RNA–Protein interactions for RNA: YNL317W

PFS2, Transcript of Integral subunit of the pre-mRNA CPF complex, yeastyeast

Gene PFS2, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFS2YNL317W CBP3P21560 335 aa8.51□□□□□ -1.05
PFS2YNL317W LOS1P33418 1100 aaPredicted RBP8.51□□□□□ -1.05
PFS2YNL317W MAD1P40957 749 aa8.51□□□□□ -1.05
PFS2YNL317W SNU71P53207 620 aaKnown RBP8.51□□□□□ -1.05
PFS2YNL317W ZDS2P54786 942 aa8.51□□□□□ -1.05
PFS2YNL317W TFB2Q02939 513 aa8.51□□□□□ -1.05
PFS2YNL317W NGL3Q03210 505 aa8.51□□□□□ -1.05
PFS2YNL317W INP2Q03824 705 aa8.51□□□□□ -1.05
PFS2YNL317W SPC24Q04477 213 aa8.51□□□□□ -1.05
PFS2YNL317W YMR085WP0CF18 432 aa8.5□□□□□ -1.05
PFS2YNL317W RPS6AP0CX37 236 aaKnown RBP8.5□□□□□ -1.05
PFS2YNL317W RPS6BP0CX38 236 aaPredicted RBP8.5□□□□□ -1.05
PFS2YNL317W SPO11P23179 398 aa8.5□□□□□ -1.05
PFS2YNL317W RAD57P25301 460 aa8.5□□□□□ -1.05
PFS2YNL317W PAP1P29468 568 aaKnown RBP8.5□□□□□ -1.05
PFS2YNL317W RRP14P36080 434 aaKnown RBP8.5□□□□□ -1.05
PFS2YNL317W SHM1P37292 490 aaPredicted RBP8.5□□□□□ -1.05
PFS2YNL317W TDA3P38758 523 aa8.5□□□□□ -1.05
PFS2YNL317W YMR124WP39523 943 aaKnown RBP8.5□□□□□ -1.05
PFS2YNL317W DOT5P40553 215 aa8.5□□□□□ -1.05
PFS2YNL317W EPS1P40557 701 aa8.5□□□□□ -1.05
PFS2YNL317W FAR8Q05040 523 aa8.5□□□□□ -1.05
PFS2YNL317W YLR287CQ05881 355 aa8.5□□□□□ -1.05
PFS2YNL317W RSA3Q05942 220 aaKnown RBP8.5□□□□□ -1.05
PFS2YNL317W MRD1Q06106 887 aaKnown RBP8.5□□□□□ -1.05
PFS2YNL317W YLR177WQ06251 628 aa8.5□□□□□ -1.05
PFS2YNL317W NDL1Q06568 189 aa8.5□□□□□ -1.05
PFS2YNL317W NEW1Q08972 1196 aaKnown RBP8.5□□□□□ -1.05
PFS2YNL317W RPB2P08518 1224 aaKnown RBP8.49□□□□□ -1.05
PFS2YNL317W MPH3P0CE00 602 aa8.49□□□□□ -1.05
PFS2YNL317W KEX2P13134 814 aa8.49□□□□□ -1.05
PFS2YNL317W PFK2P16862 959 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
PFS2YNL317W LIN1P38852 340 aaPredicted RBP8.49□□□□□ -1.05
PFS2YNL317W ADE16P54113 591 aaKnown RBP8.49□□□□□ -1.05
PFS2YNL317W GTR1Q00582 310 aa8.49□□□□□ -1.05
PFS2YNL317W BET4Q00618 327 aa8.49□□□□□ -1.05
PFS2YNL317W YML119WQ03208 357 aa8.49□□□□□ -1.05
PFS2YNL317W POB3Q04636 552 aaKnown RBP8.49□□□□□ -1.05
PFS2YNL317W PIF1P07271 859 aa8.48□□□□□ -1.05
PFS2YNL317W SPO12P17123 173 aa8.48□□□□□ -1.05
PFS2YNL317W IME1P21190 360 aa8.48□□□□□ -1.05
PFS2YNL317W RPL5P26321 297 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W URA1P28272 314 aaPredicted RBP8.48□□□□□ -1.05
PFS2YNL317W BMH1P29311 267 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W LAS1P36146 502 aaPredicted RBP8.48□□□□□ -1.05
PFS2YNL317W MPH1P40562 993 aa8.48□□□□□ -1.05
PFS2YNL317W RPN11P43588 306 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W ZPR1P53303 486 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W VTI1Q04338 217 aa8.48□□□□□ -1.05
PFS2YNL317W SLK19Q08581 821 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W RPC82P32349 654 aa8.48□□□□□ -1.05
PFS2YNL317W UBP14P38237 781 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W SPP381P38282 291 aaPredicted RBP8.48□□□□□ -1.05
PFS2YNL317W FOX2Q02207 900 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W YPL109CQ02981 657 aa8.48□□□□□ -1.05
PFS2YNL317W YKU80Q04437 629 aa8.48□□□□□ -1.05
PFS2YNL317W MAG2Q06436 670 aaKnown RBP8.48□□□□□ -1.05
PFS2YNL317W TAF10Q12030 206 aa8.48□□□□□ -1.05
PFS2YNL317W SSK22P25390 1331 aaPredicted RBP8.47□□□□□ -1.05
PFS2YNL317W NUF2P33895 451 aa8.47□□□□□ -1.05
PFS2YNL317W HEK2P38199 381 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
PFS2YNL317W PIH1P38768 344 aa8.47□□□□□ -1.05
PFS2YNL317W TOM71P38825 639 aaKnown RBP8.47□□□□□ -1.05
PFS2YNL317W RPN10P38886 268 aaKnown RBP8.47□□□□□ -1.05
PFS2YNL317W YAP5P40574 245 aa8.47□□□□□ -1.05
PFS2YNL317W MDJ2P42834 146 aa8.47□□□□□ -1.05
PFS2YNL317W RSC8P43609 557 aaKnown RBP8.47□□□□□ -1.05
PFS2YNL317W NOB1Q08444 459 aaKnown RBP8.47□□□□□ -1.05
PFS2YNL317W ARG4P04076 463 aaPredicted RBP8.46□□□□□ -1.06
PFS2YNL317W TAL1P15019 335 aaKnown RBP8.46□□□□□ -1.06
PFS2YNL317W VAN1P23642 535 aa8.46□□□□□ -1.06
PFS2YNL317W SLA1P32790 1244 aa8.46□□□□□ -1.06
PFS2YNL317W OAF3P36023 863 aa8.46□□□□□ -1.06
PFS2YNL317W SIP3P38717 1229 aa8.46□□□□□ -1.06
PFS2YNL317W MIP6P38760 659 aaKnown RBP8.46□□□□□ -1.06
PFS2YNL317W BCD1P38772 366 aa8.46□□□□□ -1.06
PFS2YNL317W LAM1P38851 1228 aa8.46□□□□□ -1.06
PFS2YNL317W TIF4632P39936 914 aaKnown RBP8.46□□□□□ -1.06
PFS2YNL317W TMA22P47089 198 aaPredicted RBP8.46□□□□□ -1.06
PFS2YNL317W YGR237CP50089 785 aa8.46□□□□□ -1.06
PFS2YNL317W ALE1Q08548 619 aa8.46□□□□□ -1.06
PFS2YNL317W APL5Q08951 932 aaKnown RBP8.46□□□□□ -1.06
PFS2YNL317W SSF2Q12153 453 aaPredicted RBP8.46□□□□□ -1.06
PFS2YNL317W NKP1Q12493 238 aa8.46□□□□□ -1.06
PFS2YNL317W HCA4P20448 770 aaKnown RBP8.45□□□□□ -1.06
PFS2YNL317W MCM3P24279 971 aaKnown RBP8.45□□□□□ -1.06
PFS2YNL317W YKR023WP36119 530 aaKnown RBP8.45□□□□□ -1.06
PFS2YNL317W SET1P38827 1080 aaKnown RBP8.45□□□□□ -1.06
PFS2YNL317W REV7P38927 245 aa8.45□□□□□ -1.06
PFS2YNL317W SIT1P39980 628 aa8.45□□□□□ -1.06
PFS2YNL317W KAP123P40069 1113 aaKnown RBP8.45□□□□□ -1.06
PFS2YNL317W VFA1P40080 203 aa8.45□□□□□ -1.06
PFS2YNL317W ERP6P53198 216 aa8.45□□□□□ -1.06
PFS2YNL317W YNL144CP53907 740 aa8.45□□□□□ -1.06
PFS2YNL317W ALD3P54114 506 aa8.45□□□□□ -1.06
PFS2YNL317W UME1Q03010 460 aa8.45□□□□□ -1.06
PFS2YNL317W EBS1Q03466 884 aaKnown RBP8.45□□□□□ -1.06
PFS2YNL317W GNT1Q12096 491 aa8.45□□□□□ -1.06
PFS2YNL317W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
PFS2YNL317W UTP10P42945 1769 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms