RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 MAP2K6P52564 334 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SELENOVP59797 346 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 RPS21P63220 83 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 NOMO3P69849 1222 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SLC36A3Q495N2 470 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 DUPD1Q68J44 220 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SLC25A25Q6KCM7 469 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 UTS2BQ765I0 119 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF571Q7Z3V5 609 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ADCK2Q7Z695 626 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GPR180Q86V85 440 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 XYLT1Q86Y38 959 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 LIX1LQ8IVB5 337 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ARHGEF19Q8IW93 802 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 REXO1L1PQ8IX06 675 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 DCAF4L2Q8NA75 395 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SELENOMQ8WWX9 145 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 HAS1Q92839 578 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 BTF3L4Q96K17 158 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TEKT5Q96M29 485 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 P2RY13Q9BPV8 354 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TLR10Q9BXR5 811 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 RNPEPL1Q9HAU8 725 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ELOVL2Q9NXB9 296 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PRKAG3Q9UGI9 489 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 VWA7Q9Y334 891 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 NDUFB9Q9Y6M9 179 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF701M0R085 212 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TRIM38O00635 465 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CYB5BO43169 146 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CHP2O43745 196 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 OR10H2O60403 315 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PDE5AO76074 875 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 F2P00734 622 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 JCHAINP01591 159 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 DRD1P21728 446 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 KIR3DL1P43629 444 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 NOVP48745 357 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 LILRA4P59901 499 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 MPP1Q00013 466 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SLC7A5Q01650 507 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GNA12Q03113 381 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FUT2Q10981 343 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 NOMO1Q15155 1222 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF776Q68DI1 518 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF470Q6ECI4 717 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GRHL2Q6ISB3 625 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FUT10Q6P4F1 479 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 MBOAT1Q6ZNC8 495 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GLB1L2Q8IW92 636 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ATG16L2Q8NAA4 619 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GEMIN6Q8WXD5 167 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ELMO1Q92556 727 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 C1QTNF1Q9BXJ1 281 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 C11orf49Q9H6J7 331 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SMYD3Q9H7B4 428 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GLOD4Q9HC38 313 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 B4GALT7Q9UBV7 327 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SSR3Q9UNL2 185 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PRELID1Q9Y255 219 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 KCNU1A8MYU2 1149 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 H0YGN5 161 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PCDH8O95206 1070 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 UBL4AP11441 157 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CTNNB1P35222 781 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GRIA2P42262 883 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FMR1Q06787 632 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SEMA5AQ13591 1074 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CBWD6Q4V339 395 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GPAT3Q53EU6 434 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 MSANTD2Q6P1R3 559 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 RSPO2Q6UXX9 243 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SLITRK4Q8IW52 837 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 RHBDF1Q96CC6 855 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 HS6ST2Q96MM7 605 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TBCDQ9BTW9 1192 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 MINDY3Q9H8M7 445 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TMEM27Q9HBJ8 222 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 C1orf109Q9NX04 203 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 XKRYO14609 159 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SHOX2O60902 331 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 UGT2B17O75795 530 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CYC1P08574 325 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ARF4P18085 180 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CXCR3P49682 368 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SLC7A2P52569 658 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 LIMK2P53671 638 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 EEFSECP57772 596 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CNTN2Q02246 1040 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 DHCR24Q15392 516 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF423Q2M1K9 1284 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GTF2IRD2BQ6EKJ0 949 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 MFSD7Q6UXD7 560 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 LRRC74BQ6ZQY2 392 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GTF2IRD2Q86UP8 949 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GID4Q8IVV7 300 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ATAD1Q8NBU5 361 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 OR5L2Q8NGL0 311 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TM9SF4Q92544 642 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 NAT6Q93015 286 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms