RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W YGL138CP53122 345 aa10.74□□□□□ -0.69
LIP1YMR298W TRM44Q02648 567 aaKnown RBP10.74□□□□□ -0.69
LIP1YMR298W VPS30Q02948 557 aa10.74□□□□□ -0.69
LIP1YMR298W CSC1Q06538 782 aa10.74□□□□□ -0.69
LIP1YMR298W YDL124WQ07551 312 aaKnown RBP10.74□□□□□ -0.69
LIP1YMR298W DSE3Q08729 430 aa10.74□□□□□ -0.69
LIP1YMR298W KIN1P13185 1064 aa10.73□□□□□ -0.69
LIP1YMR298W ATE1P16639 503 aa10.73□□□□□ -0.69
LIP1YMR298W MCM3P24279 971 aaKnown RBP10.73□□□□□ -0.69
LIP1YMR298W URA1P28272 314 aaPredicted RBP10.73□□□□□ -0.69
LIP1YMR298W CUE3P53137 624 aaKnown RBP10.73□□□□□ -0.69
LIP1YMR298W SNU71P53207 620 aaKnown RBP10.73□□□□□ -0.69
LIP1YMR298W YNL035CP53962 389 aaKnown RBP10.73□□□□□ -0.69
LIP1YMR298W HTA1P04911 132 aaKnown RBP10.72□□□□□ -0.69
LIP1YMR298W HTA2P04912 132 aa10.72□□□□□ -0.69
LIP1YMR298W NUC1P08466 329 aa10.72□□□□□ -0.69
LIP1YMR298W SRP54P20424 541 aaKnown RBP10.72□□□□□ -0.69
LIP1YMR298W ACE2P21192 770 aa10.72□□□□□ -0.69
LIP1YMR298W COQ8P27697 501 aa10.72□□□□□ -0.69
LIP1YMR298W CHS3P29465 1165 aa10.72□□□□□ -0.69
LIP1YMR298W GLC3P32775 704 aa10.72□□□□□ -0.69
LIP1YMR298W STV1P37296 890 aa10.72□□□□□ -0.69
LIP1YMR298W YBL028CP38202 106 aa10.72□□□□□ -0.69
LIP1YMR298W CST26P38226 397 aa10.72□□□□□ -0.69
LIP1YMR298W RTC4P53850 401 aa10.72□□□□□ -0.69
LIP1YMR298W MDM1Q01846 1127 aa10.72□□□□□ -0.69
LIP1YMR298W TIP41Q12199 356 aa10.72□□□□□ -0.69
LIP1YMR298W PMA1P05030 918 aaKnown RBP10.71□□□□□ -0.69
LIP1YMR298W STI1P15705 589 aaKnown RBP RIP-Chip data10.71□□□□□ -0.69not detected
LIP1YMR298W MCM4P30665 933 aaKnown RBP10.71□□□□□ -0.69
LIP1YMR298W MPE1P35728 441 aaKnown RBP10.71□□□□□ -0.69
LIP1YMR298W CCT3P39077 534 aaKnown RBP10.71□□□□□ -0.69
LIP1YMR298W VPS4P52917 437 aa10.71□□□□□ -0.69
LIP1YMR298W SQS1P53866 767 aaKnown RBP10.71□□□□□ -0.69
LIP1YMR298W TIM50Q02776 476 aa10.71□□□□□ -0.69
LIP1YMR298W VMS1Q04311 632 aaKnown RBP10.71□□□□□ -0.69
LIP1YMR298W TUS1Q06412 1307 aa10.71□□□□□ -0.69
LIP1YMR298W YOR296WQ08748 1289 aa10.71□□□□□ -0.69
LIP1YMR298W ALG1P16661 449 aa10.7□□□□□ -0.7
LIP1YMR298W RAD53P22216 821 aa10.7□□□□□ -0.7
LIP1YMR298W SEC20P28791 383 aa10.7□□□□□ -0.7
LIP1YMR298W BMH1P29311 267 aaKnown RBP10.7□□□□□ -0.7
LIP1YMR298W EBP2P36049 427 aaKnown RBP10.7□□□□□ -0.7
LIP1YMR298W YGR117CP53270 476 aa10.7□□□□□ -0.7
LIP1YMR298W GIS4Q04233 774 aa10.7□□□□□ -0.7
LIP1YMR298W EIS1Q05050 843 aaKnown RBP10.7□□□□□ -0.7
LIP1YMR298W MMR1Q06324 491 aa10.7□□□□□ -0.7
LIP1YMR298W NCR1Q12200 1170 aa10.7□□□□□ -0.7
LIP1YMR298W PTC5Q12511 572 aa10.7□□□□□ -0.7
LIP1YMR298W GSY2P27472 705 aa10.69□□□□□ -0.7
LIP1YMR298W PTC3P34221 468 aaKnown RBP10.69□□□□□ -0.7
LIP1YMR298W VPS45P38932 577 aa10.69□□□□□ -0.7
LIP1YMR298W SSL2Q00578 843 aa10.69□□□□□ -0.7
LIP1YMR298W MYO1P08964 1928 aa10.68□□□□□ -0.7
LIP1YMR298W THR4P16120 514 aaKnown RBP10.68□□□□□ -0.7
LIP1YMR298W HPR1P17629 752 aaKnown RBP10.68□□□□□ -0.7
LIP1YMR298W SPB4P25808 606 aaPredicted RBP10.68□□□□□ -0.7
LIP1YMR298W MCM2P29469 868 aa10.68□□□□□ -0.7
LIP1YMR298W SAS3P34218 831 aa10.68□□□□□ -0.7
LIP1YMR298W SLI15P38283 698 aa10.68□□□□□ -0.7
LIP1YMR298W TPM2P40414 161 aa10.68□□□□□ -0.7
LIP1YMR298W FET4P40988 552 aa10.68□□□□□ -0.7
LIP1YMR298W RET3P53600 189 aa10.68□□□□□ -0.7
LIP1YMR298W GAP1P19145 602 aaPredicted RBP10.67□□□□□ -0.7
LIP1YMR298W SRP40P32583 406 aaPredicted RBP10.67□□□□□ -0.7
LIP1YMR298W TFG2P41896 400 aaPredicted RBP10.67□□□□□ -0.7
LIP1YMR298W BMT6Q12291 365 aa10.67□□□□□ -0.7
LIP1YMR298W SEC61P32915 480 aa10.66□□□□□ -0.7
LIP1YMR298W KEL1P38853 1164 aaKnown RBP10.66□□□□□ -0.7
LIP1YMR298W STT3P39007 718 aaKnown RBP10.66□□□□□ -0.7
LIP1YMR298W NOC2P39744 710 aaKnown RBP10.66□□□□□ -0.7
LIP1YMR298W NIT1P40447 199 aa10.66□□□□□ -0.7
LIP1YMR298W FYV10P40492 516 aa10.66□□□□□ -0.7
LIP1YMR298W DAK2P43550 591 aa10.66□□□□□ -0.7
LIP1YMR298W LSB1P53281 241 aa10.66□□□□□ -0.7
LIP1YMR298W SMD2Q06217 110 aaKnown RBP10.66□□□□□ -0.7
LIP1YMR298W VIP1Q06685 1146 aaKnown RBP10.66□□□□□ -0.7
LIP1YMR298W HIS4P00815 799 aaKnown RBP10.65□□□□□ -0.7
LIP1YMR298W TUB2P02557 457 aaKnown RBP10.65□□□□□ -0.7
LIP1YMR298W CBP1P07252 654 aa10.65□□□□□ -0.7
LIP1YMR298W SES1P07284 462 aaKnown RBP10.65□□□□□ -0.7
LIP1YMR298W SAM2P19358 384 aaKnown RBP10.65□□□□□ -0.7
LIP1YMR298W SAC6P32599 642 aaKnown RBP10.65□□□□□ -0.7
LIP1YMR298W ATH1P48016 1211 aa10.65□□□□□ -0.7
LIP1YMR298W BNI5P53890 448 aaKnown RBP10.65□□□□□ -0.7
LIP1YMR298W TRS120Q04183 1289 aa10.65□□□□□ -0.7
LIP1YMR298W LAP2Q10740 671 aa10.65□□□□□ -0.7
LIP1YMR298W RPL8AP17076 256 aaKnown RBP10.64□□□□□ -0.71
LIP1YMR298W YEL023CP39992 682 aa10.64□□□□□ -0.71
LIP1YMR298W LYS14P40971 790 aa10.64□□□□□ -0.71
LIP1YMR298W EMP47P43555 445 aa10.64□□□□□ -0.71
LIP1YMR298W ASE1P50275 885 aa10.64□□□□□ -0.71
LIP1YMR298W CSM3Q04659 317 aa10.64□□□□□ -0.71
LIP1YMR298W SLK19Q08581 821 aaKnown RBP10.64□□□□□ -0.71
LIP1YMR298W AIM7Q12156 149 aa10.64□□□□□ -0.71
LIP1YMR298W RTG2P32608 588 aaKnown RBP10.63□□□□□ -0.71
LIP1YMR298W TPS3P38426 1054 aaKnown RBP10.63□□□□□ -0.71
LIP1YMR298W TIF4631P39935 952 aaKnown RBP10.63□□□□□ -0.71
LIP1YMR298W DSE4P53753 1117 aa10.63□□□□□ -0.71
LIP1YMR298W JIP4Q03361 876 aa10.63□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms