RNA–Protein interactions for RNA: ENST00000609685.1

SUCO-208, Transcript of SUN domain containing ossification factor, human

TSL 2

Gene SUCO, Length 761 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUCO-208	ENST00000609685	SYNCRIP	O60506	623 aa	Known RBP	4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	BAIAP3	O94812	1187 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	GCNT3	O95395	438 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	TSHB	P01222	138 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	RB1	P06400	928 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	CLTB	P09497	229 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	ERVK-10	P10266	1014 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	PPIG	Q13427	754 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	ARHGAP11A	Q6P4F7	1023 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	GALNT5	Q7Z7M9	940 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	SCYL3	Q8IZE3	742 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	ADGRF2	Q8IZF7	708 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	DDO	Q99489	341 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	BARHL1	Q9BZE3	327 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	ADPRHL2	Q9NX46	363 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	ITIH6	Q6UXX5	1313 aa		4.09	□□□□□ -1.75
SUCO-208	ENST00000609685	PTP4A3	O75365	173 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	HOXC8	P31273	242 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	ARF3	P61204	181 aa	Predicted RBP	4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	ARF1	P84077	181 aa	Known RBP	4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	PPP2R2B	Q00005	443 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	AIMP2	Q13155	320 aa	Known RBP	4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	APLF	Q8IW19	511 aa	Predicted RBP	4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	MCEMP1	Q8IX19	187 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	TTC39C	Q8N584	583 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	TAS1R2	Q8TE23	839 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	SEMA4D	Q92854	862 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	SLC22A12	Q96S37	553 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	SRSF8	Q9BRL6	282 aa	Known RBP	4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	HGH1	Q9BTY7	390 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	ZHX3	Q9H4I2	956 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	DNAJC18	Q9H819	358 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	SLC52A3	Q9NQ40	469 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	MBNL1	Q9NR56	388 aa	Known RBP	4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	PTTG2	Q9NZH5	202 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	DNAJB4	Q9UDY4	337 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	EXO1	Q9UQ84	846 aa	Known RBP	4.08	□□□□□ -1.76
SUCO-208	ENST00000609685	C2CD2	Q9Y426	696 aa		4.08	□□□□□ -1.76
SUCO-208	ENST00000609685		A0A0G2JLW4	131 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685		A0A1W2PR77	199 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	DUXA	A6NLW8	204 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	NDUFS4	O43181	175 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	GPR137B	O60478	399 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	LDLR	P01130	860 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	PRSS56	P0CW18	603 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	IGHV4-38-2	P0DP08	117 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	GNAZ	P19086	355 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	CHRNB4	P30926	498 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	HADHA	P40939	763 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	GARS	P41250	739 aa	Known RBP	4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	DRG2	P55039	364 aa	Known RBP	4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	MFAP5	Q13361	173 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	C1orf122	Q6ZSJ8	110 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	TMEM190	Q8WZ59	177 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	PSD2	Q9BQI7	771 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	FSD1	Q9BTV5	496 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	MIOS	Q9NXC5	875 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	PNMA2	Q9UL42	364 aa		4.07	□□□□□ -1.76
SUCO-208	ENST00000609685	FLT1	P17948	1338 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	PTGES3L	E9PB15	166 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	CLIC2	O15247	247 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	CKMT2	P17540	419 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	CAPN3	P20807	821 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	NMBR	P28336	390 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	RXRG	P48443	463 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	HSD17B4	P51659	736 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	GNB1	P62873	340 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	MRPS5	P82675	430 aa	Known RBP	4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	PMP22	Q01453	160 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	KCNC3	Q14003	757 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	KLC3	Q6P597	504 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	C15orf39	Q6ZRI6	1047 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	FASTKD5	Q7L8L6	764 aa	Known RBP	4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	GPALPP1	Q8IXQ4	340 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	L3MBTL4	Q8NA19	623 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	OR2T12	Q8NG77	320 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	LRRC59	Q96AG4	307 aa	Known RBP	4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	SKA1	Q96BD8	255 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	SENP5	Q96HI0	755 aa	Predicted RBP	4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	CCDC34	Q96HJ3	373 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	SMARCAD1	Q9H4L7	1026 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	SLA2	Q9H6Q3	261 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	AMACR	Q9UHK6	382 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	PCDHGA5	Q9Y5G8	931 aa		4.06	□□□□□ -1.76
SUCO-208	ENST00000609685	AP3D1	O14617	1153 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	MITF	O75030	526 aa	Predicted RBP	4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	RSL1D1	O76021	490 aa	Known RBP	4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	SERPINB2	P05120	415 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	H1F0	P07305	194 aa	Known RBP	4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	CD48	P09326	243 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	RNF224	P0DH78	156 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	LIF	P15018	202 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	PRLR	P16471	622 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	CBL	P22681	906 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	ALDH4A1	P30038	563 aa		4.05	□□□□□ -1.76
SUCO-208	ENST00000609685	VEGFC	P49767	419 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms