RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	TAF13	P11747	167 aa		4.91	□□□□□ -1.62
MSN1	YOL116W	SMY2	P32909	740 aa	Known RBP	4.91	□□□□□ -1.62
MSN1	YOL116W	NEM1	P38757	446 aa		4.91	□□□□□ -1.62
MSN1	YOL116W	FAA3	P39002	694 aa		4.91	□□□□□ -1.62
MSN1	YOL116W	YAR028W	P39548	234 aa		4.91	□□□□□ -1.62
MSN1	YOL116W	UTP5	Q04177	643 aa	Known RBP	4.91	□□□□□ -1.62
MSN1	YOL116W	REV3	P14284	1504 aa		4.91	□□□□□ -1.62
MSN1	YOL116W	BPT1	P14772	1559 aa		4.91	□□□□□ -1.62
MSN1	YOL116W	GLT1	Q12680	2145 aa	Known RBP	4.9	□□□□□ -1.62
MSN1	YOL116W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
MSN1	YOL116W	NFS1	P25374	497 aa		4.9	□□□□□ -1.63
MSN1	YOL116W	TOS1	P38288	455 aa		4.9	□□□□□ -1.63
MSN1	YOL116W	RPS26A	P39938	119 aa	Known RBP	4.9	□□□□□ -1.63
MSN1	YOL116W	RPS26B	P39939	119 aa	Known RBP	4.9	□□□□□ -1.63
MSN1	YOL116W	YJR107W	P47145	328 aa		4.9	□□□□□ -1.63
MSN1	YOL116W	ALT1	P52893	592 aa		4.9	□□□□□ -1.63
MSN1	YOL116W	YGL140C	P53120	1219 aa		4.9	□□□□□ -1.63
MSN1	YOL116W	RCM1	P53972	490 aa		4.9	□□□□□ -1.63
MSN1	YOL116W	TOS4	Q06266	489 aa		4.9	□□□□□ -1.63
MSN1	YOL116W	RAD2	P07276	1031 aa		4.89	□□□□□ -1.63
MSN1	YOL116W	ATE1	P16639	503 aa		4.89	□□□□□ -1.63
MSN1	YOL116W	WHI3	P34761	661 aa	Known RBP	4.89	□□□□□ -1.63
MSN1	YOL116W	ADD66	P36040	267 aa		4.89	□□□□□ -1.63
MSN1	YOL116W	XKS1	P42826	600 aa		4.89	□□□□□ -1.63
MSN1	YOL116W	INP52	P50942	1183 aa		4.89	□□□□□ -1.63
MSN1	YOL116W	RKM2	Q03942	479 aa		4.89	□□□□□ -1.63
MSN1	YOL116W	PEP1	P32319	1579 aa		4.89	□□□□□ -1.63
MSN1	YOL116W	CYC8	P14922	966 aa		4.88	□□□□□ -1.63
MSN1	YOL116W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
MSN1	YOL116W	LIP5	P32875	414 aa		4.88	□□□□□ -1.63
MSN1	YOL116W	YKR073C	P36153	106 aa		4.88	□□□□□ -1.63
MSN1	YOL116W	RDH54	P38086	958 aa		4.88	□□□□□ -1.63
MSN1	YOL116W	RRP15	Q06511	250 aa	Predicted RBP	4.88	□□□□□ -1.63
MSN1	YOL116W	SEC23	P15303	768 aa	Known RBP	4.87	□□□□□ -1.63
MSN1	YOL116W	RET1	P22276	1149 aa	Known RBP	4.87	□□□□□ -1.63
MSN1	YOL116W	PEP7	P32609	515 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	SEC8	P32855	1065 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	VPS53	P47061	822 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	YNR063W	P53749	607 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	RMD1	Q03441	430 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	EST2	Q06163	884 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	ESF1	Q06344	628 aa	Known RBP	4.87	□□□□□ -1.63
MSN1	YOL116W	BRE4	Q07660	1125 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	ATG2	P53855	1592 aa		4.87	□□□□□ -1.63
MSN1	YOL116W	MCM2	P29469	868 aa		4.86	□□□□□ -1.63
MSN1	YOL116W	PIC2	P40035	300 aa		4.86	□□□□□ -1.63
MSN1	YOL116W	YLR257W	Q06146	321 aa	Known RBP	4.86	□□□□□ -1.63
MSN1	YOL116W	HRK1	Q08732	759 aa	Known RBP	4.86	□□□□□ -1.63
MSN1	YOL116W	ENT3	P47160	408 aa		4.85	□□□□□ -1.63
MSN1	YOL116W	OYE2	Q03558	400 aa	Known RBP	4.85	□□□□□ -1.63
MSN1	YOL116W	TPP1	Q03796	238 aa		4.85	□□□□□ -1.63
MSN1	YOL116W	PUS7	Q08647	676 aa	Known RBP	4.85	□□□□□ -1.63
MSN1	YOL116W	TRE1	Q08919	783 aa		4.85	□□□□□ -1.63
MSN1	YOL116W	YVC1	Q12324	675 aa		4.85	□□□□□ -1.63
MSN1	YOL116W	QNS1	P38795	714 aa	Known RBP	4.84	□□□□□ -1.63
MSN1	YOL116W	SPR28	Q04921	423 aa		4.84	□□□□□ -1.63
MSN1	YOL116W	RSA3	Q05942	220 aa	Known RBP	4.84	□□□□□ -1.63
MSN1	YOL116W	MAG2	Q06436	670 aa	Known RBP	4.84	□□□□□ -1.63
MSN1	YOL116W	SSN2	P38931	1420 aa		4.83	□□□□□ -1.64
MSN1	YOL116W	NAP1	P25293	417 aa	Known RBP	4.83	□□□□□ -1.64
MSN1	YOL116W	ADP1	P25371	1049 aa		4.83	□□□□□ -1.64
MSN1	YOL116W	RAD27	P26793	382 aa		4.83	□□□□□ -1.64
MSN1	YOL116W	OYE3	P41816	400 aa	Predicted RBP	4.83	□□□□□ -1.64
MSN1	YOL116W	DED1	P06634	604 aa	Known RBP	4.82	□□□□□ -1.64
MSN1	YOL116W	GCD1	P09032	578 aa	Predicted RBP	4.82	□□□□□ -1.64
MSN1	YOL116W	HEM13	P11353	328 aa	Known RBP	4.82	□□□□□ -1.64
MSN1	YOL116W	FYV10	P40492	516 aa		4.82	□□□□□ -1.64
MSN1	YOL116W	CTH1	P47976	325 aa		4.82	□□□□□ -1.64
MSN1	YOL116W	SIW14	P53965	281 aa		4.82	□□□□□ -1.64
MSN1	YOL116W	EAR1	Q03212	550 aa		4.82	□□□□□ -1.64
MSN1	YOL116W	MRL1	Q06815	381 aa		4.82	□□□□□ -1.64
MSN1	YOL116W	PTC5	Q12511	572 aa		4.82	□□□□□ -1.64
MSN1	YOL116W	SDH1	Q00711	640 aa		4.81	□□□□□ -1.64
MSN1	YOL116W	HDA2	Q06629	674 aa		4.81	□□□□□ -1.64
MSN1	YOL116W	TMA46	Q12000	345 aa	Known RBP	4.81	□□□□□ -1.64
MSN1	YOL116W	PRO1	P32264	428 aa		4.8	□□□□□ -1.64
MSN1	YOL116W	MDL2	P33311	773 aa		4.8	□□□□□ -1.64
MSN1	YOL116W	YHL012W	P38709	493 aa		4.8	□□□□□ -1.64
MSN1	YOL116W	PEX7	P39108	375 aa		4.8	□□□□□ -1.64
MSN1	YOL116W	RTT10	Q08924	1013 aa		4.8	□□□□□ -1.64
MSN1	YOL116W	YCF1	P39109	1515 aa	Known RBP	4.79	□□□□□ -1.64
MSN1	YOL116W	GCR1	P07261	785 aa		4.79	□□□□□ -1.64
MSN1	YOL116W	SRO9	P25567	434 aa	Known RBP	4.79	□□□□□ -1.64
MSN1	YOL116W	ALG3	P38179	458 aa		4.79	□□□□□ -1.64
MSN1	YOL116W	FOL2	P51601	243 aa	Known RBP	4.79	□□□□□ -1.64
MSN1	YOL116W	SSY1	Q03770	852 aa		4.79	□□□□□ -1.64
MSN1	YOL116W	NBA1	Q08229	501 aa	Known RBP	4.79	□□□□□ -1.64
MSN1	YOL116W	YPL260W	Q08977	551 aa		4.79	□□□□□ -1.64
MSN1	YOL116W	UFD4	P33202	1483 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	SYP1	P25623	870 aa	Known RBP	4.78	□□□□□ -1.64
MSN1	YOL116W	KIP1	P28742	1111 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	MKK2	P32491	506 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	YSC84	P32793	468 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	PET112	P33893	541 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	MNR2	P35724	969 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	PTC7	P38797	343 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	NMD3	P38861	518 aa	Known RBP	4.78	□□□□□ -1.64
MSN1	YOL116W	ROD1	Q02805	837 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	SVF1	Q05515	481 aa		4.78	□□□□□ -1.64
MSN1	YOL116W	COQ4	O13525	335 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms