RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C FYV8P46949 817 aaKnown RBP5.9□□□□□ -1.46
RAT1YOR048C IRC4Q03036 179 aa5.9□□□□□ -1.46
RAT1YOR048C POM152P39685 1337 aa5.9□□□□□ -1.47
RAT1YOR048C PXL1P36166 706 aa5.9□□□□□ -1.47
RAT1YOR048C OSH3P38713 996 aaKnown RBP5.9□□□□□ -1.47
RAT1YOR048C HUL4P40985 892 aa5.9□□□□□ -1.47
RAT1YOR048C RPN11P43588 306 aaKnown RBP5.9□□□□□ -1.47
RAT1YOR048C DIG1Q03063 452 aaKnown RBP5.9□□□□□ -1.47
RAT1YOR048C GRE2Q12068 342 aaKnown RBP5.9□□□□□ -1.47
RAT1YOR048C NBL1Q3E7Y6 73 aa5.9□□□□□ -1.47
RAT1YOR048C FRD1P32614 470 aaKnown RBP5.89□□□□□ -1.47
RAT1YOR048C ORC6P38826 435 aa5.89□□□□□ -1.47
RAT1YOR048C TIF4632P39936 914 aaKnown RBP5.89□□□□□ -1.47
RAT1YOR048C VID27P40157 782 aa5.89□□□□□ -1.47
RAT1YOR048C CUE3P53137 624 aaKnown RBP5.89□□□□□ -1.47
RAT1YOR048C YMR114CQ04471 368 aaKnown RBP5.89□□□□□ -1.47
RAT1YOR048C YDR278CQ05612 105 aa5.89□□□□□ -1.47
RAT1YOR048C RIX7Q07844 837 aaKnown RBP5.89□□□□□ -1.47
RAT1YOR048C EFM4P40516 257 aa5.89□□□□□ -1.47
RAT1YOR048C ENP2P48234 707 aaKnown RBP5.89□□□□□ -1.47
RAT1YOR048C VAC14Q06708 880 aa5.89□□□□□ -1.47
RAT1YOR048C PRI1P10363 409 aa5.88□□□□□ -1.47
RAT1YOR048C GFA1P14742 717 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C RPO26P20435 155 aa5.88□□□□□ -1.47
RAT1YOR048C CDC60P26637 1090 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C SDA1P53313 767 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C RNT1Q02555 471 aa5.88□□□□□ -1.47
RAT1YOR048C IMH1Q06704 911 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C PPR1P07272 904 aaPredicted RBP5.88□□□□□ -1.47
RAT1YOR048C NUC1P08466 329 aa5.88□□□□□ -1.47
RAT1YOR048C CBP3P21560 335 aa5.88□□□□□ -1.47
RAT1YOR048C MAK31P23059 88 aa5.88□□□□□ -1.47
RAT1YOR048C YKL091CP33324 310 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C CCM1P48237 864 aaPredicted RBP5.88□□□□□ -1.47
RAT1YOR048C UTP14Q04500 899 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C HMI1Q12039 706 aa5.88□□□□□ -1.47
RAT1YOR048C HAT1Q12341 374 aa5.88□□□□□ -1.47
RAT1YOR048C ARG4P04076 463 aaPredicted RBP5.88□□□□□ -1.47
RAT1YOR048C GRX1P25373 110 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C BMH2P34730 273 aaKnown RBP5.88□□□□□ -1.47
RAT1YOR048C YDR338CQ05497 695 aa5.88□□□□□ -1.47
RAT1YOR048C YAP7Q08182 245 aa5.88□□□□□ -1.47
RAT1YOR048C YOR296WQ08748 1289 aa5.88□□□□□ -1.47
RAT1YOR048C MPH3P0CE00 602 aa5.87□□□□□ -1.47
RAT1YOR048C TUP1P16649 713 aa5.87□□□□□ -1.47
RAT1YOR048C GPI10P30777 616 aa5.87□□□□□ -1.47
RAT1YOR048C MYO3P36006 1272 aa5.87□□□□□ -1.47
RAT1YOR048C YGR273CP53329 174 aa5.87□□□□□ -1.47
RAT1YOR048C YDR341CQ05506 607 aaKnown RBP5.87□□□□□ -1.47
RAT1YOR048C SUE1Q06524 206 aa5.87□□□□□ -1.47
RAT1YOR048C OMS1Q06668 471 aa5.87□□□□□ -1.47
RAT1YOR048C RIM15P43565 1770 aa5.87□□□□□ -1.47
RAT1YOR048C BOI1P38041 980 aaKnown RBP5.87□□□□□ -1.47
RAT1YOR048C YBP1P38315 674 aa5.87□□□□□ -1.47
RAT1YOR048C ULP2P40537 1034 aaPredicted RBP5.87□□□□□ -1.47
RAT1YOR048C YJR079WP47126 109 aa5.87□□□□□ -1.47
RAT1YOR048C NGL3Q03210 505 aa5.87□□□□□ -1.47
RAT1YOR048C URH1Q04179 340 aa5.87□□□□□ -1.47
RAT1YOR048C RUD3Q12234 484 aaKnown RBP5.87□□□□□ -1.47
RAT1YOR048C YOL087CQ99247 1116 aa5.87□□□□□ -1.47
RAT1YOR048C LCB1P25045 558 aaKnown RBP5.86□□□□□ -1.47
RAT1YOR048C MAL31P38156 614 aa5.86□□□□□ -1.47
RAT1YOR048C ICP55P40051 511 aa5.86□□□□□ -1.47
RAT1YOR048C VFA1P40080 203 aa5.86□□□□□ -1.47
RAT1YOR048C CIT3P43635 486 aa5.86□□□□□ -1.47
RAT1YOR048C UBA2P52488 636 aa5.86□□□□□ -1.47
RAT1YOR048C OXR1Q08952 273 aa5.86□□□□□ -1.47
RAT1YOR048C PRE10P21242 288 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
RAT1YOR048C DPB3P27344 201 aa5.86□□□□□ -1.47
RAT1YOR048C SET5P38890 526 aaKnown RBP5.86□□□□□ -1.47
RAT1YOR048C AIM33Q04516 312 aa5.86□□□□□ -1.47
RAT1YOR048C SIL1Q08199 421 aa5.86□□□□□ -1.47
RAT1YOR048C DIP2Q12220 943 aaPredicted RBP5.86□□□□□ -1.47
RAT1YOR048C FAS2P19097 1887 aaKnown RBP5.86□□□□□ -1.47
RAT1YOR048C CIT1P00890 479 aa5.85□□□□□ -1.47
RAT1YOR048C PEX2P32800 271 aa5.85□□□□□ -1.47
RAT1YOR048C NDT80P38830 627 aa5.85□□□□□ -1.47
RAT1YOR048C YAP5P40574 245 aa5.85□□□□□ -1.47
RAT1YOR048C SET4P42948 560 aa5.85□□□□□ -1.47
RAT1YOR048C STE11P23561 717 aa5.85□□□□□ -1.47
RAT1YOR048C MCX1P38323 520 aaPredicted RBP5.85□□□□□ -1.47
RAT1YOR048C RIB2Q12362 591 aaKnown RBP5.85□□□□□ -1.47
RAT1YOR048C SPO11P23179 398 aa5.85□□□□□ -1.47
RAT1YOR048C YKL023WP36103 277 aaKnown RBP5.85□□□□□ -1.47
RAT1YOR048C STT3P39007 718 aaKnown RBP5.85□□□□□ -1.47
RAT1YOR048C YFL034WP43564 1073 aa5.85□□□□□ -1.47
RAT1YOR048C YJR142WP47173 342 aa5.85□□□□□ -1.47
RAT1YOR048C LYS4P49367 693 aaPredicted RBP5.85□□□□□ -1.47
RAT1YOR048C ENV11P53246 860 aa5.85□□□□□ -1.47
RAT1YOR048C ALF1P53904 254 aa5.85□□□□□ -1.47
RAT1YOR048C OSH2Q12451 1283 aa5.85□□□□□ -1.47
RAT1YOR048C SAC3P46674 1301 aa5.84□□□□□ -1.47
RAT1YOR048C SPT2P06843 333 aaPredicted RBP5.84□□□□□ -1.47
RAT1YOR048C ARG1P22768 420 aa5.84□□□□□ -1.47
RAT1YOR048C RAM2P29703 316 aa5.84□□□□□ -1.47
RAT1YOR048C PPS1P38148 807 aa5.84□□□□□ -1.47
RAT1YOR048C MMM1P41800 426 aa5.84□□□□□ -1.47
RAT1YOR048C TOS3P43637 560 aa5.84□□□□□ -1.47
RAT1YOR048C ASE1P50275 885 aa5.84□□□□□ -1.47
RAT1YOR048C CSR1Q06705 408 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms