RNA–Protein interactions for RNA: YNL171C

YNL171C, Transcript of Dubious open reading frame, yeast

Gene YNL171C, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YNL171C	YNL171C	SEC8	P32855	1065 aa		6.34	□□□□□ -1.39
YNL171C	YNL171C	PTC7	P38797	343 aa		6.34	□□□□□ -1.39
YNL171C	YNL171C	SLS1	P42900	643 aa		6.34	□□□□□ -1.39
YNL171C	YNL171C	AVO1	Q08236	1176 aa		6.34	□□□□□ -1.39
YNL171C	YNL171C	EXO5	P38289	585 aa		6.33	□□□□□ -1.4
YNL171C	YNL171C	YJR107W	P47145	328 aa		6.33	□□□□□ -1.4
YNL171C	YNL171C	OYE2	Q03558	400 aa	Known RBP	6.33	□□□□□ -1.4
YNL171C	YNL171C	YCS4	Q06156	1176 aa		6.33	□□□□□ -1.4
YNL171C	YNL171C	YDL177C	Q12257	170 aa		6.32	□□□□□ -1.4
YNL171C	YNL171C	NNK1	P36003	928 aa		6.31	□□□□□ -1.4
YNL171C	YNL171C	ARL1	P38116	183 aa	Known RBP	6.31	□□□□□ -1.4
YNL171C	YNL171C	NEM1	P38757	446 aa		6.31	□□□□□ -1.4
YNL171C	YNL171C	GIP4	P39732	760 aa		6.31	□□□□□ -1.4
YNL171C	YNL171C	GTS1	P40956	396 aa		6.31	□□□□□ -1.4
YNL171C	YNL171C	DAL4	Q04895	635 aa		6.31	□□□□□ -1.4
YNL171C	YNL171C	PUS7	Q08647	676 aa	Known RBP	6.31	□□□□□ -1.4
YNL171C	YNL171C	NMD3	P38861	518 aa	Known RBP	6.3	□□□□□ -1.4
YNL171C	YNL171C	NOP7	P53261	605 aa	Known RBP	6.3	□□□□□ -1.4
YNL171C	YNL171C	TPP1	Q03796	238 aa		6.3	□□□□□ -1.4
YNL171C	YNL171C	KAR2	P16474	682 aa	Known RBP	6.29	□□□□□ -1.4
YNL171C	YNL171C	PRP6	P19735	899 aa	Predicted RBP	6.29	□□□□□ -1.4
YNL171C	YNL171C	MCM2	P29469	868 aa		6.29	□□□□□ -1.4
YNL171C	YNL171C	AIM3	P38266	947 aa	Known RBP	6.29	□□□□□ -1.4
YNL171C	YNL171C	RVS167	P39743	482 aa	Known RBP	6.29	□□□□□ -1.4
YNL171C	YNL171C	PRP40	P33203	583 aa	Known RBP	6.28	□□□□□ -1.4
YNL171C	YNL171C	YKL077W	P36081	392 aa		6.28	□□□□□ -1.4
YNL171C	YNL171C	FLR1	P38124	548 aa		6.28	□□□□□ -1.4
YNL171C	YNL171C	FYV10	P40492	516 aa		6.28	□□□□□ -1.4
YNL171C	YNL171C	RPS26A	P39938	119 aa	Known RBP	6.27	□□□□□ -1.41
YNL171C	YNL171C	RPS26B	P39939	119 aa	Known RBP	6.27	□□□□□ -1.41
YNL171C	YNL171C	YGR122W	P53272	402 aa		6.27	□□□□□ -1.41
YNL171C	YNL171C	TOS4	Q06266	489 aa		6.27	□□□□□ -1.41
YNL171C	YNL171C	PEP7	P32609	515 aa		6.26	□□□□□ -1.41
YNL171C	YNL171C	ETP1	P38748	585 aa	Known RBP	6.26	□□□□□ -1.41
YNL171C	YNL171C	MRPL22	P53881	309 aa		6.26	□□□□□ -1.41
YNL171C	YNL171C	SPR28	Q04921	423 aa		6.26	□□□□□ -1.41
YNL171C	YNL171C	HXK1	P04806	485 aa	Known RBP	6.25	□□□□□ -1.41
YNL171C	YNL171C	FAA3	P39002	694 aa		6.25	□□□□□ -1.41
YNL171C	YNL171C	YAR028W	P39548	234 aa		6.25	□□□□□ -1.41
YNL171C	YNL171C	YLR257W	Q06146	321 aa	Known RBP	6.25	□□□□□ -1.41
YNL171C	YNL171C	SAM35	P14693	329 aa		6.24	□□□□□ -1.41
YNL171C	YNL171C	PAM1	P37304	830 aa	Known RBP	6.24	□□□□□ -1.41
YNL171C	YNL171C	RAD2	P07276	1031 aa		6.23	□□□□□ -1.41
YNL171C	YNL171C	CYC8	P14922	966 aa		6.23	□□□□□ -1.41
YNL171C	YNL171C	RET1	P22276	1149 aa	Known RBP	6.23	□□□□□ -1.41
YNL171C	YNL171C	UGA4	P32837	571 aa		6.23	□□□□□ -1.41
YNL171C	YNL171C	MRPS18	P42847	217 aa		6.23	□□□□□ -1.41
YNL171C	YNL171C	ULP1	Q02724	621 aa		6.23	□□□□□ -1.41
YNL171C	YNL171C	UTP5	Q04177	643 aa	Known RBP	6.23	□□□□□ -1.41
YNL171C	YNL171C	SVF1	Q05515	481 aa		6.23	□□□□□ -1.41
YNL171C	YNL171C	MET10	P39692	1035 aa		6.22	□□□□□ -1.41
YNL171C	YNL171C	NOG1	Q02892	647 aa	Known RBP	6.22	□□□□□ -1.41
YNL171C	YNL171C	RMD1	Q03441	430 aa		6.22	□□□□□ -1.41
YNL171C	YNL171C	ESF1	Q06344	628 aa	Known RBP	6.22	□□□□□ -1.41
YNL171C	YNL171C	MCD1	Q12158	566 aa		6.22	□□□□□ -1.41
YNL171C	YNL171C	SQT1	P35184	431 aa		6.21	□□□□□ -1.42
YNL171C	YNL171C	YHL012W	P38709	493 aa		6.21	□□□□□ -1.42
YNL171C	YNL171C	SHU2	P38957	223 aa		6.21	□□□□□ -1.42
YNL171C	YNL171C	RSM26	P47141	266 aa		6.21	□□□□□ -1.42
YNL171C	YNL171C	RIM8	P53179	542 aa		6.21	□□□□□ -1.42
YNL171C	YNL171C	ADI1	Q03677	179 aa		6.21	□□□□□ -1.42
YNL171C	YNL171C	PRE9	P23638	258 aa	Known RBP	6.2	□□□□□ -1.42
YNL171C	YNL171C	NAP1	P25293	417 aa	Known RBP	6.2	□□□□□ -1.42
YNL171C	YNL171C	MSH3	P25336	1018 aa		6.2	□□□□□ -1.42
YNL171C	YNL171C	XKS1	P42826	600 aa		6.2	□□□□□ -1.42
YNL171C	YNL171C	MTR4	P47047	1073 aa	Known RBP	6.2	□□□□□ -1.42
YNL171C	YNL171C	YPL109C	Q02981	657 aa		6.2	□□□□□ -1.42
YNL171C	YNL171C	RSA3	Q05942	220 aa	Known RBP	6.2	□□□□□ -1.42
YNL171C	YNL171C	JIP5	Q06214	492 aa	Predicted RBP	6.2	□□□□□ -1.42
YNL171C	YNL171C	PEX13	P80667	386 aa		6.19	□□□□□ -1.42
YNL171C	YNL171C	HDA2	Q06629	674 aa		6.19	□□□□□ -1.42
YNL171C	YNL171C	TOD6	P34219	525 aa		6.18	□□□□□ -1.42
YNL171C	YNL171C	YNR063W	P53749	607 aa		6.18	□□□□□ -1.42
YNL171C	YNL171C	YPL277C	Q08989	487 aa		6.18	□□□□□ -1.42
YNL171C	YNL171C	YJL045W	P47052	634 aa		6.17	□□□□□ -1.42
YNL171C	YNL171C	SOD2	P00447	233 aa		6.16	□□□□□ -1.42
YNL171C	YNL171C	MDL2	P33311	773 aa		6.16	□□□□□ -1.42
YNL171C	YNL171C	PET112	P33893	541 aa		6.16	□□□□□ -1.42
YNL171C	YNL171C	PEX28	P38848	579 aa		6.16	□□□□□ -1.42
YNL171C	YNL171C	AIM26	P32858	118 aa		6.15	□□□□□ -1.42
YNL171C	YNL171C	PIC2	P40035	300 aa		6.15	□□□□□ -1.42
YNL171C	YNL171C	RPS13	P05756	151 aa	Known RBP	6.14	□□□□□ -1.43
YNL171C	YNL171C	HSE1	P38753	452 aa		6.14	□□□□□ -1.43
YNL171C	YNL171C	MAD1	P40957	749 aa		6.14	□□□□□ -1.43
YNL171C	YNL171C	HRK1	Q08732	759 aa	Known RBP	6.14	□□□□□ -1.43
YNL171C	YNL171C	MNR2	P35724	969 aa		6.13	□□□□□ -1.43
YNL171C	YNL171C	QNS1	P38795	714 aa	Known RBP	6.13	□□□□□ -1.43
YNL171C	YNL171C	FOL2	P51601	243 aa	Known RBP	6.13	□□□□□ -1.43
YNL171C	YNL171C	YGL140C	P53120	1219 aa		6.13	□□□□□ -1.43
YNL171C	YNL171C	LAP2	Q10740	671 aa		6.13	□□□□□ -1.43
YNL171C	YNL171C	HEM13	P11353	328 aa	Known RBP	6.12	□□□□□ -1.43
YNL171C	YNL171C	CLN2	P20438	545 aa		6.12	□□□□□ -1.43
YNL171C	YNL171C	SNO2	P53823	222 aa		6.12	□□□□□ -1.43
YNL171C	YNL171C	VMA4	P22203	233 aa	Known RBP	6.11	□□□□□ -1.43
YNL171C	YNL171C	SRO9	P25567	434 aa	Known RBP	6.11	□□□□□ -1.43
YNL171C	YNL171C	MRL1	Q06815	381 aa		6.11	□□□□□ -1.43
YNL171C	YNL171C	RCL1	Q08096	367 aa	Predicted RBP	6.11	□□□□□ -1.43
YNL171C	YNL171C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
YNL171C	YNL171C	GCR1	P07261	785 aa		6.1	□□□□□ -1.43
YNL171C	YNL171C	SEC23	P15303	768 aa	Known RBP	6.1	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 110.9 ms