RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PCDH17O14917 1159 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 HOXC11O43248 304 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 AQP9O43315 295 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATP2C2O75185 946 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 PSIP1O75475 530 aaKnown RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 CLN5O75503 358 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 KRT34O76011 436 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 IGKV5-2P06315 115 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCNB1P14635 433 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 CPA1P15085 419 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM11P17152 192 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 JAK1P23458 1154 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 HLA-FP30511 346 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 STAT1P42224 750 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 POLGP54098 1239 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 HADHBP55084 474 aaKnown RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 TSPAN5P62079 268 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 CFHR1Q03591 330 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ITPK1Q13572 414 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 RPS6KA2Q15349 733 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC15A2Q16348 729 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 PFKFB4Q16877 469 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 AAK1Q2M2I8 961 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 SMU1Q2TAY7 513 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF829Q3KNS6 432 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 EARS2Q5JPH6 523 aaKnown RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 GRTP1Q5TC63 336 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 LIPMQ5VYY2 423 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 PLEKHA7Q6IQ23 1121 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF425Q6IV72 752 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 NFRKBQ6P4R8 1299 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 CNSTQ6PJW8 725 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 DHRS13Q6UX07 377 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 KYAT3Q6YP21 454 aaKnown RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 LDHAL6AQ6ZMR3 332 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF793Q6ZN11 406 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 USP43Q70EL4 1123 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 LPCAT2Q7L5N7 544 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 C1QL2Q7Z5L3 287 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 GPR142Q7Z601 462 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ERI1Q8IV48 349 aaKnown RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 NELFCDQ8IXH7 590 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 KIAA2013Q8IYS2 634 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ADGRF4Q8IZF3 695 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ADSSL1Q8N142 457 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 LIX1Q8N485 282 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 KBTBD3Q8NAB2 608 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 SPATA5Q8NB90 893 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF680Q8NEM1 530 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 OMA1Q96E52 524 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCDC51Q96ER9 411 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRR11Q96HE9 360 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 SERPINB12Q96P63 405 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 FCRL4Q96PJ5 515 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 RANBP9Q96S59 729 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 NEURL2Q9BR09 285 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZPBPQ9BS86 351 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 RTKNQ9BST9 563 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ABHD14AQ9BUJ0 271 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 KATNAL1Q9BW62 490 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 TEX13BQ9BXU2 312 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 OR2B2Q9GZK3 357 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 CLPBQ9H078 707 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 Q9H521 79 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 HPF1Q9NWY4 346 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 DACT1Q9NYF0 836 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 RNF7Q9UBF6 113 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 DNAJB4Q9UDY4 337 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 RSL24D1Q9UHA3 163 aaKnown RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRMT112Q9UI30 125 aaKnown RBP4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 MAD1L1Q9Y6D9 718 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 UMODL1Q5DID0 1318 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 C15orf38-AP3S2A0A0A6YYH1 394 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 OR5K3A6NET4 321 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 LRRIQ4A6NIV6 560 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MBD3L5A6NJ08 208 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLCO1B7G3V0H7 640 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 H3BNX3 289 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 L7N2F9 121 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF701M0R085 212 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TP73O15350 636 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 KCNN4O15554 427 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 DHHO43323 396 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 DNPH1O43598 174 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 ASNA1O43681 348 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 NOS1APO75052 506 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 PEX11AO75192 247 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 LRP6O75581 1613 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRMUO75648 421 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RSL1D1O76021 490 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CIAO1O76071 339 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CAMTA2O94983 1202 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CER1O95813 267 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TFRCP02786 760 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 IL6P05231 212 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 HEXBP07686 556 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CYP3A5P20815 502 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MRC1P22897 1456 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TCEA1P23193 301 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 F8A1P23610 371 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms