RNA–Protein interactions for RNA: YNL026W

SAM50, Transcript of Component of the Sorting and Assembly Machinery (SAM) complex, yeastyeast

Gene SAM50, Length 1,455 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM50YNL026W REG2P38232 338 aa9.72□□□□□ -0.85
SAM50YNL026W STM1P39015 273 aaKnown RBP9.72□□□□□ -0.85
SAM50YNL026W SUE1Q06524 206 aa9.72□□□□□ -0.85
SAM50YNL026W JHD1P40034 492 aa9.71□□□□□ -0.86
SAM50YNL026W RPL8BP29453 256 aaKnown RBP9.7□□□□□ -0.86
SAM50YNL026W PRS1P32895 427 aaKnown RBP9.7□□□□□ -0.86
SAM50YNL026W RFC1P38630 861 aaKnown RBP9.7□□□□□ -0.86
SAM50YNL026W RSC8P43609 557 aaKnown RBP9.7□□□□□ -0.86
SAM50YNL026W PHR1P05066 565 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
SAM50YNL026W FLR1P38124 548 aa9.69□□□□□ -0.86
SAM50YNL026W HDA1P53973 706 aa9.69□□□□□ -0.86
SAM50YNL026W RPT6Q01939 405 aaKnown RBP9.69□□□□□ -0.86
SAM50YNL026W VPS72Q03388 795 aa9.69□□□□□ -0.86
SAM50YNL026W MCM6P53091 1017 aaKnown RBP9.68□□□□□ -0.86
SAM50YNL026W SSF2Q12153 453 aaPredicted RBP9.68□□□□□ -0.86
SAM50YNL026W CLF1Q12309 687 aaPredicted RBP9.68□□□□□ -0.86
SAM50YNL026W RKM4Q12504 494 aa9.68□□□□□ -0.86
SAM50YNL026W ECM29P38737 1868 aa9.68□□□□□ -0.86
SAM50YNL026W TY1B-AO13527 1196 aaKnown RBP9.67□□□□□ -0.86
SAM50YNL026W SGM1P47166 707 aa9.67□□□□□ -0.86
SAM50YNL026W LIF1P53150 421 aa9.67□□□□□ -0.86
SAM50YNL026W LSB1P53281 241 aa9.67□□□□□ -0.86
SAM50YNL026W MAS2P11914 482 aa9.66□□□□□ -0.86
SAM50YNL026W SNA3P14359 133 aa9.66□□□□□ -0.86
SAM50YNL026W SRP54P20424 541 aaKnown RBP9.66□□□□□ -0.86
SAM50YNL026W DUR3P33413 735 aa9.66□□□□□ -0.86
SAM50YNL026W POA1P38218 177 aa9.66□□□□□ -0.86
SAM50YNL026W NDT80P38830 627 aa9.66□□□□□ -0.86
SAM50YNL026W CTR1P49573 406 aa9.66□□□□□ -0.86
SAM50YNL026W AZR1P50080 613 aa9.66□□□□□ -0.86
SAM50YNL026W FMS1P50264 508 aa9.66□□□□□ -0.86
SAM50YNL026W YNL115CP53925 644 aa9.66□□□□□ -0.86
SAM50YNL026W MYO5Q04439 1219 aaKnown RBP9.66□□□□□ -0.86
SAM50YNL026W RPL17AP05740 184 aaKnown RBP9.66□□□□□ -0.86
SAM50YNL026W CAD1P24813 409 aaKnown RBP9.66□□□□□ -0.86
SAM50YNL026W SKI2P35207 1287 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
SAM50YNL026W BRL1P38770 471 aa9.66□□□□□ -0.86
SAM50YNL026W RPL17BP46990 184 aaKnown RBP9.66□□□□□ -0.86
SAM50YNL026W MSC2Q03455 724 aa9.66□□□□□ -0.86
SAM50YNL026W YLR326WQ06170 240 aaKnown RBP9.66□□□□□ -0.86
SAM50YNL026W CRG1P38892 291 aaRIP-Chip data9.65□□□□□ -0.87not detected
SAM50YNL026W PTA1Q01329 785 aaPredicted RBP9.65□□□□□ -0.87
SAM50YNL026W MAK31P23059 88 aa9.64□□□□□ -0.87
SAM50YNL026W RER2P35196 286 aa9.64□□□□□ -0.87
SAM50YNL026W RPS7BP48164 190 aaKnown RBP9.64□□□□□ -0.87
SAM50YNL026W ESF1Q06344 628 aaKnown RBP9.64□□□□□ -0.87
SAM50YNL026W SPN1Q06505 410 aaPredicted RBP9.64□□□□□ -0.87
SAM50YNL026W RIM20Q12033 661 aa9.64□□□□□ -0.87
SAM50YNL026W ATG11Q12527 1178 aa9.64□□□□□ -0.87
SAM50YNL026W CSM2P40465 213 aa9.63□□□□□ -0.87
SAM50YNL026W NKP2Q06162 153 aa9.63□□□□□ -0.87
SAM50YNL026W UGA4P32837 571 aa9.62□□□□□ -0.87
SAM50YNL026W GUA1P38625 525 aaKnown RBP9.62□□□□□ -0.87
SAM50YNL026W ALD5P40047 520 aaKnown RBP9.62□□□□□ -0.87
SAM50YNL026W YNR014WP53719 212 aa9.62□□□□□ -0.87
SAM50YNL026W MDM1Q01846 1127 aa9.62□□□□□ -0.87
SAM50YNL026W TOR2P32600 2474 aaKnown RBP9.62□□□□□ -0.87
SAM50YNL026W SEC20P28791 383 aa9.61□□□□□ -0.87
SAM50YNL026W TVP23P38962 199 aa9.61□□□□□ -0.87
SAM50YNL026W ECM16Q04217 1267 aaKnown RBP9.61□□□□□ -0.87
SAM50YNL026W YML020WQ03722 664 aa9.6□□□□□ -0.87
SAM50YNL026W TFC6Q06339 672 aa9.6□□□□□ -0.87
SAM50YNL026W DSE3Q08729 430 aa9.6□□□□□ -0.87
SAM50YNL026W SWI6P09959 803 aa9.59□□□□□ -0.87
SAM50YNL026W AAP1P37898 856 aaKnown RBP9.59□□□□□ -0.87
SAM50YNL026W INP51P40559 946 aaKnown RBP9.59□□□□□ -0.87
SAM50YNL026W RPL8AP17076 256 aaKnown RBP9.59□□□□□ -0.87
SAM50YNL026W AFT1P22149 690 aa9.59□□□□□ -0.87
SAM50YNL026W KIN82P25341 720 aa9.59□□□□□ -0.87
SAM50YNL026W UBP15P50101 1230 aa9.59□□□□□ -0.87
SAM50YNL026W DAP1Q12091 152 aa9.59□□□□□ -0.87
SAM50YNL026W YLL058WQ12198 575 aa9.59□□□□□ -0.87
SAM50YNL026W ALG2P43636 503 aa9.58□□□□□ -0.88
SAM50YNL026W SPO74P45819 413 aa9.58□□□□□ -0.88
SAM50YNL026W EMI2Q04409 500 aaKnown RBP9.58□□□□□ -0.88
SAM50YNL026W VIP1Q06685 1146 aaKnown RBP9.58□□□□□ -0.88
SAM50YNL026W HAA1Q12753 694 aaKnown RBP9.58□□□□□ -0.88
SAM50YNL026W PWP2P25635 923 aaKnown RBP9.57□□□□□ -0.88
SAM50YNL026W PAN5P38787 379 aa9.57□□□□□ -0.88
SAM50YNL026W TPM2P40414 161 aa9.57□□□□□ -0.88
SAM50YNL026W YGR035CP53222 116 aa9.57□□□□□ -0.88
SAM50YNL026W VAS1P07806 1104 aaKnown RBP9.56□□□□□ -0.88
SAM50YNL026W IMP2'P32351 346 aa9.56□□□□□ -0.88
SAM50YNL026W TFC8Q12308 588 aa9.56□□□□□ -0.88
SAM50YNL026W YOR111WQ99210 232 aa9.56□□□□□ -0.88
SAM50YNL026W SIS2P36024 562 aa9.55□□□□□ -0.88
SAM50YNL026W HMF1P40037 129 aaKnown RBP9.55□□□□□ -0.88
SAM50YNL026W FPR4Q06205 392 aaPredicted RBP9.55□□□□□ -0.88
SAM50YNL026W IDI1P15496 288 aa9.54□□□□□ -0.88
SAM50YNL026W FUB1P25659 250 aa9.54□□□□□ -0.88
SAM50YNL026W YCK3P39962 524 aa9.54□□□□□ -0.88
SAM50YNL026W FMP10P40098 244 aa9.54□□□□□ -0.88
SAM50YNL026W ASE1P50275 885 aa9.54□□□□□ -0.88
SAM50YNL026W EST2Q06163 884 aa9.54□□□□□ -0.88
SAM50YNL026W SPT2P06843 333 aaPredicted RBP9.53□□□□□ -0.88
SAM50YNL026W RME1P32338 300 aaKnown RBP9.53□□□□□ -0.88
SAM50YNL026W TVP38P36164 337 aa9.53□□□□□ -0.88
SAM50YNL026W CIC1P38779 376 aaKnown RBP9.53□□□□□ -0.88
SAM50YNL026W WHI4Q07655 649 aaKnown RBP9.53□□□□□ -0.88
SAM50YNL026W ARP6Q12509 438 aa9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms