RNA–Protein interactions for RNA: ENST00000609685.1

SUCO-208, Transcript of SUN domain containing ossification factor, human

TSL 2

Gene SUCO, Length 761 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUCO-208	ENST00000609685	MTMR6	Q9Y217	621 aa		4.2	□□□□□ -1.74
SUCO-208	ENST00000609685	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.2	□□□□□ -1.74
SUCO-208	ENST00000609685	ANKRD66	B4E2M5	251 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	MAP2K7	O14733	419 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	EPB41L2	O43491	1005 aa	Known RBP	4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	BUD23	O43709	281 aa	Known RBP	4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	MBD4	O95243	580 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	HIST1H2AB	P04908	130 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	CFC1B	P0CG36	223 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	CFC1	P0CG37	223 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	HIST1H2AD	P20671	130 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	ACADL	P28330	430 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	CRIP2	P52943	208 aa	Predicted RBP	4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	MRGPRG-AS1	Q2M3A8	158 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	SARM1	Q6SZW1	724 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	HIST3H2A	Q7L7L0	130 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	EPHX4	Q8IUS5	362 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	PM20D2	Q8IYS1	436 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	GCSAM	Q8N6F7	178 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	TRPC4AP	Q8TEL6	797 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	POMGNT1	Q8WZA1	660 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	SMC6	Q96SB8	1091 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	MAP3K20	Q9NYL2	800 aa	Known RBP	4.19	□□□□□ -1.74
SUCO-208	ENST00000609685	KLHL9	Q9P2J3	617 aa		4.19	□□□□□ -1.74
SUCO-208	ENST00000609685		A0A087X0M5	115 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685		A0A1B0GX30	115 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	C5orf60	A6NFR6	353 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685		H3BQ06	376 aa	Predicted RBP	4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	TMEM178B	H3BS89	294 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	SMAD9	O15198	467 aa	Known RBP	4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	CTSV	O60911	334 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	PAK4	O96013	591 aa	Predicted RBP	4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	AMBP	P02760	352 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	LAMP2	P13473	410 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	CSF2RA	P15509	400 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	TMEM11	P17152	192 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	DCT	P40126	519 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	MLLT10	P55197	1068 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	ACVR2B	Q13705	512 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	EIF4A2	Q14240	407 aa	Known RBP	4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	RAB6C	Q53S08	254 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	ACSM2B	Q68CK6	577 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	HAUS3	Q68CZ6	603 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	ADAM5	Q6NVV9	412 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	CCDC190	Q86UF4	302 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	SLC5A8	Q8N695	610 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	RDM1	Q8NG50	284 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	GRAPL	Q8TC17	118 aa	Predicted RBP	4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	ABHD8	Q96I13	439 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	MPP4	Q96JB8	637 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	RAB6C	Q9H0N0	254 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	UPF2	Q9HAU5	1272 aa	Known RBP	4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	ZNF69	Q9UC07	566 aa		4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.18	□□□□□ -1.74
SUCO-208	ENST00000609685	PRKN	O60260	465 aa	Predicted RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	WISP2	O76076	250 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	PDE9A	O76083	593 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	BAG4	O95429	457 aa	Known RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	FGF5	P12034	268 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	RARG	P13631	454 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	ANXA7	P20073	488 aa	Known RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	NR2F2	P24468	414 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	ARL3	P36405	182 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	CTSC	P53634	463 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	PRAME	P78395	509 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	KRT32	Q14532	448 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	CCDC6	Q16204	474 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	PCGF3	Q3KNV8	242 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	ZSCAN23	Q3MJ62	389 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	SNX30	Q5VWJ9	437 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	JADE1	Q6IE81	842 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	SLC27A1	Q6PCB7	646 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	KLHL35	Q6PF15	583 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	PLXDC2	Q6UX71	529 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	NGEF	Q8N5V2	710 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	PAF1	Q8N7H5	531 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	HJURP	Q8NCD3	748 aa	Predicted RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	RBM15B	Q8NDT2	890 aa	Known RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	PPHLN1	Q8NEY8	458 aa	Known RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	ZNF501	Q96CX3	271 aa	Predicted RBP	4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	NEUROD6	Q96NK8	337 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	NCAPG	Q9BPX3	1015 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	SETD4	Q9NVD3	440 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685	KIAA1210	Q9ULL0	1709 aa		4.17	□□□□□ -1.74
SUCO-208	ENST00000609685		A0A0G2JNG1	304 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685		A8MZ25	164 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685		F5H0A9	414 aa	Predicted RBP	4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	OGG1	O15527	345 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	PLPP2	O43688	288 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	GPC4	O75487	556 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	SCGB1D1	O95968	90 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	ACTN1	P12814	892 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	MCC	P23508	829 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	HRH2	P25021	359 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	PPARG	P37231	505 aa	Predicted RBP	4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	GPR143	P51810	404 aa		4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	SET	Q01105	290 aa	Predicted RBP	4.16	□□□□□ -1.74
SUCO-208	ENST00000609685	DDX10	Q13206	875 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms