RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	BMS1	Q08965	1183 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	MCD1	Q12158	566 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	RRP36	Q12481	300 aa	Predicted RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	RKM4	Q12504	494 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	ARG8	P18544	423 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	ESS1	P22696	170 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	GUT1	P32190	709 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	RIB7	P33312	244 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	YBR071W	P38243	211 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	SRP72	P38688	640 aa	Known RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	PCL7	P40186	285 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	TFB2	Q02939	513 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	FAP7	Q12055	197 aa	Predicted RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	SMC6	Q12749	1114 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	APA1	P16550	321 aa	Known RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	KAR3	P17119	729 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	SPO16	P17122	198 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	NPR1	P22211	790 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	MSH3	P25336	1018 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	POL4	P25615	582 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	MRE11	P32829	692 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	CNS1	P33313	385 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	EAP1	P36041	632 aa	Known RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	LAM5	P43560	674 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	SAP155	P43612	1002 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	YJL055W	P47044	245 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	CCT8	P47079	568 aa	Known RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	SAM37	P50110	327 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	HST1	P53685	503 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	PMT7	Q06644	662 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	CSR1	Q06705	408 aa	Known RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	MDM36	Q06820	579 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	DBF20	P32328	564 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	PEX18	P38855	283 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	RET2	P43621	546 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	MNP1	P53163	194 aa	Predicted RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	YGR125W	P53273	1036 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	YMR018W	Q04364	514 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	GYP1	Q08484	637 aa		2.78	□□□□□ -1.96
TOP2	YNL088W	TSR3	Q12094	313 aa	Known RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	RRP6	Q12149	733 aa	Known RBP	2.78	□□□□□ -1.96
TOP2	YNL088W	HMG1	P12683	1054 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	PMS1	P14242	873 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	TFC4	P33339	1025 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	HSM3	P38348	480 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	KIC1	P38692	1080 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	BCD1	P38772	366 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	LRP1	P38801	184 aa	Known RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	SPC72	P39723	622 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	RIC1	P40395	1056 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	AGX1	P43567	385 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	IML2	P47031	731 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	YNL050C	P53952	270 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	SEC5	P89102	971 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	UME1	Q03010	460 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	YOL036W	Q08206	761 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	SMF3	Q12078	473 aa	Predicted RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	MMP1	Q12372	583 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	PHO4	P07270	312 aa	Known RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	RDS2	P19541	446 aa	Known RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	PLC1	P32383	869 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	EUG1	P32474	517 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	FYV8	P46949	817 aa	Known RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	YPP1	P46951	817 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	HOP2	P53187	214 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	SDA1	P53313	767 aa	Known RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	VPS30	Q02948	557 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	HEH2	Q03281	663 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	COG8	Q04632	607 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	YPR097W	Q06839	1073 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	PUN1	Q06991	263 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	THI73	Q07904	523 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	SDH5	Q08230	162 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	RRG1	Q12167	365 aa	Predicted RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	PHM7	Q12252	991 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	TRP5	P00931	707 aa	Known RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	REC107	P21651	314 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	KIP2	P28743	706 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	ORC2	P32833	620 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	EDS1	P38073	919 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	SPF1	P39986	1215 aa	Known RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	CNN1	P43618	361 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	YML6	P51998	286 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	TAN1	P53072	289 aa	Predicted RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	ENT1	Q12518	454 aa		2.77	□□□□□ -1.97
TOP2	YNL088W	HSH49	Q99181	213 aa	Predicted RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	SSK22	P25390	1331 aa	Predicted RBP	2.77	□□□□□ -1.97
TOP2	YNL088W	SCJ1	P25303	377 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	YJU3	P28321	313 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	DEP1	P31385	405 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.76	□□□□□ -1.97	not detected
TOP2	YNL088W	PSY2	P40164	858 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	SDS3	P40505	327 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	PXA1	P41909	870 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	FAA4	P47912	694 aa	Known RBP	2.76	□□□□□ -1.97
TOP2	YNL088W	YGR122W	P53272	402 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	HST2	P53686	357 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	YLR287C	Q05881	355 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	MCP2	Q06567	569 aa		2.76	□□□□□ -1.97
TOP2	YNL088W	TRE2	Q08693	809 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms