RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W DBP7P36120 742 aaKnown RBP11.95□□□□□ -0.5
MSF1YPR047W TRM11Q12463 433 aa11.95□□□□□ -0.5
MSF1YPR047W RKM4Q12504 494 aa11.95□□□□□ -0.5
MSF1YPR047W REG2P38232 338 aa11.94□□□□□ -0.5
MSF1YPR047W YMR321CQ04898 105 aa11.94□□□□□ -0.5
MSF1YPR047W AHC1Q12433 566 aa11.94□□□□□ -0.5
MSF1YPR047W GPT2P36148 743 aa11.94□□□□□ -0.5
MSF1YPR047W DAK1P54838 584 aaKnown RBP11.94□□□□□ -0.5
MSF1YPR047W ISA1Q07821 250 aaPredicted RBP11.94□□□□□ -0.5
MSF1YPR047W HIP1P06775 603 aa11.93□□□□□ -0.5
MSF1YPR047W HEM1P09950 548 aaPredicted RBP11.93□□□□□ -0.5
MSF1YPR047W SRP54P20424 541 aaKnown RBP11.93□□□□□ -0.5
MSF1YPR047W MSC7P38694 644 aa11.93□□□□□ -0.5
MSF1YPR047W CSM2P40465 213 aa11.93□□□□□ -0.5
MSF1YPR047W FMS1P50264 508 aa11.93□□□□□ -0.5
MSF1YPR047W LDB19Q12502 818 aa11.93□□□□□ -0.5
MSF1YPR047W RTP1Q12751 981 aa11.93□□□□□ -0.5
MSF1YPR047W YDR524C-BQ3E6R4 66 aa11.93□□□□□ -0.5
MSF1YPR047W PHR1P05066 565 aaKnown RBP RIP-Chip data11.92□□□□□ -0.5not detected
MSF1YPR047W SEC20P28791 383 aa11.92□□□□□ -0.5
MSF1YPR047W NDT80P38830 627 aa11.92□□□□□ -0.5
MSF1YPR047W LIF1P53150 421 aa11.92□□□□□ -0.5
MSF1YPR047W TFC6Q06339 672 aa11.92□□□□□ -0.5
MSF1YPR047W TY1B-AO13527 1196 aaKnown RBP11.91□□□□□ -0.5
MSF1YPR047W IMP2'P32351 346 aa11.91□□□□□ -0.5
MSF1YPR047W ALG2P43636 503 aa11.91□□□□□ -0.5
MSF1YPR047W MDM1Q01846 1127 aa11.91□□□□□ -0.5
MSF1YPR047W TPM1P17536 199 aaKnown RBP11.9□□□□□ -0.5
MSF1YPR047W GRS1P38088 690 aaKnown RBP11.9□□□□□ -0.5
MSF1YPR047W CIC1P38779 376 aaKnown RBP11.89□□□□□ -0.51
MSF1YPR047W EST2Q06163 884 aa11.88□□□□□ -0.51
MSF1YPR047W DSE3Q08729 430 aa11.88□□□□□ -0.51
MSF1YPR047W PEP3P27801 918 aa11.87□□□□□ -0.51
MSF1YPR047W FLR1P38124 548 aa11.87□□□□□ -0.51
MSF1YPR047W TPM2P40414 161 aa11.87□□□□□ -0.51
MSF1YPR047W CTR1P49573 406 aa11.87□□□□□ -0.51
MSF1YPR047W PTA1Q01329 785 aaPredicted RBP11.87□□□□□ -0.51
MSF1YPR047W VIP1Q06685 1146 aaKnown RBP11.87□□□□□ -0.51
MSF1YPR047W PGA3Q12746 312 aaKnown RBP11.87□□□□□ -0.51
MSF1YPR047W SNA3P14359 133 aa11.86□□□□□ -0.51
MSF1YPR047W RPL8AP17076 256 aaKnown RBP11.86□□□□□ -0.51
MSF1YPR047W VPS72Q03388 795 aa11.86□□□□□ -0.51
MSF1YPR047W ESF1Q06344 628 aaKnown RBP11.86□□□□□ -0.51
MSF1YPR047W YOR111WQ99210 232 aa11.86□□□□□ -0.51
MSF1YPR047W MAS2P11914 482 aa11.86□□□□□ -0.51
MSF1YPR047W PWP2P25635 923 aaKnown RBP11.86□□□□□ -0.51
MSF1YPR047W UGA4P32837 571 aa11.86□□□□□ -0.51
MSF1YPR047W YLR326WQ06170 240 aaKnown RBP11.86□□□□□ -0.51
MSF1YPR047W BRN1P38170 754 aa11.85□□□□□ -0.51
MSF1YPR047W MYO1P08964 1928 aa11.84□□□□□ -0.51
MSF1YPR047W FOL2P51601 243 aaKnown RBP11.84□□□□□ -0.51
MSF1YPR047W RNR3P21672 869 aaKnown RBP11.83□□□□□ -0.52
MSF1YPR047W POT1P27796 417 aaKnown RBP RIP-Chip data11.83□□□□□ -0.52not detected
MSF1YPR047W RPS7BP48164 190 aaKnown RBP11.83□□□□□ -0.52
MSF1YPR047W DUR3P33413 735 aa11.82□□□□□ -0.52
MSF1YPR047W UBP15P50101 1230 aa11.82□□□□□ -0.52
MSF1YPR047W MSC2Q03455 724 aa11.82□□□□□ -0.52
MSF1YPR047W MOT1P32333 1867 aa11.82□□□□□ -0.52
MSF1YPR047W YMR084WA2P2R3 262 aa11.81□□□□□ -0.52
MSF1YPR047W IRE1P32361 1115 aa11.81□□□□□ -0.52
MSF1YPR047W PAN5P38787 379 aa11.81□□□□□ -0.52
MSF1YPR047W SGM1P47166 707 aa11.81□□□□□ -0.52
MSF1YPR047W ASE1P50275 885 aa11.81□□□□□ -0.52
MSF1YPR047W YLL058WQ12198 575 aa11.81□□□□□ -0.52
MSF1YPR047W ATG11Q12527 1178 aa11.81□□□□□ -0.52
MSF1YPR047W UBR2Q07963 1872 aa11.81□□□□□ -0.52
MSF1YPR047W AZR1P50080 613 aa11.8□□□□□ -0.52
MSF1YPR047W HXT17P53631 564 aa11.8□□□□□ -0.52
MSF1YPR047W CIT1P00890 479 aa11.79□□□□□ -0.52
MSF1YPR047W SES1P07284 462 aaKnown RBP11.79□□□□□ -0.52
MSF1YPR047W JHD1P40034 492 aa11.79□□□□□ -0.52
MSF1YPR047W YNL115CP53925 644 aa11.79□□□□□ -0.52
MSF1YPR047W GCR2Q01722 534 aa11.79□□□□□ -0.52
MSF1YPR047W YDR034W-BQ6Q5X2 51 aa11.79□□□□□ -0.52
MSF1YPR047W SIS2P36024 562 aa11.78□□□□□ -0.52
MSF1YPR047W RSC8P43609 557 aaKnown RBP11.78□□□□□ -0.52
MSF1YPR047W YML020WQ03722 664 aa11.78□□□□□ -0.52
MSF1YPR047W YDR341CQ05506 607 aaKnown RBP11.78□□□□□ -0.52
MSF1YPR047W OXR1Q08952 273 aa11.78□□□□□ -0.52
MSF1YPR047W SUL1P38359 859 aa11.77□□□□□ -0.52
MSF1YPR047W BRL1P38770 471 aa11.77□□□□□ -0.52
MSF1YPR047W HUL5P53119 910 aa11.77□□□□□ -0.52
MSF1YPR047W AFT1P22149 690 aa11.77□□□□□ -0.53
MSF1YPR047W HXT13P39924 564 aa11.77□□□□□ -0.53
MSF1YPR047W ALD5P40047 520 aaKnown RBP11.77□□□□□ -0.53
MSF1YPR047W MCM6P53091 1017 aaKnown RBP11.77□□□□□ -0.53
MSF1YPR047W ARP6Q12509 438 aa11.77□□□□□ -0.53
MSF1YPR047W CLB5P30283 435 aa11.76□□□□□ -0.53
MSF1YPR047W AKR1P39010 764 aa11.76□□□□□ -0.53
MSF1YPR047W HMF1P40037 129 aaKnown RBP11.76□□□□□ -0.53
MSF1YPR047W STI1P15705 589 aaKnown RBP RIP-Chip data11.75□□□□□ -0.53not detected
MSF1YPR047W CAD1P24813 409 aaKnown RBP11.75□□□□□ -0.53
MSF1YPR047W KIN82P25341 720 aa11.75□□□□□ -0.53
MSF1YPR047W TVP38P36164 337 aa11.75□□□□□ -0.53
MSF1YPR047W POA1P38218 177 aa11.75□□□□□ -0.53
MSF1YPR047W GUA1P38625 525 aaKnown RBP11.75□□□□□ -0.53
MSF1YPR047W CCT3P39077 534 aaKnown RBP11.75□□□□□ -0.53
MSF1YPR047W SPO22P40511 975 aa11.75□□□□□ -0.53
MSF1YPR047W INP51P40559 946 aaKnown RBP11.75□□□□□ -0.53
MSF1YPR047W ECM23Q02710 187 aa11.75□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms