RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	MOT2	P34909	587 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	YKL133C	P36066	463 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	HXT8	P40886	569 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	EMW1	P42842	904 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	RSC8	P43609	557 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	BFA1	P47113	574 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	DAN4	P47179	1161 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	UTP8	P53276	713 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	HEH2	Q03281	663 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	YPR097W	Q06839	1073 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	YDL124W	Q07551	312 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	TMA46	Q12000	345 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	KRR1	P25586	316 aa	Predicted RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	CDC60	P26637	1090 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	ECM32	P32644	1121 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	SMY2	P32909	740 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	VBA5	P36172	582 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	YHL041W	P38730	149 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	CAJ1	P39101	391 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	TGL3	P40308	642 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	PBP1	P53297	722 aa	Known RBP	3.88	□□□□□ -1.79
TOP1	YOL006C	GRX3	Q03835	250 aa		3.88	□□□□□ -1.79
TOP1	YOL006C	KAR2	P16474	682 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	TPM1	P17536	199 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	VMA8	P32610	256 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	ABD1	P32783	436 aa	Predicted RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	UGA4	P32837	571 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	PBY1	P38254	753 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	RXT2	P38255	430 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	PIC2	P40035	300 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	TAN1	P53072	289 aa	Predicted RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	KRE33	P53914	1056 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	SNP1	Q00916	300 aa	Predicted RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	VTI1	Q04338	217 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	MRL1	Q06815	381 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	TOM70	P07213	617 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	KCC4	P25389	1037 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	SBA1	P28707	216 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	NOP4	P37838	685 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	KTR4	P38131	464 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	SEA4	P38164	1038 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	SEC26	P41810	973 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	ALR2	P43553	858 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	CNN1	P43618	361 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	IML2	P47031	731 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	BTN2	P53286	410 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	YNR063W	P53749	607 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	ADI1	Q03677	179 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	SPN1	Q06505	410 aa	Predicted RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	OPY2	Q06810	360 aa		3.87	□□□□□ -1.79
TOP1	YOL006C	CMR1	Q12510	522 aa	Known RBP	3.87	□□□□□ -1.79
TOP1	YOL006C	HTA1	P04911	132 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	HTA2	P04912	132 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	SWI5	P08153	709 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	MRPL33	P20084	86 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	MKK2	P32491	506 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	PXA2	P34230	853 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	DEF1	P35732	738 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	DSS1	P39112	969 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	GPP2	P40106	250 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	MGS1	P40151	587 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	ATP22	P50273	684 aa	Predicted RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	ULP1	Q02724	621 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	MTQ2	Q03920	221 aa	Predicted RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	RRP9	Q06506	573 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	SDH5	Q08230	162 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	MDM12	Q92328	271 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	TRP2	P00899	507 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	PRP9	P19736	530 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	AAD3	P25612	363 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	SGM1	P47166	707 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	VPS30	Q02948	557 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	YMR018W	Q04364	514 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	AGE1	Q04412	482 aa		3.86	□□□□□ -1.79
TOP1	YOL006C	YDR341C	Q05506	607 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	LCB5	Q06147	687 aa	Known RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	CLF1	Q12309	687 aa	Predicted RBP	3.86	□□□□□ -1.79
TOP1	YOL006C	PRP5	P21372	849 aa	Predicted RBP	3.85	□□□□□ -1.79
TOP1	YOL006C	NUD1	P32336	851 aa		3.85	□□□□□ -1.79
TOP1	YOL006C	VPS8	P39702	1274 aa		3.85	□□□□□ -1.79
TOP1	YOL006C	HIS6	P40545	261 aa		3.85	□□□□□ -1.79
TOP1	YOL006C	YNL058C	P53947	316 aa		3.85	□□□□□ -1.79
TOP1	YOL006C	AEP2	P22136	580 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
TOP1	YOL006C	HXT5	P38695	592 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	RAD55	P38953	406 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	FLP1	P03870	423 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	VBA3	P25594	458 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	YKL100C	P34248	587 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	BCD1	P38772	366 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	ACA1	P39970	489 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	XKS1	P42826	600 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	GNP1	P48813	663 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	NPY1	P53164	384 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	MEP3	P53390	489 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
TOP1	YOL006C	YLR257W	Q06146	321 aa	Known RBP	3.84	□□□□□ -1.79
TOP1	YOL006C	ATG20	Q07528	640 aa		3.84	□□□□□ -1.79
TOP1	YOL006C	NAT1	P12945	854 aa	Known RBP	3.83	□□□□□ -1.8
TOP1	YOL006C	ACE2	P21192	770 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms