RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 KRT222Q8N1A0 295 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 PHC3Q8NDX5 983 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 KIF18AQ8NI77 898 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 SNIP1Q8TAD8 396 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 LCN9Q8WX39 176 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 C9orf72Q96LT7 481 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 TGM7Q96PF1 710 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 TFB2MQ9H5Q4 396 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 HRASLS2Q9NWW9 162 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 ZC3H7BQ9UGR2 993 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 KLHL3Q9UH77 587 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 CRYL1Q9Y2S2 319 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 PCDHGA7Q9Y5G6 932 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 MRFAP1Q9Y605 127 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 COMMD10Q9Y6G5 202 aa16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 MN1Q10571 1320 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-212ENST00000596163 IQCF5A8MTL0 148 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 E5RI56 91 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 MATN2O00339 956 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 SLCO2B1O94956 709 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 S1PR4O95977 384 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 ACADLP28330 430 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 MAPK10P53779 464 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 CSE1LP55060 971 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 PCBP4P57723 403 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 CTBP1Q13363 440 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 HSP90AA5PQ58FG0 334 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 DUPD1Q68J44 220 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 TTC23LQ6PF05 361 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 NAPRTQ6XQN6 538 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 LRRC69Q6ZNQ3 347 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 UNC13CQ8NB66 2214 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 ZNF248Q8NDW4 579 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 RSC1A1Q92681 617 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 BIRC8Q96P09 236 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 CD180Q99467 661 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 DPH5Q9H2P9 285 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 SRMSQ9H3Y6 488 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 ASCL3Q9NQ33 180 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 IARS2Q9NSE4 1012 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 IL1RAPL1Q9NZN1 696 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 FBXO5Q9UKT4 447 aa16.83■□□□□ 0.28
SHKBP1-212ENST00000596163 OR6C74A6NCV1 312 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 OR5K3A6NET4 321 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 CDRT15L2A8MXV6 281 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 B4E171 279 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 BHMG1C9JSJ3 638 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 TAF4O00268 1085 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 EIF3HO15372 352 aaKnown RBP eCLIP16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 NVLO15381 856 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 RASSF9O75901 435 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 HGFP14210 728 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 TSPAN7P41732 249 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 MRPS25P82663 173 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 PDIA2Q13087 525 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 CBLBQ13191 982 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 CTSL3PQ5NE16 218 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 CACHD1Q5VU97 1274 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 KIAA0408Q6ZU52 694 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 PRSS42Q7Z5A4 293 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 CLEC14AQ86T13 490 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 DENND6AQ8IWF6 608 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 OR4E2Q8NGC2 313 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 OR5K2Q8NHB8 316 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 LKAAEAR1Q8TD35 194 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 JPH3Q8WXH2 748 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 UBXN4Q92575 508 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 FOPNLQ96NB1 174 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 TAAR9Q96RI9 348 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 ASPSCR1Q9BZE9 553 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 PPANQ9NQ55 473 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 LATS2Q9NRM7 1088 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 CHMP2BQ9UQN3 213 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 RAXQ9Y2V3 346 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 TEX264Q9Y6I9 313 aa16.82■□□□□ 0.28
SHKBP1-212ENST00000596163 SRRM3A6NNA2 597 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 EFCAB7A8K855 629 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 E7ESA3 106 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 AGRPO00253 132 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 BANF1O75531 89 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 CD82P27701 267 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 SLC1A2P43004 574 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 LEPRP48357 1165 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 GFERP55789 205 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 RAB15P59190 212 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 PRKG2Q13237 762 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 FRG1Q14331 258 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 TTLL9Q3SXZ7 439 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 DNTTIP2Q5QJE6 756 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 C8orf74Q6P047 294 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 CYB5D1Q6P9G0 228 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 UNC5DQ6UXZ4 953 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 UNC5AQ6ZN44 842 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 AMIGO1Q86WK6 493 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 FAM129CQ86XR2 697 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 IGDCC3Q8IVU1 814 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 CARFQ8N187 725 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 OR52E1Q8NGJ3 308 aa16.81■□□□□ 0.28
SHKBP1-212ENST00000596163 SKA2Q8WVK7 121 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms