RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W VMA4P22203 233 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W EBP2P36049 427 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W BAP2P38084 609 aa1.85□□□□□ -2.11
SEC21YNL287W GTS1P40956 396 aa1.85□□□□□ -2.11
SEC21YNL287W TPP1Q03796 238 aa1.85□□□□□ -2.11
SEC21YNL287W RKM2Q03942 479 aa1.85□□□□□ -2.11
SEC21YNL287W GSF2Q04697 403 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W YLR257WQ06146 321 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W YCS4Q06156 1176 aa1.85□□□□□ -2.11
SEC21YNL287W AVO1Q08236 1176 aa1.85□□□□□ -2.11
SEC21YNL287W RPS13P05756 151 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W RET1P22276 1149 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W ERP5P38819 212 aa1.85□□□□□ -2.11
SEC21YNL287W SHU2P38957 223 aa1.85□□□□□ -2.11
SEC21YNL287W MON1P53129 644 aa1.85□□□□□ -2.11
SEC21YNL287W NOC3Q07896 663 aaPredicted RBP1.85□□□□□ -2.11
SEC21YNL287W CTS1P29029 562 aa1.84□□□□□ -2.11
SEC21YNL287W YKL077WP36081 392 aa1.84□□□□□ -2.11
SEC21YNL287W YHL012WP38709 493 aa1.84□□□□□ -2.11
SEC21YNL287W ETP1P38748 585 aaKnown RBP1.84□□□□□ -2.11
SEC21YNL287W RPS0BP46654 252 aaKnown RBP1.84□□□□□ -2.11
SEC21YNL287W ENV11P53246 860 aa1.84□□□□□ -2.11
SEC21YNL287W SNO2P53823 222 aa1.84□□□□□ -2.11
SEC21YNL287W PHO4P07270 312 aaKnown RBP1.84□□□□□ -2.12
SEC21YNL287W MSH3P25336 1018 aa1.84□□□□□ -2.12
SEC21YNL287W TOD6P34219 525 aa1.84□□□□□ -2.12
SEC21YNL287W SAM37P50110 327 aa1.84□□□□□ -2.12
SEC21YNL287W AFG2P32794 780 aa1.83□□□□□ -2.12
SEC21YNL287W ABZ1P37254 787 aaPredicted RBP1.83□□□□□ -2.12
SEC21YNL287W XKS1P42826 600 aa1.83□□□□□ -2.12
SEC21YNL287W MTR4P47047 1073 aaKnown RBP1.83□□□□□ -2.12
SEC21YNL287W YJL045WP47052 634 aa1.83□□□□□ -2.12
SEC21YNL287W CWC22P53333 577 aaKnown RBP1.83□□□□□ -2.12
SEC21YNL287W TOS4Q06266 489 aa1.83□□□□□ -2.12
SEC21YNL287W RSC58Q07979 502 aa1.83□□□□□ -2.12
SEC21YNL287W RCL1Q08096 367 aaPredicted RBP1.83□□□□□ -2.12
SEC21YNL287W HRK1Q08732 759 aaKnown RBP1.83□□□□□ -2.12
SEC21YNL287W SEC23P15303 768 aaKnown RBP1.83□□□□□ -2.12
SEC21YNL287W YSC84P32793 468 aa1.83□□□□□ -2.12
SEC21YNL287W UGA4P32837 571 aa1.83□□□□□ -2.12
SEC21YNL287W PRP40P33203 583 aaKnown RBP1.83□□□□□ -2.12
SEC21YNL287W DOM34P33309 386 aa1.83□□□□□ -2.12
SEC21YNL287W QNS1P38795 714 aaKnown RBP1.83□□□□□ -2.12
SEC21YNL287W DUS4Q06063 367 aa1.83□□□□□ -2.12
SEC21YNL287W YBL113CQ7M4S9 792 aa1.83□□□□□ -2.12
SEC21YNL287W YLR358CO13565 187 aa1.82□□□□□ -2.12
SEC21YNL287W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12 RIP-Chip
SEC21YNL287W SSA1P10591 642 aaKnown RBP1.82□□□□□ -2.12
SEC21YNL287W SNF5P18480 905 aa1.82□□□□□ -2.12
SEC21YNL287W SWE1P32944 819 aa1.82□□□□□ -2.12
SEC21YNL287W CAB3P36076 571 aa1.82□□□□□ -2.12
SEC21YNL287W CIC1P38779 376 aaKnown RBP1.82□□□□□ -2.12
SEC21YNL287W ATG36P46983 293 aa1.82□□□□□ -2.12
SEC21YNL287W MDG1P53885 366 aa1.82□□□□□ -2.12
SEC21YNL287W RPL34AP87262 121 aaPredicted RBP1.82□□□□□ -2.12
SEC21YNL287W ULP1Q02724 621 aa1.82□□□□□ -2.12
SEC21YNL287W TAD3Q9URQ3 322 aa1.82□□□□□ -2.12
SEC21YNL287W CDC6P09119 513 aa1.82□□□□□ -2.12
SEC21YNL287W CDC3P32457 520 aaKnown RBP1.82□□□□□ -2.12
SEC21YNL287W VPS35P34110 944 aa1.82□□□□□ -2.12
SEC21YNL287W MNN4P36044 1178 aa1.82□□□□□ -2.12
SEC21YNL287W GRS1P38088 690 aaKnown RBP1.82□□□□□ -2.12
SEC21YNL287W YGL140CP53120 1219 aa1.82□□□□□ -2.12
SEC21YNL287W YPL109CQ02981 657 aa1.82□□□□□ -2.12
SEC21YNL287W IRC20Q06554 1556 aa1.82□□□□□ -2.12
SEC21YNL287W HSE1P38753 452 aa1.81□□□□□ -2.12
SEC21YNL287W NMD3P38861 518 aaKnown RBP1.81□□□□□ -2.12
SEC21YNL287W TAT2P38967 592 aa1.81□□□□□ -2.12
SEC21YNL287W VPS53P47061 822 aa1.81□□□□□ -2.12
SEC21YNL287W GCN5Q03330 439 aa1.81□□□□□ -2.12
SEC21YNL287W MET4P32389 672 aa1.81□□□□□ -2.12
SEC21YNL287W ADD66P36040 267 aa1.81□□□□□ -2.12
SEC21YNL287W SHM2P37291 469 aaKnown RBP1.81□□□□□ -2.12
SEC21YNL287W PEX28P38848 579 aa1.81□□□□□ -2.12
SEC21YNL287W MEF2P39677 819 aa1.81□□□□□ -2.12
SEC21YNL287W RPN3P40016 523 aaKnown RBP1.81□□□□□ -2.12
SEC21YNL287W SLI1P53304 468 aa1.81□□□□□ -2.12
SEC21YNL287W LAP2Q10740 671 aa1.81□□□□□ -2.12
SEC21YNL287W SRM1P21827 482 aa1.81□□□□□ -2.12
SEC21YNL287W LAM1P38851 1228 aa1.81□□□□□ -2.12
SEC21YNL287W SGD1Q06132 899 aa1.81□□□□□ -2.12
SEC21YNL287W RLP24Q07915 199 aaKnown RBP1.81□□□□□ -2.12
SEC21YNL287W RIB2Q12362 591 aaKnown RBP1.81□□□□□ -2.12
SEC21YNL287W HXK1P04806 485 aaKnown RBP1.8□□□□□ -2.12
SEC21YNL287W TAF13P11747 167 aa1.8□□□□□ -2.12
SEC21YNL287W PPX1P38698 397 aa1.8□□□□□ -2.12
SEC21YNL287W PIC2P40035 300 aa1.8□□□□□ -2.12
SEC21YNL287W SEC26P41810 973 aaKnown RBP1.8□□□□□ -2.12
SEC21YNL287W HNT2P49775 206 aa1.8□□□□□ -2.12
SEC21YNL287W PLB2Q03674 706 aa1.8□□□□□ -2.12
SEC21YNL287W ADI1Q03677 179 aa1.8□□□□□ -2.12
SEC21YNL287W NOP8Q08287 484 aaPredicted RBP1.8□□□□□ -2.12
SEC21YNL287W GIN4Q12263 1142 aa1.8□□□□□ -2.12
SEC21YNL287W GCD6P32501 712 aaKnown RBP1.8□□□□□ -2.12
SEC21YNL287W AIM26P32858 118 aa1.8□□□□□ -2.12
SEC21YNL287W PIK1P39104 1066 aa1.8□□□□□ -2.12
SEC21YNL287W DAK2P43550 591 aa1.8□□□□□ -2.12
SEC21YNL287W GNP1P48813 663 aa1.8□□□□□ -2.12
SEC21YNL287W PUS9Q12069 462 aa1.8□□□□□ -2.12
SEC21YNL287W SPS1P08458 490 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms