RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeast

Gene SFM1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFM1	YOR021C	HEM3	P28789	327 aa		4.65	□□□□□ -1.67
SFM1	YOR021C	SAM35	P14693	329 aa		4.64	□□□□□ -1.67
SFM1	YOR021C	SEC20	P28791	383 aa		4.64	□□□□□ -1.67
SFM1	YOR021C	YKL077W	P36081	392 aa		4.64	□□□□□ -1.67
SFM1	YOR021C	RVS167	P39743	482 aa	Known RBP	4.64	□□□□□ -1.67
SFM1	YOR021C	RIM8	P53179	542 aa		4.64	□□□□□ -1.67
SFM1	YOR021C	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
SFM1	YOR021C	HDA2	Q06629	674 aa		4.64	□□□□□ -1.67
SFM1	YOR021C	RET1	P22276	1149 aa	Known RBP	4.63	□□□□□ -1.67
SFM1	YOR021C	MET4	P32389	672 aa		4.63	□□□□□ -1.67
SFM1	YOR021C	TOD6	P34219	525 aa		4.63	□□□□□ -1.67
SFM1	YOR021C	PPX1	P38698	397 aa		4.63	□□□□□ -1.67
SFM1	YOR021C	YAR028W	P39548	234 aa		4.63	□□□□□ -1.67
SFM1	YOR021C	YPL277C	Q08989	487 aa		4.63	□□□□□ -1.67
SFM1	YOR021C	YHL012W	P38709	493 aa		4.62	□□□□□ -1.67
SFM1	YOR021C	RRP15	Q06511	250 aa	Predicted RBP	4.62	□□□□□ -1.67
SFM1	YOR021C	NOC3	Q07896	663 aa	Predicted RBP	4.62	□□□□□ -1.67
SFM1	YOR021C	UGA4	P32837	571 aa		4.61	□□□□□ -1.67
SFM1	YOR021C	POL32	P47110	350 aa		4.61	□□□□□ -1.67
SFM1	YOR021C	UTP5	Q04177	643 aa	Known RBP	4.61	□□□□□ -1.67
SFM1	YOR021C	SOD2	P00447	233 aa		4.6	□□□□□ -1.67
SFM1	YOR021C	RPS13	P05756	151 aa	Known RBP	4.6	□□□□□ -1.67
SFM1	YOR021C	YNR063W	P53749	607 aa		4.6	□□□□□ -1.67
SFM1	YOR021C	RSA3	Q05942	220 aa	Known RBP	4.6	□□□□□ -1.67
SFM1	YOR021C	MSH3	P25336	1018 aa		4.59	□□□□□ -1.67
SFM1	YOR021C	AIM26	P32858	118 aa		4.59	□□□□□ -1.67
SFM1	YOR021C	XKS1	P42826	600 aa		4.59	□□□□□ -1.67
SFM1	YOR021C	YJL045W	P47052	634 aa		4.59	□□□□□ -1.67
SFM1	YOR021C	NOG1	Q02892	647 aa	Known RBP	4.59	□□□□□ -1.67
SFM1	YOR021C	PHO4	P07270	312 aa	Known RBP	4.58	□□□□□ -1.68
SFM1	YOR021C	MTR4	P47047	1073 aa	Known RBP	4.58	□□□□□ -1.68
SFM1	YOR021C	PEX13	P80667	386 aa		4.58	□□□□□ -1.68
SFM1	YOR021C	YCS4	Q06156	1176 aa		4.58	□□□□□ -1.68
SFM1	YOR021C	SEC8	P32855	1065 aa		4.57	□□□□□ -1.68
SFM1	YOR021C	MDL2	P33311	773 aa		4.57	□□□□□ -1.68
SFM1	YOR021C	SHU2	P38957	223 aa		4.57	□□□□□ -1.68
SFM1	YOR021C	TOS4	Q06266	489 aa		4.57	□□□□□ -1.68
SFM1	YOR021C	SNO2	P53823	222 aa		4.56	□□□□□ -1.68
SFM1	YOR021C	CLU1	Q03690	1277 aa	Known RBP	4.56	□□□□□ -1.68
SFM1	YOR021C	MCM2	P29469	868 aa		4.55	□□□□□ -1.68
SFM1	YOR021C	RPT1	P33299	467 aa	Known RBP	4.55	□□□□□ -1.68
SFM1	YOR021C	FYV10	P40492	516 aa		4.55	□□□□□ -1.68
SFM1	YOR021C	DAK2	P43550	591 aa		4.55	□□□□□ -1.68
SFM1	YOR021C	SAM37	P50110	327 aa		4.55	□□□□□ -1.68
SFM1	YOR021C	FOL2	P51601	243 aa	Known RBP	4.55	□□□□□ -1.68
SFM1	YOR021C	OYE2	Q03558	400 aa	Known RBP	4.55	□□□□□ -1.68
SFM1	YOR021C	RCL1	Q08096	367 aa	Predicted RBP	4.55	□□□□□ -1.68
SFM1	YOR021C	CTS1	P29029	562 aa		4.54	□□□□□ -1.68
SFM1	YOR021C	SHM2	P37291	469 aa	Known RBP	4.54	□□□□□ -1.68
SFM1	YOR021C	HRK1	Q08732	759 aa	Known RBP	4.54	□□□□□ -1.68
SFM1	YOR021C	HEM13	P11353	328 aa	Known RBP	4.53	□□□□□ -1.68
SFM1	YOR021C	PRP40	P33203	583 aa	Known RBP	4.53	□□□□□ -1.68
SFM1	YOR021C	PAM1	P37304	830 aa	Known RBP	4.53	□□□□□ -1.68
SFM1	YOR021C	QNS1	P38795	714 aa	Known RBP	4.53	□□□□□ -1.68
SFM1	YOR021C	RSM26	P47141	266 aa		4.53	□□□□□ -1.68
SFM1	YOR021C	SNU71	P53207	620 aa	Known RBP	4.53	□□□□□ -1.68
SFM1	YOR021C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SFM1	YOR021C	SPR28	Q04921	423 aa		4.53	□□□□□ -1.68
SFM1	YOR021C	RSC58	Q07979	502 aa		4.53	□□□□□ -1.68
SFM1	YOR021C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
SFM1	YOR021C	SRO9	P25567	434 aa	Known RBP	4.52	□□□□□ -1.69
SFM1	YOR021C	ASF1	P32447	279 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	YSC84	P32793	468 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	ABZ1	P37254	787 aa	Predicted RBP	4.52	□□□□□ -1.69
SFM1	YOR021C	HSE1	P38753	452 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	CIC1	P38779	376 aa	Known RBP	4.52	□□□□□ -1.69
SFM1	YOR021C	YJR107W	P47145	328 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	ULP1	Q02724	621 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	YDR132C	Q03900	495 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	DAL4	Q04895	635 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	LAP2	Q10740	671 aa		4.52	□□□□□ -1.69
SFM1	YOR021C	RDH54	P38086	958 aa		4.51	□□□□□ -1.69
SFM1	YOR021C	MGE1	P38523	228 aa		4.51	□□□□□ -1.69
SFM1	YOR021C	PEX28	P38848	579 aa		4.51	□□□□□ -1.69
SFM1	YOR021C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
SFM1	YOR021C	SPS1	P08458	490 aa		4.5	□□□□□ -1.69
SFM1	YOR021C	VMA4	P22203	233 aa	Known RBP	4.5	□□□□□ -1.69
SFM1	YOR021C	FAA3	P39002	694 aa		4.5	□□□□□ -1.69
SFM1	YOR021C	GPB2	P39717	880 aa		4.5	□□□□□ -1.69
SFM1	YOR021C	SPT20	P50875	604 aa		4.5	□□□□□ -1.69
SFM1	YOR021C	GIS1	Q03833	894 aa		4.5	□□□□□ -1.69
SFM1	YOR021C	YLR358C	O13565	187 aa		4.49	□□□□□ -1.69
SFM1	YOR021C	GCD6	P32501	712 aa	Known RBP	4.49	□□□□□ -1.69
SFM1	YOR021C	AFG2	P32794	780 aa		4.49	□□□□□ -1.69
SFM1	YOR021C	ATG14	P38270	344 aa		4.49	□□□□□ -1.69
SFM1	YOR021C	RPS26A	P39938	119 aa	Known RBP	4.49	□□□□□ -1.69
SFM1	YOR021C	RPS26B	P39939	119 aa	Known RBP	4.49	□□□□□ -1.69
SFM1	YOR021C	SPO21	Q12411	609 aa		4.49	□□□□□ -1.69
SFM1	YOR021C	VPS35	P34110	944 aa		4.48	□□□□□ -1.69
SFM1	YOR021C	SQT1	P35184	431 aa		4.48	□□□□□ -1.69
SFM1	YOR021C	LAM1	P38851	1228 aa		4.48	□□□□□ -1.69
SFM1	YOR021C	GSF2	Q04697	403 aa	Known RBP	4.48	□□□□□ -1.69
SFM1	YOR021C	TUB2	P02557	457 aa	Known RBP	4.47	□□□□□ -1.69
SFM1	YOR021C	KIP1	P28742	1111 aa		4.47	□□□□□ -1.69
SFM1	YOR021C	ADD66	P36040	267 aa		4.47	□□□□□ -1.69
SFM1	YOR021C	MEF2	P39677	819 aa		4.47	□□□□□ -1.69
SFM1	YOR021C	YGL140C	P53120	1219 aa		4.47	□□□□□ -1.69
SFM1	YOR021C	GCN5	Q03330	439 aa		4.47	□□□□□ -1.69
SFM1	YOR021C	ROT1	Q03691	256 aa		4.47	□□□□□ -1.69
SFM1	YOR021C	SGD1	Q06132	899 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms