RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W GCR1P07261 785 aa6.36□□□□□ -1.39
CPR8YNR028W RPS4AP0CX35 261 aaKnown RBP6.36□□□□□ -1.39
CPR8YNR028W RPS4BP0CX36 261 aaKnown RBP6.36□□□□□ -1.39
CPR8YNR028W SMY2P32909 740 aaKnown RBP6.36□□□□□ -1.39
CPR8YNR028W HSE1P38753 452 aa6.36□□□□□ -1.39
CPR8YNR028W RKM2Q03942 479 aa6.36□□□□□ -1.39
CPR8YNR028W SVF1Q05515 481 aa6.36□□□□□ -1.39
CPR8YNR028W NFS1P25374 497 aa6.35□□□□□ -1.39
CPR8YNR028W MMM1P41800 426 aa6.35□□□□□ -1.39
CPR8YNR028W MSB1P21339 1137 aaKnown RBP6.34□□□□□ -1.39
CPR8YNR028W ALT1P52893 592 aa6.34□□□□□ -1.39
CPR8YNR028W YGR130CP53278 816 aa6.34□□□□□ -1.39
CPR8YNR028W SIW14P53965 281 aa6.34□□□□□ -1.39
CPR8YNR028W RET1P22276 1149 aaKnown RBP6.33□□□□□ -1.4
CPR8YNR028W NAP1P25293 417 aaKnown RBP6.33□□□□□ -1.4
CPR8YNR028W WHI3P34761 661 aaKnown RBP6.33□□□□□ -1.4
CPR8YNR028W CIT3P43635 486 aa6.33□□□□□ -1.4
CPR8YNR028W ROD1Q02805 837 aa6.33□□□□□ -1.4
CPR8YNR028W RAD27P26793 382 aa6.32□□□□□ -1.4
CPR8YNR028W MNR2P35724 969 aa6.32□□□□□ -1.4
CPR8YNR028W ENT3P47160 408 aa6.32□□□□□ -1.4
CPR8YNR028W GNP1P48813 663 aa6.32□□□□□ -1.4
CPR8YNR028W RSA3Q05942 220 aaKnown RBP6.32□□□□□ -1.4
CPR8YNR028W YLR257WQ06146 321 aaKnown RBP6.32□□□□□ -1.4
CPR8YNR028W JIP5Q06214 492 aaPredicted RBP6.32□□□□□ -1.4
CPR8YNR028W YOR059CQ08448 450 aaKnown RBP6.32□□□□□ -1.4
CPR8YNR028W RTT10Q08924 1013 aa6.32□□□□□ -1.4
CPR8YNR028W GLT1Q12680 2145 aaKnown RBP6.31□□□□□ -1.4
CPR8YNR028W HXT13P39924 564 aa6.31□□□□□ -1.4
CPR8YNR028W VPS53P47061 822 aa6.31□□□□□ -1.4
CPR8YNR028W HXT17P53631 564 aa6.31□□□□□ -1.4
CPR8YNR028W HXT15P54854 567 aa6.31□□□□□ -1.4
CPR8YNR028W EAR1Q03212 550 aa6.31□□□□□ -1.4
CPR8YNR028W MED7Q08278 222 aa6.31□□□□□ -1.4
CPR8YNR028W TRP3P00937 484 aa6.3□□□□□ -1.4
CPR8YNR028W CDC34P14682 295 aa6.3□□□□□ -1.4
CPR8YNR028W MKK2P32491 506 aa6.3□□□□□ -1.4
CPR8YNR028W AFG2P32794 780 aa6.3□□□□□ -1.4
CPR8YNR028W PAM1P37304 830 aaKnown RBP6.3□□□□□ -1.4
CPR8YNR028W QNS1P38795 714 aaKnown RBP6.3□□□□□ -1.4
CPR8YNR028W RCM1P53972 490 aa6.3□□□□□ -1.4
CPR8YNR028W ALO1P54783 526 aaKnown RBP6.3□□□□□ -1.4
CPR8YNR028W TPP1Q03796 238 aa6.3□□□□□ -1.4
CPR8YNR028W TMA46Q12000 345 aaKnown RBP6.3□□□□□ -1.4
CPR8YNR028W CYC7P00045 113 aa6.29□□□□□ -1.4
CPR8YNR028W CLN2P20438 545 aa6.29□□□□□ -1.4
CPR8YNR028W NMD3P38861 518 aaKnown RBP6.29□□□□□ -1.4
CPR8YNR028W MAD1P40957 749 aa6.29□□□□□ -1.4
CPR8YNR028W RAT1Q02792 1006 aaKnown RBP6.29□□□□□ -1.4
CPR8YNR028W PUS7Q08647 676 aaKnown RBP6.29□□□□□ -1.4
CPR8YNR028W HRK1Q08732 759 aaKnown RBP6.29□□□□□ -1.4
CPR8YNR028W NSI1Q12457 570 aa6.29□□□□□ -1.4
CPR8YNR028W PTC5Q12511 572 aa6.29□□□□□ -1.4
CPR8YNR028W YKR073CP36153 106 aa6.28□□□□□ -1.4
CPR8YNR028W ALG3P38179 458 aa6.28□□□□□ -1.4
CPR8YNR028W YVC1Q12324 675 aa6.28□□□□□ -1.4
CPR8YNR028W SYP1P25623 870 aaKnown RBP6.27□□□□□ -1.41
CPR8YNR028W DUT1P33317 147 aa6.27□□□□□ -1.41
CPR8YNR028W TOS1P38288 455 aa6.27□□□□□ -1.41
CPR8YNR028W NOP7P53261 605 aaKnown RBP6.27□□□□□ -1.41
CPR8YNR028W RER2P35196 286 aa6.26□□□□□ -1.41
CPR8YNR028W MET10P39692 1035 aa6.26□□□□□ -1.41
CPR8YNR028W OYE3P41816 400 aaPredicted RBP6.26□□□□□ -1.41
CPR8YNR028W VPS16Q03308 798 aa6.26□□□□□ -1.41
CPR8YNR028W PIN2Q12057 282 aa6.26□□□□□ -1.41
CPR8YNR028W OMA1P36163 345 aa6.25□□□□□ -1.41
CPR8YNR028W YJL045WP47052 634 aa6.25□□□□□ -1.41
CPR8YNR028W CWC24P53769 259 aa6.25□□□□□ -1.41
CPR8YNR028W GCD1P09032 578 aaPredicted RBP6.24□□□□□ -1.41
CPR8YNR028W DBP5P20449 482 aaKnown RBP6.24□□□□□ -1.41
CPR8YNR028W KIP1P28742 1111 aa6.24□□□□□ -1.41
CPR8YNR028W CNN1P43618 361 aa6.24□□□□□ -1.41
CPR8YNR028W MAC1P35192 417 aa6.23□□□□□ -1.41
CPR8YNR028W FAA4P47912 694 aaKnown RBP6.23□□□□□ -1.41
CPR8YNR028W EEB1Q02891 456 aa6.23□□□□□ -1.41
CPR8YNR028W GDE1Q02979 1223 aa6.23□□□□□ -1.41
CPR8YNR028W TRE1Q08919 783 aa6.23□□□□□ -1.41
CPR8YNR028W TRP2P00899 507 aaKnown RBP6.22□□□□□ -1.41
CPR8YNR028W LYP1P32487 611 aa6.22□□□□□ -1.41
CPR8YNR028W LIP5P32875 414 aa6.22□□□□□ -1.41
CPR8YNR028W RGD1P38339 666 aa6.22□□□□□ -1.41
CPR8YNR028W YHL012WP38709 493 aa6.22□□□□□ -1.41
CPR8YNR028W GPB2P39717 880 aa6.22□□□□□ -1.41
CPR8YNR028W INP52P50942 1183 aa6.22□□□□□ -1.41
CPR8YNR028W YGR053CP53234 283 aa6.22□□□□□ -1.41
CPR8YNR028W SDH1Q00711 640 aa6.22□□□□□ -1.41
CPR8YNR028W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
CPR8YNR028W TIF35Q04067 274 aaKnown RBP6.22□□□□□ -1.41
CPR8YNR028W YPL260WQ08977 551 aa6.22□□□□□ -1.41
CPR8YNR028W SPO21Q12411 609 aa6.22□□□□□ -1.41
CPR8YNR028W MLS1P30952 554 aa6.21□□□□□ -1.42
CPR8YNR028W PUB1P32588 453 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
CPR8YNR028W YSC84P32793 468 aa6.21□□□□□ -1.42
CPR8YNR028W MCM7P38132 845 aa6.21□□□□□ -1.42
CPR8YNR028W TYW3P53177 273 aa6.21□□□□□ -1.42
CPR8YNR028W MAG2Q06436 670 aaKnown RBP6.21□□□□□ -1.42
CPR8YNR028W AOS1Q06624 347 aa6.21□□□□□ -1.42
CPR8YNR028W BRE4Q07660 1125 aa6.21□□□□□ -1.42
CPR8YNR028W PRO1P32264 428 aa6.2□□□□□ -1.42
CPR8YNR028W PEX7P39108 375 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms