RNA–Protein interactions for RNA: YOL041C

NOP12, Transcript of Nucleolar protein involved in pre-25S rRNA processing, yeast

Gene NOP12, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP12	YOL041C	DED1	P06634	604 aa	Known RBP	5.04	□□□□□ -1.6
NOP12	YOL041C	MSH4	P40965	878 aa	Predicted RBP	5.04	□□□□□ -1.6
NOP12	YOL041C	XKS1	P42826	600 aa		5.04	□□□□□ -1.6
NOP12	YOL041C	MTR4	P47047	1073 aa	Known RBP	5.04	□□□□□ -1.6
NOP12	YOL041C	EAR1	Q03212	550 aa		5.04	□□□□□ -1.6
NOP12	YOL041C	RPS4A	P0CX35	261 aa	Known RBP	5.04	□□□□□ -1.6
NOP12	YOL041C	RPS4B	P0CX36	261 aa	Known RBP	5.04	□□□□□ -1.6
NOP12	YOL041C	PRE9	P23638	258 aa	Known RBP	5.04	□□□□□ -1.6
NOP12	YOL041C	ATG14	P38270	344 aa		5.03	□□□□□ -1.6
NOP12	YOL041C	NFS1	P25374	497 aa		5.02	□□□□□ -1.61
NOP12	YOL041C	YKL222C	P35995	705 aa		5.02	□□□□□ -1.61
NOP12	YOL041C	SEA4	P38164	1038 aa		5.02	□□□□□ -1.61
NOP12	YOL041C	YAR028W	P39548	234 aa		5.02	□□□□□ -1.61
NOP12	YOL041C	MCD1	Q12158	566 aa		5.02	□□□□□ -1.61
NOP12	YOL041C	VMA4	P22203	233 aa	Known RBP	5.01	□□□□□ -1.61
NOP12	YOL041C	ASF1	P32447	279 aa		5.01	□□□□□ -1.61
NOP12	YOL041C	ARL1	P38116	183 aa	Known RBP	5.01	□□□□□ -1.61
NOP12	YOL041C	MMM1	P41800	426 aa		5.01	□□□□□ -1.61
NOP12	YOL041C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
NOP12	YOL041C	GCR1	P07261	785 aa		5	□□□□□ -1.61
NOP12	YOL041C	MSB1	P21339	1137 aa	Known RBP	5	□□□□□ -1.61
NOP12	YOL041C	YCR015C	P25616	317 aa		5	□□□□□ -1.61
NOP12	YOL041C	SEG2	P34250	1132 aa		5	□□□□□ -1.61
NOP12	YOL041C	RDH54	P38086	958 aa		5	□□□□□ -1.61
NOP12	YOL041C	EST2	Q06163	884 aa		5	□□□□□ -1.61
NOP12	YOL041C	HDA2	Q06629	674 aa		5	□□□□□ -1.61
NOP12	YOL041C	MRL1	Q06815	381 aa		5	□□□□□ -1.61
NOP12	YOL041C	GCD1	P09032	578 aa	Predicted RBP	4.99	□□□□□ -1.61
NOP12	YOL041C	RET1	P22276	1149 aa	Known RBP	4.99	□□□□□ -1.61
NOP12	YOL041C	LRG1	P35688	1017 aa		4.99	□□□□□ -1.61
NOP12	YOL041C	ADD66	P36040	267 aa		4.99	□□□□□ -1.61
NOP12	YOL041C	RCM1	P53972	490 aa		4.99	□□□□□ -1.61
NOP12	YOL041C	SDH1	Q00711	640 aa		4.99	□□□□□ -1.61
NOP12	YOL041C	ROD1	Q02805	837 aa		4.99	□□□□□ -1.61
NOP12	YOL041C	SEC23	P15303	768 aa	Known RBP	4.98	□□□□□ -1.61
NOP12	YOL041C	SMY2	P32909	740 aa	Known RBP	4.98	□□□□□ -1.61
NOP12	YOL041C	CIT3	P43635	486 aa		4.98	□□□□□ -1.61
NOP12	YOL041C	TPP1	Q03796	238 aa		4.98	□□□□□ -1.61
NOP12	YOL041C	YLR257W	Q06146	321 aa	Known RBP	4.98	□□□□□ -1.61
NOP12	YOL041C	LAP2	Q10740	671 aa		4.98	□□□□□ -1.61
NOP12	YOL041C	NNK1	P36003	928 aa		4.97	□□□□□ -1.61
NOP12	YOL041C	ALT1	P52893	592 aa		4.97	□□□□□ -1.61
NOP12	YOL041C	ESF1	Q06344	628 aa	Known RBP	4.97	□□□□□ -1.61
NOP12	YOL041C	RAT1	Q02792	1006 aa	Known RBP	4.96	□□□□□ -1.62
NOP12	YOL041C	RSA3	Q05942	220 aa	Known RBP	4.96	□□□□□ -1.62
NOP12	YOL041C	AFG2	P32794	780 aa		4.95	□□□□□ -1.62
NOP12	YOL041C	HSE1	P38753	452 aa		4.95	□□□□□ -1.62
NOP12	YOL041C	PUS7	Q08647	676 aa	Known RBP	4.95	□□□□□ -1.62
NOP12	YOL041C	YVC1	Q12324	675 aa		4.95	□□□□□ -1.62
NOP12	YOL041C	QNS1	P38795	714 aa	Known RBP	4.94	□□□□□ -1.62
NOP12	YOL041C	GPB2	P39717	880 aa		4.94	□□□□□ -1.62
NOP12	YOL041C	PTC5	Q12511	572 aa		4.94	□□□□□ -1.62
NOP12	YOL041C	PET112	P33893	541 aa		4.93	□□□□□ -1.62
NOP12	YOL041C	ALG3	P38179	458 aa		4.93	□□□□□ -1.62
NOP12	YOL041C	OYE3	P41816	400 aa	Predicted RBP	4.93	□□□□□ -1.62
NOP12	YOL041C	YJL045W	P47052	634 aa		4.93	□□□□□ -1.62
NOP12	YOL041C	GIS1	Q03833	894 aa		4.93	□□□□□ -1.62
NOP12	YOL041C	MKK2	P32491	506 aa		4.92	□□□□□ -1.62
NOP12	YOL041C	POL12	P38121	705 aa	Predicted RBP	4.92	□□□□□ -1.62
NOP12	YOL041C	HXT13	P39924	564 aa		4.92	□□□□□ -1.62
NOP12	YOL041C	GNP1	P48813	663 aa		4.92	□□□□□ -1.62
NOP12	YOL041C	HXT17	P53631	564 aa		4.92	□□□□□ -1.62
NOP12	YOL041C	HXT15	P54854	567 aa		4.92	□□□□□ -1.62
NOP12	YOL041C	JIP5	Q06214	492 aa	Predicted RBP	4.92	□□□□□ -1.62
NOP12	YOL041C	NSI1	Q12457	570 aa		4.92	□□□□□ -1.62
NOP12	YOL041C	KIP1	P28742	1111 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	PRO1	P32264	428 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	NIT1	P40447	199 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	GTS1	P40956	396 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	ECL1	P48235	211 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	SIW14	P53965	281 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	SSY1	Q03770	852 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	RKM2	Q03942	479 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	ESC8	Q08119	714 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	YOR059C	Q08448	450 aa	Known RBP	4.91	□□□□□ -1.62
NOP12	YOL041C	TRE1	Q08919	783 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	RAD27	P26793	382 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	PTC7	P38797	343 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	PEX7	P39108	375 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	TAF1	P46677	1066 aa		4.91	□□□□□ -1.62
NOP12	YOL041C	RER2	P35196	286 aa		4.9	□□□□□ -1.63
NOP12	YOL041C	VPS53	P47061	822 aa		4.9	□□□□□ -1.63
NOP12	YOL041C	RMD1	Q03441	430 aa		4.9	□□□□□ -1.63
NOP12	YOL041C	HRK1	Q08732	759 aa	Known RBP	4.9	□□□□□ -1.63
NOP12	YOL041C	RTT10	Q08924	1013 aa		4.9	□□□□□ -1.63
NOP12	YOL041C	TAF13	P11747	167 aa		4.89	□□□□□ -1.63
NOP12	YOL041C	SYP1	P25623	870 aa	Known RBP	4.89	□□□□□ -1.63
NOP12	YOL041C	MLS1	P30952	554 aa		4.89	□□□□□ -1.63
NOP12	YOL041C	DUT1	P33317	147 aa		4.89	□□□□□ -1.63
NOP12	YOL041C	YHL012W	P38709	493 aa		4.89	□□□□□ -1.63
NOP12	YOL041C	GAS1	P22146	559 aa	Known RBP	4.88	□□□□□ -1.63
NOP12	YOL041C	ADP1	P25371	1049 aa		4.88	□□□□□ -1.63
NOP12	YOL041C	MOT2	P34909	587 aa	Known RBP	4.88	□□□□□ -1.63
NOP12	YOL041C	MCM7	P38132	845 aa		4.88	□□□□□ -1.63
NOP12	YOL041C	RCL1	Q08096	367 aa	Predicted RBP	4.88	□□□□□ -1.63
NOP12	YOL041C	SPO21	Q12411	609 aa		4.88	□□□□□ -1.63
NOP12	YOL041C	CDC34	P14682	295 aa		4.87	□□□□□ -1.63
NOP12	YOL041C	YSC84	P32793	468 aa		4.87	□□□□□ -1.63
NOP12	YOL041C	HSP78	P33416	811 aa		4.87	□□□□□ -1.63
NOP12	YOL041C	MAD1	P40957	749 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms