RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C RTT10Q08924 1013 aa4.46□□□□□ -1.7
SHE4YOR035C LAP2Q10740 671 aa4.46□□□□□ -1.7
SHE4YOR035C CWC24P53769 259 aa4.45□□□□□ -1.7
SHE4YOR035C SIW14P53965 281 aa4.45□□□□□ -1.7
SHE4YOR035C ROD1Q02805 837 aa4.45□□□□□ -1.7
SHE4YOR035C MTC5Q03897 1148 aa4.45□□□□□ -1.7
SHE4YOR035C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SHE4YOR035C NFS1P25374 497 aa4.44□□□□□ -1.7
SHE4YOR035C SAF1P38352 637 aa4.44□□□□□ -1.7
SHE4YOR035C MSH4P40965 878 aaPredicted RBP4.44□□□□□ -1.7
SHE4YOR035C RKM2Q03942 479 aa4.44□□□□□ -1.7
SHE4YOR035C GNP1P48813 663 aa4.43□□□□□ -1.7
SHE4YOR035C CDC34P14682 295 aa4.43□□□□□ -1.7
SHE4YOR035C SMY2P32909 740 aaKnown RBP4.43□□□□□ -1.7
SHE4YOR035C VPS16Q03308 798 aa4.43□□□□□ -1.7
SHE4YOR035C PGM1P33401 570 aaKnown RBP4.42□□□□□ -1.7
SHE4YOR035C WHI3P34761 661 aaKnown RBP4.42□□□□□ -1.7
SHE4YOR035C NNK1P36003 928 aa4.42□□□□□ -1.7
SHE4YOR035C YLR257WQ06146 321 aaKnown RBP4.42□□□□□ -1.7
SHE4YOR035C TMA46Q12000 345 aaKnown RBP4.42□□□□□ -1.7
SHE4YOR035C PIN2Q12057 282 aa4.42□□□□□ -1.7
SHE4YOR035C RPS4AP0CX35 261 aaKnown RBP4.42□□□□□ -1.7
SHE4YOR035C RPS4BP0CX36 261 aaKnown RBP4.42□□□□□ -1.7
SHE4YOR035C ENT3P47160 408 aa4.42□□□□□ -1.7
SHE4YOR035C RAT1Q02792 1006 aaKnown RBP4.42□□□□□ -1.7
SHE4YOR035C RET1P22276 1149 aaKnown RBP4.41□□□□□ -1.7
SHE4YOR035C DUT1P33317 147 aa4.41□□□□□ -1.7
SHE4YOR035C KAE1P36132 386 aa4.41□□□□□ -1.7
SHE4YOR035C HXT13P39924 564 aa4.41□□□□□ -1.7
SHE4YOR035C HXT17P53631 564 aa4.41□□□□□ -1.7
SHE4YOR035C ALD6P54115 500 aaKnown RBP4.41□□□□□ -1.7
SHE4YOR035C HXT15P54854 567 aa4.41□□□□□ -1.7
SHE4YOR035C RSA3Q05942 220 aaKnown RBP4.41□□□□□ -1.7
SHE4YOR035C YLR122CQ12312 125 aa4.41□□□□□ -1.7
SHE4YOR035C PTC5Q12511 572 aa4.41□□□□□ -1.7
SHE4YOR035C CHS2P14180 963 aa4.41□□□□□ -1.7
SHE4YOR035C MKK2P32491 506 aa4.41□□□□□ -1.7
SHE4YOR035C AFG2P32794 780 aa4.41□□□□□ -1.7
SHE4YOR035C MMM1P41800 426 aa4.41□□□□□ -1.7
SHE4YOR035C VPS53P47061 822 aa4.41□□□□□ -1.7
SHE4YOR035C GDE1Q02979 1223 aa4.41□□□□□ -1.7
SHE4YOR035C TPP1Q03796 238 aa4.41□□□□□ -1.7
SHE4YOR035C ALG3P38179 458 aa4.4□□□□□ -1.7
SHE4YOR035C NMD3P38861 518 aaKnown RBP4.4□□□□□ -1.7
SHE4YOR035C VAC8P39968 578 aa4.4□□□□□ -1.7
SHE4YOR035C FAA4P47912 694 aaKnown RBP4.4□□□□□ -1.7
SHE4YOR035C ALT1P52893 592 aa4.4□□□□□ -1.7
SHE4YOR035C HRK1Q08732 759 aaKnown RBP4.4□□□□□ -1.7
SHE4YOR035C SYP1P25623 870 aaKnown RBP4.4□□□□□ -1.71
SHE4YOR035C RER2P35196 286 aa4.4□□□□□ -1.71
SHE4YOR035C QNS1P38795 714 aaKnown RBP4.4□□□□□ -1.71
SHE4YOR035C MSB1P21339 1137 aaKnown RBP4.39□□□□□ -1.71
SHE4YOR035C CIT3P43635 486 aa4.39□□□□□ -1.71
SHE4YOR035C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SHE4YOR035C MAG2Q06436 670 aaKnown RBP4.39□□□□□ -1.71
SHE4YOR035C LYP1P32487 611 aa4.39□□□□□ -1.71
SHE4YOR035C YGR130CP53278 816 aa4.39□□□□□ -1.71
SHE4YOR035C EEB1Q02891 456 aa4.39□□□□□ -1.71
SHE4YOR035C EAR1Q03212 550 aa4.39□□□□□ -1.71
SHE4YOR035C PUS7Q08647 676 aaKnown RBP4.39□□□□□ -1.71
SHE4YOR035C NSI1Q12457 570 aa4.39□□□□□ -1.71
SHE4YOR035C MCM7P38132 845 aa4.38□□□□□ -1.71
SHE4YOR035C CNN1P43618 361 aa4.38□□□□□ -1.71
SHE4YOR035C TRP2P00899 507 aaKnown RBP4.38□□□□□ -1.71
SHE4YOR035C SBP1P10080 294 aaKnown RBP4.38□□□□□ -1.71
SHE4YOR035C DBP5P20449 482 aaKnown RBP4.38□□□□□ -1.71
SHE4YOR035C YJL045WP47052 634 aa4.38□□□□□ -1.71
SHE4YOR035C RCM1P53972 490 aa4.38□□□□□ -1.71
SHE4YOR035C SPO20Q04359 397 aa4.38□□□□□ -1.71
SHE4YOR035C FAL1Q12099 399 aaKnown RBP4.38□□□□□ -1.71
SHE4YOR035C BAS1P22035 811 aa4.37□□□□□ -1.71
SHE4YOR035C KIP1P28742 1111 aa4.37□□□□□ -1.71
SHE4YOR035C MOT2P34909 587 aaKnown RBP4.37□□□□□ -1.71
SHE4YOR035C GPB2P39717 880 aa4.37□□□□□ -1.71
SHE4YOR035C AOS1Q06624 347 aa4.37□□□□□ -1.71
SHE4YOR035C YOR059CQ08448 450 aaKnown RBP4.37□□□□□ -1.71
SHE4YOR035C PRI2P20457 528 aa4.36□□□□□ -1.71
SHE4YOR035C MLS1P30952 554 aa4.36□□□□□ -1.71
SHE4YOR035C TYW3P53177 273 aa4.36□□□□□ -1.71
SHE4YOR035C TIF35Q04067 274 aaKnown RBP4.36□□□□□ -1.71
SHE4YOR035C RGA2Q06407 1009 aa4.36□□□□□ -1.71
SHE4YOR035C SPO21Q12411 609 aa4.36□□□□□ -1.71
SHE4YOR035C INO1P11986 533 aa4.36□□□□□ -1.71
SHE4YOR035C RGD1P38339 666 aa4.36□□□□□ -1.71
SHE4YOR035C HNT2P49775 206 aa4.36□□□□□ -1.71
SHE4YOR035C YGR053CP53234 283 aa4.36□□□□□ -1.71
SHE4YOR035C YVC1Q12324 675 aa4.36□□□□□ -1.71
SHE4YOR035C CYC7P00045 113 aa4.35□□□□□ -1.71
SHE4YOR035C TRP3P00937 484 aa4.35□□□□□ -1.71
SHE4YOR035C MED7Q08278 222 aa4.35□□□□□ -1.71
SHE4YOR035C YPL260WQ08977 551 aa4.35□□□□□ -1.71
SHE4YOR035C PUF4P25339 888 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SHE4YOR035C TOS1P38288 455 aa4.34□□□□□ -1.71
SHE4YOR035C YHL012WP38709 493 aa4.34□□□□□ -1.71
SHE4YOR035C KRI1P42846 591 aaKnown RBP4.34□□□□□ -1.71
SHE4YOR035C ALO1P54783 526 aaKnown RBP4.34□□□□□ -1.71
SHE4YOR035C YLR225CQ05948 407 aaKnown RBP4.34□□□□□ -1.71
SHE4YOR035C OPI10Q08202 246 aa4.34□□□□□ -1.71
SHE4YOR035C YKR073CP36153 106 aa4.34□□□□□ -1.72
SHE4YOR035C WRS1Q12109 432 aaKnown RBP4.34□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms