RNA–Protein interactions for RNA: YNL167C

SKO1, Transcript of Basic leucine zipper transcription factor of the ATF/CREB family, yeast

Gene SKO1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKO1	YNL167C	PIC2	P40035	300 aa		4.68	□□□□□ -1.66
SKO1	YNL167C	RKM2	Q03942	479 aa		4.68	□□□□□ -1.66
SKO1	YNL167C	NFS1	P25374	497 aa		4.68	□□□□□ -1.66
SKO1	YNL167C	WHI3	P34761	661 aa	Known RBP	4.68	□□□□□ -1.66
SKO1	YNL167C	FYV10	P40492	516 aa		4.68	□□□□□ -1.66
SKO1	YNL167C	LAP2	Q10740	671 aa		4.68	□□□□□ -1.66
SKO1	YNL167C	NSI1	Q12457	570 aa		4.68	□□□□□ -1.66
SKO1	YNL167C	MCM2	P29469	868 aa		4.67	□□□□□ -1.66
SKO1	YNL167C	RMD1	Q03441	430 aa		4.67	□□□□□ -1.66
SKO1	YNL167C	ESF1	Q06344	628 aa	Known RBP	4.67	□□□□□ -1.66
SKO1	YNL167C	HEM13	P11353	328 aa	Known RBP	4.66	□□□□□ -1.66
SKO1	YNL167C	SEC8	P32855	1065 aa		4.66	□□□□□ -1.66
SKO1	YNL167C	ADD66	P36040	267 aa		4.66	□□□□□ -1.66
SKO1	YNL167C	SPR28	Q04921	423 aa		4.66	□□□□□ -1.66
SKO1	YNL167C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	RIP-Chip
SKO1	YNL167C	RCM1	P53972	490 aa		4.66	□□□□□ -1.66
SKO1	YNL167C	LIP5	P32875	414 aa		4.65	□□□□□ -1.67
SKO1	YNL167C	ENT3	P47160	408 aa		4.65	□□□□□ -1.67
SKO1	YNL167C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
SKO1	YNL167C	EST2	Q06163	884 aa		4.65	□□□□□ -1.67
SKO1	YNL167C	HRK1	Q08732	759 aa	Known RBP	4.65	□□□□□ -1.67
SKO1	YNL167C	RET1	P22276	1149 aa	Known RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	OYE3	P41816	400 aa	Predicted RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	VPS53	P47061	822 aa		4.64	□□□□□ -1.67
SKO1	YNL167C	EAR1	Q03212	550 aa		4.64	□□□□□ -1.67
SKO1	YNL167C	OYE2	Q03558	400 aa	Known RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	RSA3	Q05942	220 aa	Known RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	MAG2	Q06436	670 aa	Known RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	BRE4	Q07660	1125 aa		4.64	□□□□□ -1.67
SKO1	YNL167C	PUS7	Q08647	676 aa	Known RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	GLT1	Q12680	2145 aa	Known RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	YNR063W	P53749	607 aa		4.64	□□□□□ -1.67
SKO1	YNL167C	TPP1	Q03796	238 aa		4.64	□□□□□ -1.67
SKO1	YNL167C	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
SKO1	YNL167C	HDA2	Q06629	674 aa		4.64	□□□□□ -1.67
SKO1	YNL167C	YVC1	Q12324	675 aa		4.64	□□□□□ -1.67
SKO1	YNL167C	GCD1	P09032	578 aa	Predicted RBP	4.63	□□□□□ -1.67
SKO1	YNL167C	CTH1	P47976	325 aa		4.63	□□□□□ -1.67
SKO1	YNL167C	SIW14	P53965	281 aa		4.63	□□□□□ -1.67
SKO1	YNL167C	PEP7	P32609	515 aa		4.62	□□□□□ -1.67
SKO1	YNL167C	QNS1	P38795	714 aa	Known RBP	4.62	□□□□□ -1.67
SKO1	YNL167C	GNP1	P48813	663 aa		4.62	□□□□□ -1.67
SKO1	YNL167C	MRL1	Q06815	381 aa		4.62	□□□□□ -1.67
SKO1	YNL167C	SDH1	Q00711	640 aa		4.61	□□□□□ -1.67
SKO1	YNL167C	TRE1	Q08919	783 aa		4.61	□□□□□ -1.67
SKO1	YNL167C	DED1	P06634	604 aa	Known RBP	4.6	□□□□□ -1.67
SKO1	YNL167C	AFG2	P32794	780 aa		4.6	□□□□□ -1.67
SKO1	YNL167C	GCR1	P07261	785 aa		4.6	□□□□□ -1.67
SKO1	YNL167C	HXT13	P39924	564 aa		4.6	□□□□□ -1.67
SKO1	YNL167C	HXT17	P53631	564 aa		4.6	□□□□□ -1.67
SKO1	YNL167C	HXT15	P54854	567 aa		4.6	□□□□□ -1.67
SKO1	YNL167C	ROD1	Q02805	837 aa		4.6	□□□□□ -1.67
SKO1	YNL167C	PTC5	Q12511	572 aa		4.6	□□□□□ -1.67
SKO1	YNL167C	ADP1	P25371	1049 aa		4.59	□□□□□ -1.67
SKO1	YNL167C	ALG3	P38179	458 aa		4.59	□□□□□ -1.67
SKO1	YNL167C	YHL012W	P38709	493 aa		4.59	□□□□□ -1.67
SKO1	YNL167C	PEX7	P39108	375 aa		4.59	□□□□□ -1.67
SKO1	YNL167C	YJL045W	P47052	634 aa		4.59	□□□□□ -1.67
SKO1	YNL167C	RTT10	Q08924	1013 aa		4.59	□□□□□ -1.67
SKO1	YNL167C	MKK2	P32491	506 aa		4.58	□□□□□ -1.68
SKO1	YNL167C	PET112	P33893	541 aa		4.58	□□□□□ -1.68
SKO1	YNL167C	NMD3	P38861	518 aa	Known RBP	4.58	□□□□□ -1.68
SKO1	YNL167C	PRO1	P32264	428 aa		4.58	□□□□□ -1.68
SKO1	YNL167C	SEA4	P38164	1038 aa		4.58	□□□□□ -1.68
SKO1	YNL167C	RAT1	Q02792	1006 aa	Known RBP	4.58	□□□□□ -1.68
SKO1	YNL167C	SAM35	P14693	329 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	NAP1	P25293	417 aa	Known RBP	4.57	□□□□□ -1.68
SKO1	YNL167C	RAD27	P26793	382 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	MDL2	P33311	773 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	MNR2	P35724	969 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	ORC3	P54790	616 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	SSY1	Q03770	852 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	SVF1	Q05515	481 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	YPL260W	Q08977	551 aa		4.57	□□□□□ -1.68
SKO1	YNL167C	TMA46	Q12000	345 aa	Known RBP	4.57	□□□□□ -1.68
SKO1	YNL167C	SRO9	P25567	434 aa	Known RBP	4.56	□□□□□ -1.68
SKO1	YNL167C	SYP1	P25623	870 aa	Known RBP	4.56	□□□□□ -1.68
SKO1	YNL167C	KIP1	P28742	1111 aa		4.56	□□□□□ -1.68
SKO1	YNL167C	YSC84	P32793	468 aa		4.56	□□□□□ -1.68
SKO1	YNL167C	RGD1	P38339	666 aa		4.56	□□□□□ -1.68
SKO1	YNL167C	PTC7	P38797	343 aa		4.56	□□□□□ -1.68
SKO1	YNL167C	CNN1	P43618	361 aa		4.56	□□□□□ -1.68
SKO1	YNL167C	COQ4	O13525	335 aa		4.55	□□□□□ -1.68
SKO1	YNL167C	CDC34	P14682	295 aa		4.55	□□□□□ -1.68
SKO1	YNL167C	DBP5	P20449	482 aa	Known RBP	4.55	□□□□□ -1.68
SKO1	YNL167C	HSP78	P33416	811 aa		4.55	□□□□□ -1.68
SKO1	YNL167C	RPN3	P40016	523 aa	Known RBP	4.55	□□□□□ -1.68
SKO1	YNL167C	SNU71	P53207	620 aa	Known RBP	4.55	□□□□□ -1.68
SKO1	YNL167C	MET10	P39692	1035 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	LPX1	Q12405	387 aa	Known RBP	4.54	□□□□□ -1.68
SKO1	YNL167C	SPO21	Q12411	609 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	DUT1	P33317	147 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	RER2	P35196	286 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	POL12	P38121	705 aa	Predicted RBP	4.54	□□□□□ -1.68
SKO1	YNL167C	CCZ1	P38273	704 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	GPB2	P39717	880 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	GTS1	P40956	396 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	ECL1	P48235	211 aa		4.54	□□□□□ -1.68
SKO1	YNL167C	HOS3	Q02959	697 aa	Known RBP	4.54	□□□□□ -1.68
SKO1	YNL167C	NBA1	Q08229	501 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms