RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W TKL1P23254 680 aaKnown RBP12.4□□□□□ -0.42
PRE6YOL038W YLR326WQ06170 240 aaKnown RBP12.4□□□□□ -0.42
PRE6YOL038W FPR4Q06205 392 aaPredicted RBP12.4□□□□□ -0.42
PRE6YOL038W GUD1Q07729 489 aa12.4□□□□□ -0.42
PRE6YOL038W ISW2Q08773 1120 aa12.4□□□□□ -0.42
PRE6YOL038W WHI3P34761 661 aaKnown RBP12.39□□□□□ -0.43
PRE6YOL038W ECM16Q04217 1267 aaKnown RBP12.39□□□□□ -0.43
PRE6YOL038W YOR111WQ99210 232 aa12.39□□□□□ -0.43
PRE6YOL038W FLR1P38124 548 aa12.38□□□□□ -0.43
PRE6YOL038W REG2P38232 338 aa12.38□□□□□ -0.43
PRE6YOL038W MDM1Q01846 1127 aa12.38□□□□□ -0.43
PRE6YOL038W TRM11Q12463 433 aa12.38□□□□□ -0.43
PRE6YOL038W FKS1P38631 1876 aaKnown RBP12.38□□□□□ -0.43
PRE6YOL038W MCM4P30665 933 aaKnown RBP12.37□□□□□ -0.43
PRE6YOL038W TFC4P33339 1025 aa12.37□□□□□ -0.43
PRE6YOL038W FMS1P50264 508 aa12.37□□□□□ -0.43
PRE6YOL038W FMP30Q02883 468 aa12.37□□□□□ -0.43
PRE6YOL038W YDR524C-BQ3E6R4 66 aa12.37□□□□□ -0.43
PRE6YOL038W HXT13P39924 564 aa12.36□□□□□ -0.43
PRE6YOL038W YFL040WP43562 540 aa12.36□□□□□ -0.43
PRE6YOL038W DAK1P54838 584 aaKnown RBP12.36□□□□□ -0.43
PRE6YOL038W ISA1Q07821 250 aaPredicted RBP12.36□□□□□ -0.43
PRE6YOL038W DSE3Q08729 430 aa12.36□□□□□ -0.43
PRE6YOL038W PEP3P27801 918 aa12.35□□□□□ -0.43
PRE6YOL038W YDR034W-BQ6Q5X2 51 aa12.35□□□□□ -0.43
PRE6YOL038W UGA4P32837 571 aa12.34□□□□□ -0.43
PRE6YOL038W ECM23Q02710 187 aa12.34□□□□□ -0.43
PRE6YOL038W RIF1P29539 1916 aa12.33□□□□□ -0.44
PRE6YOL038W LIF1P53150 421 aa12.33□□□□□ -0.44
PRE6YOL038W PTA1Q01329 785 aaPredicted RBP12.33□□□□□ -0.44
PRE6YOL038W EST2Q06163 884 aa12.33□□□□□ -0.44
PRE6YOL038W CLF1Q12309 687 aaPredicted RBP12.33□□□□□ -0.44
PRE6YOL038W VPS53P47061 822 aa12.32□□□□□ -0.44
PRE6YOL038W ASE1P50275 885 aa12.32□□□□□ -0.44
PRE6YOL038W LSB1P53281 241 aa12.32□□□□□ -0.44
PRE6YOL038W GCR2Q01722 534 aa12.32□□□□□ -0.44
PRE6YOL038W AHC1Q12433 566 aa12.32□□□□□ -0.44
PRE6YOL038W LDB19Q12502 818 aa12.32□□□□□ -0.44
PRE6YOL038W MAS2P11914 482 aa12.31□□□□□ -0.44
PRE6YOL038W RPS7BP48164 190 aaKnown RBP12.31□□□□□ -0.44
PRE6YOL038W EAR1Q03212 550 aa12.31□□□□□ -0.44
PRE6YOL038W RNR3P21672 869 aaKnown RBP12.3□□□□□ -0.44
PRE6YOL038W GRS1P38088 690 aaKnown RBP12.3□□□□□ -0.44
PRE6YOL038W PAN5P38787 379 aa12.3□□□□□ -0.44
PRE6YOL038W VPS72Q03388 795 aa12.3□□□□□ -0.44
PRE6YOL038W RTP1Q12751 981 aa12.3□□□□□ -0.44
PRE6YOL038W AKR1P39010 764 aa12.29□□□□□ -0.44
PRE6YOL038W VIP1Q06685 1146 aaKnown RBP12.29□□□□□ -0.44
PRE6YOL038W WHI4Q07655 649 aaKnown RBP12.29□□□□□ -0.44
PRE6YOL038W POT1P27796 417 aaKnown RBP RIP-Chip data12.28□□□□□ -0.44not detected
PRE6YOL038W SEC8P32855 1065 aa12.28□□□□□ -0.44
PRE6YOL038W AIM9P40053 627 aaKnown RBP12.28□□□□□ -0.44
PRE6YOL038W STI1P15705 589 aaKnown RBP RIP-Chip data12.27□□□□□ -0.45not detected
PRE6YOL038W CAD1P24813 409 aaKnown RBP12.27□□□□□ -0.45
PRE6YOL038W GPT2P36148 743 aa12.27□□□□□ -0.45
PRE6YOL038W YNL115CP53925 644 aa12.27□□□□□ -0.45
PRE6YOL038W ESF1Q06344 628 aaKnown RBP12.27□□□□□ -0.45
PRE6YOL038W OXR1Q08952 273 aa12.27□□□□□ -0.45
PRE6YOL038W HEM1P09950 548 aaPredicted RBP12.26□□□□□ -0.45
PRE6YOL038W RPL8AP17076 256 aaKnown RBP12.26□□□□□ -0.45
PRE6YOL038W TIM23P32897 222 aa12.26□□□□□ -0.45
PRE6YOL038W ALG2P43636 503 aa12.26□□□□□ -0.45
PRE6YOL038W MET6P05694 767 aaKnown RBP12.25□□□□□ -0.45
PRE6YOL038W KIN82P25341 720 aa12.25□□□□□ -0.45
PRE6YOL038W SUL1P38359 859 aa12.25□□□□□ -0.45
PRE6YOL038W VID28P40547 921 aa12.25□□□□□ -0.45
PRE6YOL038W ARP6Q12509 438 aa12.25□□□□□ -0.45
PRE6YOL038W TY1B-AO13527 1196 aaKnown RBP12.24□□□□□ -0.45
PRE6YOL038W CIT1P00890 479 aa12.24□□□□□ -0.45
PRE6YOL038W UBP11P36026 717 aa12.24□□□□□ -0.45
PRE6YOL038W AVT3P36062 692 aa12.24□□□□□ -0.45
PRE6YOL038W TVP23P38962 199 aa12.24□□□□□ -0.45
PRE6YOL038W INP51P40559 946 aaKnown RBP12.24□□□□□ -0.45
PRE6YOL038W SAD1P43589 448 aa12.24□□□□□ -0.45
PRE6YOL038W FOL2P51601 243 aaKnown RBP12.24□□□□□ -0.45
PRE6YOL038W YDR341CQ05506 607 aaKnown RBP12.24□□□□□ -0.45
PRE6YOL038W ATG11Q12527 1178 aa12.24□□□□□ -0.45
PRE6YOL038W DUR3P33413 735 aa12.23□□□□□ -0.45
PRE6YOL038W SGM1P47166 707 aa12.23□□□□□ -0.45
PRE6YOL038W AZR1P50080 613 aa12.23□□□□□ -0.45
PRE6YOL038W UBP15P50101 1230 aa12.23□□□□□ -0.45
PRE6YOL038W MSC2Q03455 724 aa12.23□□□□□ -0.45
PRE6YOL038W EPL1P43572 832 aa12.22□□□□□ -0.45
PRE6YOL038W TRL1P09880 827 aaKnown RBP12.21□□□□□ -0.45
PRE6YOL038W FBP26P32604 452 aa12.21□□□□□ -0.45
PRE6YOL038W TPM2P40414 161 aa12.21□□□□□ -0.45
PRE6YOL038W ORC4P54791 529 aa12.21□□□□□ -0.45
PRE6YOL038W YMR084WA2P2R3 262 aa12.2□□□□□ -0.46
PRE6YOL038W TPM1P17536 199 aaKnown RBP12.2□□□□□ -0.46
PRE6YOL038W SEC20P28791 383 aa12.2□□□□□ -0.46
PRE6YOL038W MSC7P38694 644 aa12.2□□□□□ -0.46
PRE6YOL038W PCI8P40512 444 aa12.2□□□□□ -0.46
PRE6YOL038W SNA3P14359 133 aa12.19□□□□□ -0.46
PRE6YOL038W YGR273CP53329 174 aa12.19□□□□□ -0.46
PRE6YOL038W GIS4Q04233 774 aa12.19□□□□□ -0.46
PRE6YOL038W YLL058WQ12198 575 aa12.19□□□□□ -0.46
PRE6YOL038W ESS1P22696 170 aa12.18□□□□□ -0.46
PRE6YOL038W SWI4P25302 1093 aaKnown RBP12.18□□□□□ -0.46
PRE6YOL038W PWP2P25635 923 aaKnown RBP12.18□□□□□ -0.46
PRE6YOL038W RXT2P38255 430 aa12.18□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms