RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	YLR257W	Q06146	321 aa	Known RBP	4.62	□□□□□ -1.67
TIF11	YMR260C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
TIF11	YMR260C	DAK2	P43550	591 aa		4.61	□□□□□ -1.67
TIF11	YMR260C	YPL109C	Q02981	657 aa		4.61	□□□□□ -1.67
TIF11	YMR260C	RSA3	Q05942	220 aa	Known RBP	4.61	□□□□□ -1.67
TIF11	YMR260C	LAP2	Q10740	671 aa		4.61	□□□□□ -1.67
TIF11	YMR260C	SEC23	P15303	768 aa	Known RBP	4.6	□□□□□ -1.67
TIF11	YMR260C	RET1	P22276	1149 aa	Known RBP	4.6	□□□□□ -1.67
TIF11	YMR260C	SRO9	P25567	434 aa	Known RBP	4.6	□□□□□ -1.67
TIF11	YMR260C	UGA4	P32837	571 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	MDL2	P33311	773 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	SQT1	P35184	431 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	YHL012W	P38709	493 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	PTC7	P38797	343 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	RSM26	P47141	266 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	ADI1	Q03677	179 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	DAL4	Q04895	635 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	OXR1	Q08952	273 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	WHI5	Q12416	295 aa		4.6	□□□□□ -1.67
TIF11	YMR260C	TAF13	P11747	167 aa		4.59	□□□□□ -1.67
TIF11	YMR260C	PRP6	P19735	899 aa	Predicted RBP	4.59	□□□□□ -1.67
TIF11	YMR260C	SEC20	P28791	383 aa		4.59	□□□□□ -1.67
TIF11	YMR260C	PEX28	P38848	579 aa		4.59	□□□□□ -1.67
TIF11	YMR260C	YGL140C	P53120	1219 aa		4.59	□□□□□ -1.67
TIF11	YMR260C	PEX13	P80667	386 aa		4.59	□□□□□ -1.67
TIF11	YMR260C	HXK1	P04806	485 aa	Known RBP	4.58	□□□□□ -1.68
TIF11	YMR260C	YCR015C	P25616	317 aa		4.58	□□□□□ -1.68
TIF11	YMR260C	THI80	P35202	319 aa		4.58	□□□□□ -1.68
TIF11	YMR260C	VPS53	P47061	822 aa		4.58	□□□□□ -1.68
TIF11	YMR260C	TOS4	Q06266	489 aa		4.58	□□□□□ -1.68
TIF11	YMR260C	ADD66	P36040	267 aa		4.57	□□□□□ -1.68
TIF11	YMR260C	QNS1	P38795	714 aa	Known RBP	4.57	□□□□□ -1.68
TIF11	YMR260C	GTS1	P40956	396 aa		4.57	□□□□□ -1.68
TIF11	YMR260C	ENV11	P53246	860 aa		4.57	□□□□□ -1.68
TIF11	YMR260C	YDL177C	Q12257	170 aa		4.57	□□□□□ -1.68
TIF11	YMR260C	HEM13	P11353	328 aa	Known RBP	4.56	□□□□□ -1.68
TIF11	YMR260C	ATG14	P38270	344 aa		4.56	□□□□□ -1.68
TIF11	YMR260C	YJL045W	P47052	634 aa		4.56	□□□□□ -1.68
TIF11	YMR260C	ESC8	Q08119	714 aa		4.56	□□□□□ -1.68
TIF11	YMR260C	FAA3	P39002	694 aa		4.55	□□□□□ -1.68
TIF11	YMR260C	ENT3	P47160	408 aa		4.55	□□□□□ -1.68
TIF11	YMR260C	RIM8	P53179	542 aa		4.55	□□□□□ -1.68
TIF11	YMR260C	MRPL22	P53881	309 aa		4.55	□□□□□ -1.68
TIF11	YMR260C	YSC84	P32793	468 aa		4.54	□□□□□ -1.68
TIF11	YMR260C	AFG2	P32794	780 aa		4.54	□□□□□ -1.68
TIF11	YMR260C	FOL2	P51601	243 aa	Known RBP	4.54	□□□□□ -1.68
TIF11	YMR260C	SEN54	Q02825	467 aa	Predicted RBP	4.54	□□□□□ -1.68
TIF11	YMR260C	SOD2	P00447	233 aa		4.53	□□□□□ -1.68
TIF11	YMR260C	RPT1	P33299	467 aa	Known RBP	4.53	□□□□□ -1.68
TIF11	YMR260C	BAP2	P38084	609 aa		4.53	□□□□□ -1.68
TIF11	YMR260C	PIC2	P40035	300 aa		4.53	□□□□□ -1.68
TIF11	YMR260C	YGR122W	P53272	402 aa		4.53	□□□□□ -1.68
TIF11	YMR260C	EST2	Q06163	884 aa		4.53	□□□□□ -1.68
TIF11	YMR260C	RSC58	Q07979	502 aa		4.53	□□□□□ -1.68
TIF11	YMR260C	COQ4	O13525	335 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	YKL222C	P35995	705 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	AIM3	P38266	947 aa	Known RBP	4.52	□□□□□ -1.69
TIF11	YMR260C	NMD3	P38861	518 aa	Known RBP	4.52	□□□□□ -1.69
TIF11	YMR260C	RPN3	P40016	523 aa	Known RBP	4.52	□□□□□ -1.69
TIF11	YMR260C	THI12	P42883	340 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	THI5	P43534	340 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	THI11	P47183	340 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	SNO2	P53823	222 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	THI13	Q07748	340 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	NBA1	Q08229	501 aa	Known RBP	4.52	□□□□□ -1.69
TIF11	YMR260C	MCD1	Q12158	566 aa		4.52	□□□□□ -1.69
TIF11	YMR260C	FLR1	P38124	548 aa		4.51	□□□□□ -1.69
TIF11	YMR260C	CCZ1	P38273	704 aa		4.51	□□□□□ -1.69
TIF11	YMR260C	ETP1	P38748	585 aa	Known RBP	4.51	□□□□□ -1.69
TIF11	YMR260C	YNR063W	P53749	607 aa		4.51	□□□□□ -1.69
TIF11	YMR260C	YPL260W	Q08977	551 aa		4.51	□□□□□ -1.69
TIF11	YMR260C	PRE9	P23638	258 aa	Known RBP	4.5	□□□□□ -1.69
TIF11	YMR260C	KIP1	P28742	1111 aa		4.5	□□□□□ -1.69
TIF11	YMR260C	AIM26	P32858	118 aa		4.5	□□□□□ -1.69
TIF11	YMR260C	IPL1	P38991	367 aa		4.5	□□□□□ -1.69
TIF11	YMR260C	TAF1	P46677	1066 aa		4.5	□□□□□ -1.69
TIF11	YMR260C	SIW14	P53965	281 aa		4.5	□□□□□ -1.69
TIF11	YMR260C	HDA2	Q06629	674 aa		4.5	□□□□□ -1.69
TIF11	YMR260C	PTC5	Q12511	572 aa		4.5	□□□□□ -1.69
TIF11	YMR260C	PIK1	P39104	1066 aa		4.49	□□□□□ -1.69
TIF11	YMR260C	GIP4	P39732	760 aa		4.49	□□□□□ -1.69
TIF11	YMR260C	MRPS18	P42847	217 aa		4.49	□□□□□ -1.69
TIF11	YMR260C	GNP1	P48813	663 aa		4.49	□□□□□ -1.69
TIF11	YMR260C	TNA1	P53322	534 aa		4.49	□□□□□ -1.69
TIF11	YMR260C	YDR132C	Q03900	495 aa		4.49	□□□□□ -1.69
TIF11	YMR260C	SPS1	P08458	490 aa		4.48	□□□□□ -1.69
TIF11	YMR260C	SNF5	P18480	905 aa		4.48	□□□□□ -1.69
TIF11	YMR260C	ALG3	P38179	458 aa		4.48	□□□□□ -1.69
TIF11	YMR260C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	RIP-Chip
TIF11	YMR260C	HOS3	Q02959	697 aa	Known RBP	4.48	□□□□□ -1.69
TIF11	YMR260C	RCL1	Q08096	367 aa	Predicted RBP	4.48	□□□□□ -1.69
TIF11	YMR260C	YPL277C	Q08989	487 aa		4.48	□□□□□ -1.69
TIF11	YMR260C	RPS13	P05756	151 aa	Known RBP	4.47	□□□□□ -1.69
TIF11	YMR260C	CYC8	P14922	966 aa		4.47	□□□□□ -1.69
TIF11	YMR260C	SLD2	P34252	453 aa		4.47	□□□□□ -1.69
TIF11	YMR260C	RAD2	P07276	1031 aa		4.46	□□□□□ -1.7
TIF11	YMR260C	RGD1	P38339	666 aa		4.46	□□□□□ -1.7
TIF11	YMR260C	HXT13	P39924	564 aa		4.46	□□□□□ -1.7
TIF11	YMR260C	SEC26	P41810	973 aa	Known RBP	4.46	□□□□□ -1.7
TIF11	YMR260C	HNT2	P49775	206 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms