RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	GCV1	P48015	400 aa		5.21	□□□□□ -1.58
CAF20	YOR276W	YLL054C	Q12244	843 aa		5.21	□□□□□ -1.58
CAF20	YOR276W	GCD1	P09032	578 aa	Predicted RBP	5.2	□□□□□ -1.58
CAF20	YOR276W	KAR2	P16474	682 aa	Known RBP	5.2	□□□□□ -1.58
CAF20	YOR276W	GPT2	P36148	743 aa		5.2	□□□□□ -1.58
CAF20	YOR276W	SDH1	Q00711	640 aa		5.2	□□□□□ -1.58
CAF20	YOR276W	ULP1	Q02724	621 aa		5.2	□□□□□ -1.58
CAF20	YOR276W	YPL109C	Q02981	657 aa		5.2	□□□□□ -1.58
CAF20	YOR276W	CDC34	P14682	295 aa		5.19	□□□□□ -1.58
CAF20	YOR276W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
CAF20	YOR276W	GRX1	P25373	110 aa	Known RBP	5.19	□□□□□ -1.58
CAF20	YOR276W	OSW7	P43611	510 aa		5.19	□□□□□ -1.58
CAF20	YOR276W	CIT3	P43635	486 aa		5.19	□□□□□ -1.58
CAF20	YOR276W	DOT1	Q04089	582 aa	Known RBP	5.19	□□□□□ -1.58
CAF20	YOR276W	WHI3	P34761	661 aa	Known RBP	5.18	□□□□□ -1.58
CAF20	YOR276W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
CAF20	YOR276W	PIC2	P40035	300 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	NUT1	P53114	1132 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	ALG12	P53730	551 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	MEC3	Q02574	474 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	RPN4	Q03465	531 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	ADI1	Q03677	179 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	BDF2	Q07442	638 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	YOR131C	Q12486	218 aa		5.18	□□□□□ -1.58
CAF20	YOR276W	GCR1	P07261	785 aa		5.17	□□□□□ -1.58
CAF20	YOR276W	DUT1	P33317	147 aa		5.17	□□□□□ -1.58
CAF20	YOR276W	SAP155	P43612	1002 aa		5.17	□□□□□ -1.58
CAF20	YOR276W	TDA5	Q06417	326 aa	Known RBP	5.17	□□□□□ -1.58
CAF20	YOR276W	YOR059C	Q08448	450 aa	Known RBP	5.17	□□□□□ -1.58
CAF20	YOR276W	RAD4	P14736	754 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	YKL069W	P36088	180 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	TAT2	P38967	592 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	BUD6	P41697	788 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	HUL5	P53119	910 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	UTP22	P53254	1237 aa	Predicted RBP	5.16	□□□□□ -1.58
CAF20	YOR276W	MRL1	Q06815	381 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	OPI10	Q08202	246 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	NSI1	Q12457	570 aa		5.16	□□□□□ -1.58
CAF20	YOR276W	SQT1	P35184	431 aa		5.15	□□□□□ -1.59
CAF20	YOR276W	LRG1	P35688	1017 aa		5.15	□□□□□ -1.59
CAF20	YOR276W	RVS167	P39743	482 aa	Known RBP	5.15	□□□□□ -1.59
CAF20	YOR276W	XKS1	P42826	600 aa		5.15	□□□□□ -1.59
CAF20	YOR276W	TIM54	P47045	478 aa		5.15	□□□□□ -1.59
CAF20	YOR276W	RSM26	P47141	266 aa		5.15	□□□□□ -1.59
CAF20	YOR276W	YGR053C	P53234	283 aa		5.15	□□□□□ -1.59
CAF20	YOR276W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
CAF20	YOR276W	FAL1	Q12099	399 aa	Known RBP	5.15	□□□□□ -1.59
CAF20	YOR276W	BAS1	P22035	811 aa		5.14	□□□□□ -1.59
CAF20	YOR276W	SEG2	P34250	1132 aa		5.14	□□□□□ -1.59
CAF20	YOR276W	RRP14	P36080	434 aa	Known RBP	5.14	□□□□□ -1.59
CAF20	YOR276W	SPF1	P39986	1215 aa	Known RBP	5.14	□□□□□ -1.59
CAF20	YOR276W	OYE3	P41816	400 aa	Predicted RBP	5.14	□□□□□ -1.59
CAF20	YOR276W	ECL1	P48235	211 aa		5.14	□□□□□ -1.59
CAF20	YOR276W	ALT1	P52893	592 aa		5.14	□□□□□ -1.59
CAF20	YOR276W	RCM1	P53972	490 aa		5.14	□□□□□ -1.59
CAF20	YOR276W	NAN1	Q02931	896 aa	Known RBP	5.14	□□□□□ -1.59
CAF20	YOR276W	PMT7	Q06644	662 aa		5.14	□□□□□ -1.59
CAF20	YOR276W	RTT10	Q08924	1013 aa		5.14	□□□□□ -1.59
CAF20	YOR276W	POL12	P38121	705 aa	Predicted RBP	5.13	□□□□□ -1.59
CAF20	YOR276W	REI1	P38344	393 aa	Predicted RBP	5.13	□□□□□ -1.59
CAF20	YOR276W	FPR3	P38911	411 aa	Known RBP	5.13	□□□□□ -1.59
CAF20	YOR276W	NIT1	P40447	199 aa		5.13	□□□□□ -1.59
CAF20	YOR276W	MSH4	P40965	878 aa	Predicted RBP	5.13	□□□□□ -1.59
CAF20	YOR276W	DFG16	Q99234	619 aa		5.13	□□□□□ -1.59
CAF20	YOR276W	RPS4A	P0CX35	261 aa	Known RBP	5.12	□□□□□ -1.59
CAF20	YOR276W	RPS4B	P0CX36	261 aa	Known RBP	5.12	□□□□□ -1.59
CAF20	YOR276W	RNQ1	P25367	405 aa		5.12	□□□□□ -1.59
CAF20	YOR276W	PEX13	P80667	386 aa		5.12	□□□□□ -1.59
CAF20	YOR276W	EEB1	Q02891	456 aa		5.12	□□□□□ -1.59
CAF20	YOR276W	ALG6	Q12001	544 aa	Known RBP	5.12	□□□□□ -1.59
CAF20	YOR276W	ARL1	P38116	183 aa	Known RBP	5.11	□□□□□ -1.59
CAF20	YOR276W	PEX28	P38848	579 aa		5.11	□□□□□ -1.59
CAF20	YOR276W	UBP5	P39944	805 aa		5.11	□□□□□ -1.59
CAF20	YOR276W	TYW3	P53177	273 aa		5.11	□□□□□ -1.59
CAF20	YOR276W	MET6	P05694	767 aa	Known RBP	5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-DR6	P0CX70	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-ER1	P0CX71	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-LR2	P0CX72	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-PL	P0CX73	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-JR1	P0CX74	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-LR3	P0CX75	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-ML2	P0CX76	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	RAD27	P26793	382 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TIM23	P32897	222 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	NUP82	P40368	713 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TMA46	Q12000	345 aa	Known RBP	5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-GR1	Q12085	440 aa		5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.1	□□□□□ -1.59
CAF20	YOR276W	TY1A-OL	Q92392	440 aa	Known RBP	5.1	□□□□□ -1.59
CAF20	YOR276W	SMY2	P32909	740 aa	Known RBP	5.09	□□□□□ -1.59
CAF20	YOR276W	HSP78	P33416	811 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	GNP1	P48813	663 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	YGL140C	P53120	1219 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	YGR045C	P53229	120 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	ORC3	P54790	616 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	EAR1	Q03212	550 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	HDA2	Q06629	674 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	PPM2	Q08282	695 aa		5.09	□□□□□ -1.59
CAF20	YOR276W	TSR4	P25040	408 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms