RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C GUP1P53154 560 aa4.71□□□□□ -1.66
WHI3YNL197C RAT1Q02792 1006 aaKnown RBP4.71□□□□□ -1.66
WHI3YNL197C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66 RIP-Chip
WHI3YNL197C PUF4P25339 888 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
WHI3YNL197C AFG2P32794 780 aa4.7□□□□□ -1.66
WHI3YNL197C RSP5P39940 809 aaKnown RBP4.7□□□□□ -1.66
WHI3YNL197C YIR007WP40566 764 aa4.7□□□□□ -1.66
WHI3YNL197C UTP22P53254 1237 aaPredicted RBP4.7□□□□□ -1.66
WHI3YNL197C FMP25Q08023 583 aa4.7□□□□□ -1.66
WHI3YNL197C MOT2P34909 587 aaKnown RBP4.69□□□□□ -1.66
WHI3YNL197C YKL077WP36081 392 aa4.69□□□□□ -1.66
WHI3YNL197C FPR3P38911 411 aaKnown RBP4.69□□□□□ -1.66
WHI3YNL197C IRR1P40541 1150 aa4.69□□□□□ -1.66
WHI3YNL197C EST2Q06163 884 aa4.69□□□□□ -1.66
WHI3YNL197C DED1P06634 604 aaKnown RBP4.69□□□□□ -1.66
WHI3YNL197C SYP1P25623 870 aaKnown RBP4.69□□□□□ -1.66
WHI3YNL197C CHZ1P40019 153 aaPredicted RBP4.69□□□□□ -1.66
WHI3YNL197C SPO20Q04359 397 aa4.69□□□□□ -1.66
WHI3YNL197C CAN1P04817 590 aa4.68□□□□□ -1.66
WHI3YNL197C ERR1P0CX10 437 aa4.68□□□□□ -1.66
WHI3YNL197C ERR2P0CX11 437 aa4.68□□□□□ -1.66
WHI3YNL197C SBP1P10080 294 aaKnown RBP4.68□□□□□ -1.66
WHI3YNL197C NAR1P23503 491 aaKnown RBP4.68□□□□□ -1.66
WHI3YNL197C MRP8P35719 219 aa4.68□□□□□ -1.66
WHI3YNL197C ADD66P36040 267 aa4.68□□□□□ -1.66
WHI3YNL197C YGR125WP53273 1036 aa4.68□□□□□ -1.66
WHI3YNL197C HPF1Q05164 967 aa4.68□□□□□ -1.66
WHI3YNL197C AOS1Q06624 347 aa4.68□□□□□ -1.66
WHI3YNL197C MET6P05694 767 aaKnown RBP4.67□□□□□ -1.66
WHI3YNL197C INO1P11986 533 aa4.67□□□□□ -1.66
WHI3YNL197C PDC5P16467 563 aaKnown RBP4.67□□□□□ -1.66
WHI3YNL197C ARL1P38116 183 aaKnown RBP4.67□□□□□ -1.66
WHI3YNL197C NEO1P40527 1151 aa4.67□□□□□ -1.66
WHI3YNL197C LEM3P42838 414 aa4.67□□□□□ -1.66
WHI3YNL197C SOK2P53438 785 aaPredicted RBP4.67□□□□□ -1.66
WHI3YNL197C TAF8Q03750 510 aa4.67□□□□□ -1.66
WHI3YNL197C PHO8P11491 566 aa4.67□□□□□ -1.66
WHI3YNL197C DBP5P20449 482 aaKnown RBP4.67□□□□□ -1.66
WHI3YNL197C PAN5P38787 379 aa4.67□□□□□ -1.66
WHI3YNL197C MNN1P39106 762 aa4.67□□□□□ -1.66
WHI3YNL197C CEM1P39525 442 aa4.67□□□□□ -1.66
WHI3YNL197C POL5P39985 1022 aaKnown RBP4.67□□□□□ -1.66
WHI3YNL197C MPH1P40562 993 aa4.67□□□□□ -1.66
WHI3YNL197C CNN1P43618 361 aa4.67□□□□□ -1.66
WHI3YNL197C GCV1P48015 400 aa4.67□□□□□ -1.66
WHI3YNL197C RKM2Q03942 479 aa4.67□□□□□ -1.66
WHI3YNL197C GIS4Q04233 774 aa4.67□□□□□ -1.66
WHI3YNL197C SPO75Q07798 868 aa4.67□□□□□ -1.66
WHI3YNL197C CIT1P00890 479 aa4.66□□□□□ -1.66
WHI3YNL197C PBY1P38254 753 aa4.66□□□□□ -1.66
WHI3YNL197C UTP8P53276 713 aaKnown RBP4.66□□□□□ -1.66
WHI3YNL197C MEC3Q02574 474 aa4.66□□□□□ -1.66
WHI3YNL197C YLR125WQ12138 136 aa4.66□□□□□ -1.66
WHI3YNL197C RKM4Q12504 494 aa4.66□□□□□ -1.66
WHI3YNL197C GPM1P00950 247 aaKnown RBP4.65□□□□□ -1.66
WHI3YNL197C KNS1P32350 737 aaPredicted RBP4.65□□□□□ -1.66
WHI3YNL197C GIP2P40036 548 aa4.65□□□□□ -1.66
WHI3YNL197C SIP5P40210 489 aaKnown RBP4.65□□□□□ -1.66
WHI3YNL197C MTR4P47047 1073 aaKnown RBP4.65□□□□□ -1.66
WHI3YNL197C RTA1P53047 317 aa4.65□□□□□ -1.66
WHI3YNL197C OSH2Q12451 1283 aa4.65□□□□□ -1.66
WHI3YNL197C HSP60P19882 572 aaKnown RBP4.65□□□□□ -1.67
WHI3YNL197C BET3P36149 193 aa4.65□□□□□ -1.67
WHI3YNL197C MBP1P39678 833 aa4.65□□□□□ -1.67
WHI3YNL197C SPO74P45819 413 aa4.65□□□□□ -1.67
WHI3YNL197C YGL176CP46945 554 aa4.65□□□□□ -1.67
WHI3YNL197C YJR142WP47173 342 aa4.65□□□□□ -1.67
WHI3YNL197C ERP6P53198 216 aa4.65□□□□□ -1.67
WHI3YNL197C POB3Q04636 552 aaKnown RBP4.65□□□□□ -1.67
WHI3YNL197C EAF1Q06337 982 aa4.65□□□□□ -1.67
WHI3YNL197C SLP1Q12232 587 aa4.65□□□□□ -1.67
WHI3YNL197C ERS1P17261 260 aa4.64□□□□□ -1.67
WHI3YNL197C ALG3P38179 458 aa4.64□□□□□ -1.67
WHI3YNL197C SPO71Q03868 1245 aa4.64□□□□□ -1.67
WHI3YNL197C UBX5Q06682 500 aa4.64□□□□□ -1.67
WHI3YNL197C PIN4P34217 668 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
WHI3YNL197C YKL107WP34251 309 aa4.64□□□□□ -1.67
WHI3YNL197C GGA2P38817 585 aaKnown RBP4.64□□□□□ -1.67
WHI3YNL197C TED1P40533 473 aa4.64□□□□□ -1.67
WHI3YNL197C MAL11P53048 616 aa4.64□□□□□ -1.67
WHI3YNL197C GAL11P19659 1081 aa4.63□□□□□ -1.67
WHI3YNL197C HBS1P32769 611 aaKnown RBP4.63□□□□□ -1.67
WHI3YNL197C REI1P38344 393 aaPredicted RBP4.63□□□□□ -1.67
WHI3YNL197C ARE1P25628 610 aa4.62□□□□□ -1.67
WHI3YNL197C PGM2P37012 569 aaKnown RBP4.62□□□□□ -1.67
WHI3YNL197C MCM7P38132 845 aa4.62□□□□□ -1.67
WHI3YNL197C KRI1P42846 591 aaKnown RBP4.62□□□□□ -1.67
WHI3YNL197C NCE103P53615 221 aa4.62□□□□□ -1.67
WHI3YNL197C TY4B-PA0A0B7P3V8 1104 aa4.62□□□□□ -1.67
WHI3YNL197C MLS1P30952 554 aa4.62□□□□□ -1.67
WHI3YNL197C THI4P32318 326 aa4.62□□□□□ -1.67
WHI3YNL197C GRX4P32642 244 aa4.62□□□□□ -1.67
WHI3YNL197C RGD1P38339 666 aa4.62□□□□□ -1.67
WHI3YNL197C ALR2P43553 858 aa4.62□□□□□ -1.67
WHI3YNL197C YNR063WP53749 607 aa4.62□□□□□ -1.67
WHI3YNL197C ALG6Q12001 544 aaKnown RBP4.62□□□□□ -1.67
WHI3YNL197C ELG1Q12050 791 aa4.62□□□□□ -1.67
WHI3YNL197C TY4A-HQ6Q5P6 413 aa4.62□□□□□ -1.67
WHI3YNL197C YAR028WP39548 234 aa4.61□□□□□ -1.67
WHI3YNL197C JJJ3P47138 172 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 145.4 ms