RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 C3AR1Q16581 482 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 MOGAT2Q3SYC2 334 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 PRR30Q53SZ7 412 aaPredicted RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 ZNF667Q5HYK9 610 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 OLFML2AQ68BL7 652 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 HIST2H2BDQ6DRA6 164 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 FIP1L1Q6UN15 594 aaKnown RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 QSOX2Q6ZRP7 698 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 Q75L30 129 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 CEACAM19Q7Z692 300 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 PTAR1Q7Z6K3 402 aaPredicted RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 ADCK1Q86TW2 530 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 FMNL3Q8IVF7 1028 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 GPALPP1Q8IXQ4 340 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 ABHD12Q8N2K0 398 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 DNAJC22Q8N4W6 341 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 SLC5A8Q8N695 610 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 EMC1Q8N766 993 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 ZNF383Q8NA42 475 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 USP38Q8NB14 1042 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 NUP37Q8NFH4 326 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 OR2T11Q8NH01 316 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 ZNF519Q8TB69 540 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 PPP4R1Q8TF05 950 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 LRRC15Q8TF66 581 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 RUFY2Q8WXA3 655 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 NSL1Q96IY1 281 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 SLC45A3Q96JT2 553 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 HARBI1Q96MB7 349 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 PRICKLE1Q96MT3 831 aaPredicted RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 EYA3Q99504 573 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 TMEM47Q9BQJ4 181 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 HEMGNQ9BXL5 484 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 WDR12Q9GZL7 423 aaKnown RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 SLITRK2Q9H156 845 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 SIL1Q9H173 461 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 LTB4R2Q9NPC1 389 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 NLRC4Q9NPP4 1024 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 PANK4Q9NVE7 773 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 TAB2Q9NYJ8 693 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 OR14J1Q9UGF5 321 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 VSIG4Q9Y279 399 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 WDR37Q9Y2I8 494 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 ATRXP46100 2492 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 TEX13DA0A0J9YY54 714 aaPredicted RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 GOLGA6L10A0A0M3HER8 536 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 CCDC194A0A1B0GVG4 234 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 VWA3AA6NCI4 1184 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MSGN1A6NI15 193 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MPTX1A8MV57 137 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 USP17L23D6RBM5 183 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 DNM1LO00429 736 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 HAT1O14929 419 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 KLK10O43240 276 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MAGEC1O60732 1142 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 CSTBP04080 98 aaKnown RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 TK1P04183 234 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 URODP06132 367 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 HOXB5P09067 269 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 FDPSP14324 419 aaKnown RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 ATP6V1B1P15313 513 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 BCL3P20749 454 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 IL4RP24394 825 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 ADD2P35612 726 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MMP12P39900 470 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 GPD2P43304 727 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MAPK9P45984 424 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 NEK3P51956 506 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 THOP1P52888 689 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 CDH15P55291 814 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 TMEM50BP56557 158 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 HNRNPKP61978 463 aaKnown RBP eCLIP0.63□□□□□ -2.31
COPB1-212ENST00000534771 RPS18P62269 152 aaKnown RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 LGALS3BPQ08380 585 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 GPR17Q13304 367 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MTHFSDQ2M296 383 aaKnown RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 IL31Q6EBC2 164 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 LCN10Q6JVE6 187 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 XRRA1Q6P2D8 792 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 TMEM81Q6P7N7 255 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 BAIAP2L2Q6UXY1 529 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 KSR2Q6VAB6 950 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 Q6ZRP5 223 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 DPPA4Q7L190 304 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 SLC47A2Q86VL8 602 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 LACC1Q8IV20 430 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MARVELD2Q8N4S9 558 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 NIPA2Q8N8Q9 360 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 TYMSOSQ8TAI1 123 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 MIPOL1Q8TD10 442 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 KCNG4Q8TDN1 519 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 HSD17B8Q92506 261 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 DYRK2Q92630 601 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 IGSF8Q969P0 613 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 CENPTQ96BT3 561 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 PABPC5Q96DU9 382 aaKnown RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 C1orf147Q96MC9 270 aaPredicted RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 AGAP4Q96P64 663 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 SMC6Q96SB8 1091 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 ACOX2Q99424 681 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms