RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C FIG2P25653 1609 aa9.57□□□□□ -0.88
RPD3YNL330C SPO11P23179 398 aa9.56□□□□□ -0.88
RPD3YNL330C MAP2P38174 421 aaKnown RBP9.56□□□□□ -0.88
RPD3YNL330C LYS14P40971 790 aa9.56□□□□□ -0.88
RPD3YNL330C JJJ2P46997 583 aa9.56□□□□□ -0.88
RPD3YNL330C RPT6Q01939 405 aaKnown RBP9.56□□□□□ -0.88
RPD3YNL330C EBS1Q03466 884 aaKnown RBP9.56□□□□□ -0.88
RPD3YNL330C IRC3Q06683 689 aa9.56□□□□□ -0.88
RPD3YNL330C YKL068W-AQ3E826 78 aa9.56□□□□□ -0.88
RPD3YNL330C UBP1P25037 809 aa9.56□□□□□ -0.88
RPD3YNL330C SPB4P25808 606 aaPredicted RBP9.56□□□□□ -0.88
RPD3YNL330C CCC2P38995 1004 aa9.56□□□□□ -0.88
RPD3YNL330C VID27P40157 782 aa9.56□□□□□ -0.88
RPD3YNL330C SEC9P40357 651 aa9.56□□□□□ -0.88
RPD3YNL330C YFR006WP43590 535 aa9.56□□□□□ -0.88
RPD3YNL330C RRB1Q04225 511 aaKnown RBP9.56□□□□□ -0.88
RPD3YNL330C SPP382Q06411 708 aaPredicted RBP9.56□□□□□ -0.88
RPD3YNL330C CIT1P00890 479 aa9.55□□□□□ -0.88
RPD3YNL330C RPS6AP0CX37 236 aaKnown RBP9.55□□□□□ -0.88
RPD3YNL330C RPS6BP0CX38 236 aaPredicted RBP9.55□□□□□ -0.88
RPD3YNL330C DEP1P31385 405 aa9.55□□□□□ -0.88
RPD3YNL330C SHM1P37292 490 aaPredicted RBP9.55□□□□□ -0.88
RPD3YNL330C MCX1P38323 520 aaPredicted RBP9.55□□□□□ -0.88
RPD3YNL330C TOM71P38825 639 aaKnown RBP9.55□□□□□ -0.88
RPD3YNL330C CCT4P39078 528 aaKnown RBP9.55□□□□□ -0.88
RPD3YNL330C ERG5P54781 538 aa9.55□□□□□ -0.88
RPD3YNL330C GIS4Q04233 774 aa9.55□□□□□ -0.88
RPD3YNL330C YLR287CQ05881 355 aa9.55□□□□□ -0.88
RPD3YNL330C RRP6Q12149 733 aaKnown RBP9.55□□□□□ -0.88
RPD3YNL330C CLF1Q12309 687 aaPredicted RBP9.55□□□□□ -0.88
RPD3YNL330C SNF3P10870 884 aa9.54□□□□□ -0.88
RPD3YNL330C THR4P16120 514 aaKnown RBP9.54□□□□□ -0.88
RPD3YNL330C RPO26P20435 155 aa9.54□□□□□ -0.88
RPD3YNL330C SIT4P20604 311 aa9.54□□□□□ -0.88
RPD3YNL330C MIP6P38760 659 aaKnown RBP9.54□□□□□ -0.88
RPD3YNL330C BUD16P39988 312 aa9.54□□□□□ -0.88
RPD3YNL330C MVP1P40959 511 aaKnown RBP9.54□□□□□ -0.88
RPD3YNL330C HPC2Q01448 625 aa9.54□□□□□ -0.88
RPD3YNL330C UTP5Q04177 643 aaKnown RBP9.54□□□□□ -0.88
RPD3YNL330C VAC14Q06708 880 aa9.54□□□□□ -0.88
RPD3YNL330C TLG2Q08144 397 aa9.54□□□□□ -0.88
RPD3YNL330C MTF2P10849 440 aa9.53□□□□□ -0.88
RPD3YNL330C MAK11P20484 414 aaKnown RBP9.53□□□□□ -0.88
RPD3YNL330C RPL8BP29453 256 aaKnown RBP9.53□□□□□ -0.88
RPD3YNL330C BYE1P36106 594 aa9.53□□□□□ -0.88
RPD3YNL330C STT3P39007 718 aaKnown RBP9.53□□□□□ -0.88
RPD3YNL330C VPS8P39702 1274 aa9.53□□□□□ -0.88
RPD3YNL330C VTC2P43585 828 aa9.53□□□□□ -0.88
RPD3YNL330C AIP1P46680 615 aaKnown RBP9.53□□□□□ -0.88
RPD3YNL330C BOP3P53958 396 aa9.53□□□□□ -0.88
RPD3YNL330C MRS2Q01926 470 aa9.53□□□□□ -0.88
RPD3YNL330C TRS120Q04183 1289 aa9.53□□□□□ -0.88
RPD3YNL330C RIX7Q07844 837 aaKnown RBP9.53□□□□□ -0.88
RPD3YNL330C NEW1Q08972 1196 aaKnown RBP9.53□□□□□ -0.88
RPD3YNL330C OSH2Q12451 1283 aa9.53□□□□□ -0.88
RPD3YNL330C FOB1O13329 566 aa9.52□□□□□ -0.89
RPD3YNL330C STI1P15705 589 aaKnown RBP RIP-Chip data9.52□□□□□ -0.89not detected
RPD3YNL330C MSH1P25846 959 aa9.52□□□□□ -0.89
RPD3YNL330C PSO2P30620 661 aa9.52□□□□□ -0.89
RPD3YNL330C PRO3P32263 286 aaKnown RBP9.52□□□□□ -0.89
RPD3YNL330C SRB4P32569 687 aa9.52□□□□□ -0.89
RPD3YNL330C CCT3P39077 534 aaKnown RBP9.52□□□□□ -0.89
RPD3YNL330C ATG3P40344 310 aa9.52□□□□□ -0.89
RPD3YNL330C SHQ1P40486 507 aaPredicted RBP9.52□□□□□ -0.89
RPD3YNL330C UBA2P52488 636 aa9.52□□□□□ -0.89
RPD3YNL330C LSC2P53312 427 aa9.52□□□□□ -0.89
RPD3YNL330C RET3P53600 189 aa9.52□□□□□ -0.89
RPD3YNL330C ATG23Q06671 453 aa9.52□□□□□ -0.89
RPD3YNL330C WRS1Q12109 432 aaKnown RBP9.52□□□□□ -0.89
RPD3YNL330C CLB1P24868 471 aa9.51□□□□□ -0.89
RPD3YNL330C TOS1P38288 455 aa9.51□□□□□ -0.89
RPD3YNL330C VFA1P40080 203 aa9.51□□□□□ -0.89
RPD3YNL330C EFM4P40516 257 aa9.51□□□□□ -0.89
RPD3YNL330C YAP5P40574 245 aa9.51□□□□□ -0.89
RPD3YNL330C THI6P41835 540 aa9.51□□□□□ -0.89
RPD3YNL330C APL6P46682 809 aa9.51□□□□□ -0.89
RPD3YNL330C SDA1P53313 767 aaKnown RBP9.51□□□□□ -0.89
RPD3YNL330C RNT1Q02555 471 aa9.51□□□□□ -0.89
RPD3YNL330C SLK19Q08581 821 aaKnown RBP9.51□□□□□ -0.89
RPD3YNL330C DSE3Q08729 430 aa9.51□□□□□ -0.89
RPD3YNL330C TUF1P02992 437 aaKnown RBP9.5□□□□□ -0.89
RPD3YNL330C CAF20P12962 161 aaKnown RBP9.5□□□□□ -0.89
RPD3YNL330C NFU1P32860 256 aa9.5□□□□□ -0.89
RPD3YNL330C SAS3P34218 831 aa9.5□□□□□ -0.89
RPD3YNL330C BCH2P36122 765 aa9.5□□□□□ -0.89
RPD3YNL330C VPS41P38959 992 aa9.5□□□□□ -0.89
RPD3YNL330C TIF4632P39936 914 aaKnown RBP9.5□□□□□ -0.89
RPD3YNL330C YGR153WP48238 217 aa9.5□□□□□ -0.89
RPD3YNL330C LYS4P49367 693 aaPredicted RBP9.5□□□□□ -0.89
RPD3YNL330C SCY1P53009 804 aa9.5□□□□□ -0.89
RPD3YNL330C YMR074CQ04773 145 aa9.5□□□□□ -0.89
RPD3YNL330C PLP2Q12017 286 aa9.5□□□□□ -0.89
RPD3YNL330C SPO12P17123 173 aa9.49□□□□□ -0.89
RPD3YNL330C PFF1P38244 976 aa9.49□□□□□ -0.89
RPD3YNL330C PES4P39684 611 aa9.49□□□□□ -0.89
RPD3YNL330C HFM1P51979 1187 aa9.49□□□□□ -0.89
RPD3YNL330C SMD2Q06217 110 aaKnown RBP9.49□□□□□ -0.89
RPD3YNL330C YAP7Q08182 245 aa9.49□□□□□ -0.89
RPD3YNL330C KEL3Q08979 651 aaPredicted RBP9.49□□□□□ -0.89
RPD3YNL330C OM45P16547 393 aa9.48□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms