RNA–Protein interactions for RNA: YMR276W

DSK2, Transcript of Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, yeast

Gene DSK2, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSK2	YMR276W	RPL8A	P17076	256 aa	Known RBP	13.81	□□□□□ -0.2
DSK2	YMR276W	TKL1	P23254	680 aa	Known RBP	13.81	□□□□□ -0.2
DSK2	YMR276W	DBP1	P24784	617 aa	Known RBP	13.81	□□□□□ -0.2
DSK2	YMR276W	MCM4	P30665	933 aa	Known RBP	13.81	□□□□□ -0.2
DSK2	YMR276W	KSP1	P38691	1029 aa	Known RBP	13.81	□□□□□ -0.2
DSK2	YMR276W	MYO1	P08964	1928 aa		13.81	□□□□□ -0.2
DSK2	YMR276W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	13.8	□□□□□ -0.2	not detected
DSK2	YMR276W	YUR1	P26725	428 aa		13.8	□□□□□ -0.2
DSK2	YMR276W	AIM9	P40053	627 aa	Known RBP	13.8	□□□□□ -0.2
DSK2	YMR276W	TY1B-A	O13527	1196 aa	Known RBP	13.79	□□□□□ -0.2
DSK2	YMR276W	CIT1	P00890	479 aa		13.79	□□□□□ -0.2
DSK2	YMR276W	PWP2	P25635	923 aa	Known RBP	13.79	□□□□□ -0.2
DSK2	YMR276W	SEC8	P32855	1065 aa		13.79	□□□□□ -0.2
DSK2	YMR276W	TFC4	P33339	1025 aa		13.79	□□□□□ -0.2
DSK2	YMR276W	VID28	P40547	921 aa		13.79	□□□□□ -0.2
DSK2	YMR276W	YGL039W	P53183	348 aa	Known RBP	13.79	□□□□□ -0.2
DSK2	YMR276W	ISA1	Q07821	250 aa	Predicted RBP	13.79	□□□□□ -0.2
DSK2	YMR276W	DBP7	P36120	742 aa	Known RBP	13.78	□□□□□ -0.2
DSK2	YMR276W	REG2	P38232	338 aa		13.78	□□□□□ -0.2
DSK2	YMR276W	NOC2	P39744	710 aa	Known RBP	13.78	□□□□□ -0.2
DSK2	YMR276W	ECM23	Q02710	187 aa		13.78	□□□□□ -0.2
DSK2	YMR276W	YDR461C-A	Q2V2P7	80 aa		13.78	□□□□□ -0.2
DSK2	YMR276W	PDC1	P06169	563 aa	Known RBP	13.77	□□□□□ -0.21
DSK2	YMR276W	FBP26	P32604	452 aa		13.77	□□□□□ -0.21
DSK2	YMR276W	TIM23	P32897	222 aa		13.77	□□□□□ -0.21
DSK2	YMR276W	AKR1	P39010	764 aa		13.77	□□□□□ -0.21
DSK2	YMR276W	FIR1	P40020	876 aa		13.77	□□□□□ -0.21
DSK2	YMR276W	YPL034W	Q03083	165 aa		13.77	□□□□□ -0.21
DSK2	YMR276W	YMR321C	Q04898	105 aa		13.77	□□□□□ -0.21
DSK2	YMR276W	YDR341C	Q05506	607 aa	Known RBP	13.77	□□□□□ -0.21
DSK2	YMR276W	TRM11	Q12463	433 aa		13.77	□□□□□ -0.21
DSK2	YMR276W	POX1	P13711	748 aa		13.76	□□□□□ -0.21
DSK2	YMR276W	UGA4	P32837	571 aa		13.76	□□□□□ -0.21
DSK2	YMR276W	SKP2	P42843	763 aa		13.76	□□□□□ -0.21
DSK2	YMR276W	CLA4	P48562	842 aa		13.76	□□□□□ -0.21
DSK2	YMR276W	TRL1	P09880	827 aa	Known RBP	13.75	□□□□□ -0.21
DSK2	YMR276W	YFL040W	P43562	540 aa		13.75	□□□□□ -0.21
DSK2	YMR276W	ASE1	P50275	885 aa		13.75	□□□□□ -0.21
DSK2	YMR276W	SCS3	P53012	380 aa		13.75	□□□□□ -0.21
DSK2	YMR276W	ARP5	P53946	755 aa		13.75	□□□□□ -0.21
DSK2	YMR276W	PTA1	Q01329	785 aa	Predicted RBP	13.75	□□□□□ -0.21
DSK2	YMR276W	FMP30	Q02883	468 aa		13.75	□□□□□ -0.21
DSK2	YMR276W	WHI3	P34761	661 aa	Known RBP	13.74	□□□□□ -0.21
DSK2	YMR276W	GPT2	P36148	743 aa		13.74	□□□□□ -0.21
DSK2	YMR276W	PAN5	P38787	379 aa		13.74	□□□□□ -0.21
DSK2	YMR276W	CTR1	P49573	406 aa		13.74	□□□□□ -0.21
DSK2	YMR276W	MET6	P05694	767 aa	Known RBP	13.73	□□□□□ -0.21
DSK2	YMR276W	KTR2	P33550	425 aa		13.73	□□□□□ -0.21
DSK2	YMR276W	YKE2	P52553	114 aa		13.73	□□□□□ -0.21
DSK2	YMR276W	YLR326W	Q06170	240 aa	Known RBP	13.73	□□□□□ -0.21
DSK2	YMR276W	YPR117W	Q06116	2489 aa		13.73	□□□□□ -0.21
DSK2	YMR276W	SES1	P07284	462 aa	Known RBP	13.72	□□□□□ -0.21
DSK2	YMR276W	MATALPHA2	P0CY08	210 aa		13.72	□□□□□ -0.21
DSK2	YMR276W	HMLALPHA2	P0CY09	210 aa		13.72	□□□□□ -0.21
DSK2	YMR276W	CCT3	P39077	534 aa	Known RBP	13.72	□□□□□ -0.21
DSK2	YMR276W	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.71	□□□□□ -0.21	not detected
DSK2	YMR276W	BMH2	P34730	273 aa	Known RBP	13.71	□□□□□ -0.21
DSK2	YMR276W	RXT2	P38255	430 aa		13.71	□□□□□ -0.21
DSK2	YMR276W	OPY1	P38271	328 aa		13.71	□□□□□ -0.21
DSK2	YMR276W	EPL1	P43572	832 aa		13.71	□□□□□ -0.21
DSK2	YMR276W	DAK1	P54838	584 aa	Known RBP	13.71	□□□□□ -0.21
DSK2	YMR276W	MAK11	P20484	414 aa	Known RBP	13.7	□□□□□ -0.22
DSK2	YMR276W	SUL1	P38359	859 aa		13.7	□□□□□ -0.22
DSK2	YMR276W	UBP10	P53874	792 aa	Predicted RBP	13.7	□□□□□ -0.22
DSK2	YMR276W	GDE1	Q02979	1223 aa		13.7	□□□□□ -0.22
DSK2	YMR276W	OXR1	Q08952	273 aa		13.7	□□□□□ -0.22
DSK2	YMR276W	RTP1	Q12751	981 aa		13.7	□□□□□ -0.22
DSK2	YMR276W	HCA4	P20448	770 aa	Known RBP	13.69	□□□□□ -0.22
DSK2	YMR276W	PCI8	P40512	444 aa		13.69	□□□□□ -0.22
DSK2	YMR276W	TSR3	Q12094	313 aa	Known RBP	13.69	□□□□□ -0.22
DSK2	YMR276W	SWI4	P25302	1093 aa	Known RBP	13.68	□□□□□ -0.22
DSK2	YMR276W	ARP6	Q12509	438 aa		13.68	□□□□□ -0.22
DSK2	YMR276W	RNR2	P09938	399 aa	Known RBP	13.67	□□□□□ -0.22
DSK2	YMR276W	SAS3	P34218	831 aa		13.67	□□□□□ -0.22
DSK2	YMR276W	FLR1	P38124	548 aa		13.67	□□□□□ -0.22
DSK2	YMR276W	UBP15	P50101	1230 aa		13.67	□□□□□ -0.22
DSK2	YMR276W	MAS2	P11914	482 aa		13.66	□□□□□ -0.22
DSK2	YMR276W	MIP1	P15801	1254 aa		13.66	□□□□□ -0.22
DSK2	YMR276W	RPC31	P17890	251 aa		13.66	□□□□□ -0.22
DSK2	YMR276W	AVT3	P36062	692 aa		13.66	□□□□□ -0.22
DSK2	YMR276W	RPS7B	P48164	190 aa	Known RBP	13.66	□□□□□ -0.22
DSK2	YMR276W	HUL5	P53119	910 aa		13.66	□□□□□ -0.22
DSK2	YMR276W	YGL138C	P53122	345 aa		13.66	□□□□□ -0.22
DSK2	YMR276W	BNI5	P53890	448 aa	Known RBP	13.66	□□□□□ -0.22
DSK2	YMR276W	GIS4	Q04233	774 aa		13.66	□□□□□ -0.22
DSK2	YMR276W	SMD2	Q06217	110 aa	Known RBP	13.66	□□□□□ -0.22
DSK2	YMR276W	HEM1	P09950	548 aa	Predicted RBP	13.65	□□□□□ -0.22
DSK2	YMR276W	SNA3	P14359	133 aa		13.65	□□□□□ -0.22
DSK2	YMR276W	CLB5	P30283	435 aa		13.65	□□□□□ -0.22
DSK2	YMR276W	RPN10	P38886	268 aa	Known RBP	13.65	□□□□□ -0.22
DSK2	YMR276W	EAR1	Q03212	550 aa		13.65	□□□□□ -0.22
DSK2	YMR276W	OYE2	Q03558	400 aa	Known RBP	13.65	□□□□□ -0.22
DSK2	YMR276W	WHI4	Q07655	649 aa	Known RBP	13.65	□□□□□ -0.22
DSK2	YMR276W	YLL058W	Q12198	575 aa		13.65	□□□□□ -0.22
DSK2	YMR276W	SRO9	P25567	434 aa	Known RBP	13.64	□□□□□ -0.23
DSK2	YMR276W	ISW1	P38144	1129 aa		13.63	□□□□□ -0.23
DSK2	YMR276W	HMF1	P40037	129 aa	Known RBP	13.63	□□□□□ -0.23
DSK2	YMR276W	ORC4	P54791	529 aa		13.63	□□□□□ -0.23
DSK2	YMR276W	YLR407W	Q06070	228 aa		13.63	□□□□□ -0.23
DSK2	YMR276W	LDB19	Q12502	818 aa		13.63	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms