-204ENST00000401884 SERHLQ9NQF3 203 aa17.31■□□□□ 0.36
SNED1-204ENST00000401884 COL22A1Q8NFW1 1626 aaPredicted RBP17.31■□□□□ 0.36
SNED1-204ENST00000401884 AP3D1O14617 1153 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 TLL1O43897 1013 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 GALTP07902 379 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 CASP9P55211 416 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 TUBA4AP68366 448 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 OGFRL1Q5TC84 451 aaPredicted RBP17.3■□□□□ 0.36
SNED1-204ENST00000401884 VN1R5Q7Z5H4 357 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 RAD51AP1Q96B01 352 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 COX4I2Q96KJ9 171 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 FBXO10Q9UK96 956 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 FADS2P1A8MWK0 482 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 COCHO43405 550 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 SEPHS1P49903 392 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 BNIP3Q12983 259 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 LAPTM5Q13571 262 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 BEND5Q7L4P6 421 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 SCD5Q86SK9 330 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 ZNF598Q86UK7 904 aaKnown RBP17.3■□□□□ 0.36
SNED1-204ENST00000401884 CXCL16Q9H2A7 254 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 NCKAP1Q9Y2A7 1128 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 ASB3Q9Y575 518 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 DOCK2Q92608 1830 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 TPP2P29144 1249 aaPredicted RBP17.3■□□□□ 0.36
SNED1-204ENST00000401884 GKP32189 559 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 HNMTP50135 292 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 RFTN2Q52LD8 501 aaPredicted RBP17.3■□□□□ 0.36
SNED1-204ENST00000401884 PDCD4Q53EL6 469 aaKnown RBP17.3■□□□□ 0.36
SNED1-204ENST00000401884 CMPK2Q5EBM0 449 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 CEP78Q5JTW2 689 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 DENND5AQ6IQ26 1287 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 Q6ZVU0 165 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 SYVN1Q86TM6 617 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 SSR3Q9UNL2 185 aa17.3■□□□□ 0.36
SNED1-204ENST00000401884 MANBAO00462 879 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 EBLN1P0CF75 366 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 IL12AP29459 219 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 TLE2Q04725 743 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 IFI44LQ53G44 452 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 PSAPL1Q6NUJ1 521 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 GTPBP3Q969Y2 492 aaKnown RBP17.29■□□□□ 0.36
SNED1-204ENST00000401884 CHCHD6Q9BRQ6 235 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 GTF2A1LQ9UNN4 478 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 SLX4Q8IY92 1834 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 AIREO43918 545 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 ENGP17813 658 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 FMO3P31513 532 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 ACVR1CQ8NER5 493 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 ING5Q8WYH8 240 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 CXorf40BQ96DE9 158 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 COPS4Q9BT78 406 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 CREG1O75629 220 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 NPPAP01160 153 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 PRKACGP22612 351 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 PAQR9Q6ZVX9 377 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
SNED1-204ENST00000401884 TMEM175Q9BSA9 504 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 OAZ2O95190 189 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 CYP11A1P05108 521 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 BMP7P18075 431 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 ALDH3A2P51648 485 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 ARSFP54793 590 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 ABHD18Q0P651 414 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 OR4D1Q15615 310 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 FAM171BQ6P995 826 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 BEND7Q8N7W2 519 aaPredicted RBP17.29■□□□□ 0.36
SNED1-204ENST00000401884 KHSRPQ92945 711 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNED1-204ENST00000401884 MRPL48Q96GC5 212 aaKnown RBP17.29■□□□□ 0.36
SNED1-204ENST00000401884 SLC29A3Q9BZD2 475 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 KAT8Q9H7Z6 458 aaKnown RBP17.29■□□□□ 0.36
SNED1-204ENST00000401884 TRNAU1APQ9NX07 287 aaKnown RBP17.29■□□□□ 0.36
SNED1-204ENST00000401884 GLI3P10071 1580 aa17.29■□□□□ 0.36
SNED1-204ENST00000401884 CENPXA8MT69 81 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 UGT2B17O75795 530 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 FDXRP22570 491 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 CAP1Q01518 475 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 TRIM32Q13049 653 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 LRRC66Q68CR7 880 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 GDPD4Q6W3E5 623 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 HTRA1Q92743 480 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 NDEL1Q9GZM8 345 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 A6NHS1 94 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 PI15O43692 258 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 DYRK3O43781 588 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 PCDH7O60245 1069 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 EPHX1P07099 455 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 WASP42768 502 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 SF1Q15637 639 aaKnown RBP17.28■□□□□ 0.36
SNED1-204ENST00000401884 OR2T5Q6IEZ7 315 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 UTS2BQ765I0 119 aa17.28■□□□□ 0.36
SNED1-204ENST00000401884 CHST15Q7LFX5 561 aaPredicted RBP17.28■□□□□ 0.36
SNED1-204ENST00000401884 OR2T29Q8NH02 315 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms