RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C MIC19P43594 170 aa4.48□□□□□ -1.69
VHS3YOR054C YLR326WQ06170 240 aaKnown RBP4.48□□□□□ -1.69
VHS3YOR054C MET7Q08645 548 aa4.48□□□□□ -1.69
VHS3YOR054C APC1P53886 1748 aa4.48□□□□□ -1.69
VHS3YOR054C CDC16P09798 840 aa4.48□□□□□ -1.69
VHS3YOR054C PDR1P12383 1068 aa4.48□□□□□ -1.69
VHS3YOR054C TUP1P16649 713 aa4.48□□□□□ -1.69
VHS3YOR054C RDS1P25611 832 aa4.48□□□□□ -1.69
VHS3YOR054C GSY2P27472 705 aa4.48□□□□□ -1.69
VHS3YOR054C YEL043WP32618 956 aa4.48□□□□□ -1.69
VHS3YOR054C PIH1P38768 344 aa4.48□□□□□ -1.69
VHS3YOR054C NOC2P39744 710 aaKnown RBP4.48□□□□□ -1.69
VHS3YOR054C YIL001WP40560 513 aa4.48□□□□□ -1.69
VHS3YOR054C LYS4P49367 693 aaPredicted RBP4.48□□□□□ -1.69
VHS3YOR054C CTF18P49956 741 aa4.48□□□□□ -1.69
VHS3YOR054C ORM1P53224 222 aa4.48□□□□□ -1.69
VHS3YOR054C FOX2Q02207 900 aaKnown RBP4.48□□□□□ -1.69
VHS3YOR054C CSI1Q04368 295 aa4.48□□□□□ -1.69
VHS3YOR054C PIB1Q06651 286 aa4.48□□□□□ -1.69
VHS3YOR054C GRE2Q12068 342 aaKnown RBP4.48□□□□□ -1.69
VHS3YOR054C ADE6P38972 1358 aaKnown RBP4.47□□□□□ -1.69
VHS3YOR054C PRT1P06103 763 aaKnown RBP4.47□□□□□ -1.69
VHS3YOR054C THR4P16120 514 aaKnown RBP4.47□□□□□ -1.69
VHS3YOR054C IME1P21190 360 aa4.47□□□□□ -1.69
VHS3YOR054C KCC4P25389 1037 aa4.47□□□□□ -1.69
VHS3YOR054C RPL5P26321 297 aaKnown RBP4.47□□□□□ -1.69
VHS3YOR054C GUT1P32190 709 aa4.47□□□□□ -1.69
VHS3YOR054C MET4P32389 672 aa4.47□□□□□ -1.69
VHS3YOR054C STO1P34160 861 aaKnown RBP4.47□□□□□ -1.69
VHS3YOR054C PTH2P34222 208 aa4.47□□□□□ -1.69
VHS3YOR054C RPC37P36121 282 aa4.47□□□□□ -1.69
VHS3YOR054C NUP60P39705 539 aa4.47□□□□□ -1.69
VHS3YOR054C ATG32P40458 529 aa4.47□□□□□ -1.69
VHS3YOR054C ENT3P47160 408 aa4.47□□□□□ -1.69
VHS3YOR054C YNL247WP53852 767 aaKnown RBP4.47□□□□□ -1.69
VHS3YOR054C TFB2Q02939 513 aa4.47□□□□□ -1.69
VHS3YOR054C TAF8Q03750 510 aa4.47□□□□□ -1.69
VHS3YOR054C YLR177WQ06251 628 aa4.47□□□□□ -1.69
VHS3YOR054C NOC3Q07896 663 aaPredicted RBP4.47□□□□□ -1.69
VHS3YOR054C CFT2Q12102 859 aaPredicted RBP4.47□□□□□ -1.69
VHS3YOR054C TCB1Q12466 1186 aa4.47□□□□□ -1.69
VHS3YOR054C CPA2P03965 1118 aaKnown RBP4.46□□□□□ -1.69
VHS3YOR054C VMA1P17255 1071 aaKnown RBP4.46□□□□□ -1.69
VHS3YOR054C SSA4P22202 642 aaKnown RBP4.46□□□□□ -1.69
VHS3YOR054C RAD54P32863 898 aa4.46□□□□□ -1.69
VHS3YOR054C CSE1P33307 960 aa4.46□□□□□ -1.69
VHS3YOR054C LOS1P33418 1100 aaPredicted RBP4.46□□□□□ -1.69
VHS3YOR054C YEL1P34225 687 aa4.46□□□□□ -1.69
VHS3YOR054C SRL3P36167 246 aa4.46□□□□□ -1.69
VHS3YOR054C PTC4P38089 393 aa4.46□□□□□ -1.69
VHS3YOR054C NAB3P38996 802 aaKnown RBP RIP-Chip data4.46□□□□□ -1.69not detected
VHS3YOR054C RPL34BP40525 121 aaKnown RBP4.46□□□□□ -1.69
VHS3YOR054C GCN20P43535 752 aaKnown RBP4.46□□□□□ -1.69
VHS3YOR054C TAF1P46677 1066 aa4.46□□□□□ -1.69
VHS3YOR054C HST2P53686 357 aa4.46□□□□□ -1.69
VHS3YOR054C VPS75P53853 264 aa4.46□□□□□ -1.69
VHS3YOR054C VTC3Q02725 835 aa4.46□□□□□ -1.69
VHS3YOR054C UTP4Q06679 776 aaKnown RBP4.46□□□□□ -1.69
VHS3YOR054C OSH2Q12451 1283 aa4.46□□□□□ -1.69
VHS3YOR054C TYR1P20049 452 aa4.46□□□□□ -1.7
VHS3YOR054C CDC10P25342 322 aaKnown RBP4.46□□□□□ -1.7
VHS3YOR054C RPC19P28000 142 aaKnown RBP4.46□□□□□ -1.7
VHS3YOR054C EFB1P32471 206 aaKnown RBP4.46□□□□□ -1.7
VHS3YOR054C PSY4P38193 441 aa4.46□□□□□ -1.7
VHS3YOR054C LIN1P38852 340 aaPredicted RBP4.46□□□□□ -1.7
VHS3YOR054C PET100P38958 111 aa4.46□□□□□ -1.7
VHS3YOR054C AIM9P40053 627 aaKnown RBP4.46□□□□□ -1.7
VHS3YOR054C DSL1P53847 754 aa4.46□□□□□ -1.7
VHS3YOR054C YPR097WQ06839 1073 aa4.46□□□□□ -1.7
VHS3YOR054C SLX4Q12098 748 aa4.46□□□□□ -1.7
VHS3YOR054C SUI3P09064 285 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C NAT1P12945 854 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C TAL1P15019 335 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C RME1P32338 300 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C SHC1P39000 512 aa4.45□□□□□ -1.7
VHS3YOR054C VID27P40157 782 aa4.45□□□□□ -1.7
VHS3YOR054C INA22P40576 216 aa4.45□□□□□ -1.7
VHS3YOR054C YIR042CP40586 236 aa4.45□□□□□ -1.7
VHS3YOR054C YPT11P48559 417 aa4.45□□□□□ -1.7
VHS3YOR054C MSB3P48566 633 aaPredicted RBP4.45□□□□□ -1.7
VHS3YOR054C SHE10P53075 577 aa4.45□□□□□ -1.7
VHS3YOR054C SFB2P53953 876 aa4.45□□□□□ -1.7
VHS3YOR054C ADA2Q02336 434 aa4.45□□□□□ -1.7
VHS3YOR054C RRP9Q06506 573 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C HIM1Q06674 414 aa4.45□□□□□ -1.7
VHS3YOR054C MPC54Q08550 464 aa4.45□□□□□ -1.7
VHS3YOR054C TMA16Q08687 178 aa4.45□□□□□ -1.7
VHS3YOR054C YOL098CQ12496 1037 aa4.45□□□□□ -1.7
VHS3YOR054C YIL177CP40434 1758 aa4.45□□□□□ -1.7
VHS3YOR054C YJL225CP40889 1758 aa4.45□□□□□ -1.7
VHS3YOR054C PDC1P06169 563 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C RAD53P22216 821 aa4.45□□□□□ -1.7
VHS3YOR054C NFU1P32860 256 aa4.45□□□□□ -1.7
VHS3YOR054C BUD2P33314 1104 aa4.45□□□□□ -1.7
VHS3YOR054C NPL4P33755 580 aa4.45□□□□□ -1.7
VHS3YOR054C GVP36P40531 326 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C YAP5P40574 245 aa4.45□□□□□ -1.7
VHS3YOR054C DAS1P47005 663 aa4.45□□□□□ -1.7
VHS3YOR054C MTR4P47047 1073 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C CCM1P48237 864 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms