RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP5	YMR229C	CDC48	P25694	835 aa	Known RBP	3.6	□□□□□ -1.83
RRP5	YMR229C	PSE1	P32337	1089 aa	Known RBP	3.6	□□□□□ -1.83
RRP5	YMR229C	VHR2	P40041	505 aa		3.6	□□□□□ -1.83
RRP5	YMR229C	YMR147W	P40218	223 aa	Known RBP	3.6	□□□□□ -1.83
RRP5	YMR229C	DAS1	P47005	663 aa		3.6	□□□□□ -1.83
RRP5	YMR229C	YGL242C	P53066	181 aa		3.6	□□□□□ -1.83
RRP5	YMR229C	MDR1	P53258	950 aa		3.6	□□□□□ -1.83
RRP5	YMR229C	POL30	P15873	258 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	CST26	P38226	397 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	ESF2	P53743	316 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	YNL035C	P53962	389 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	NOG1	Q02892	647 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	SPO75	Q07798	868 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	HIF1	Q12373	385 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	TIF6	Q12522	245 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	RPS19A	P07280	144 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	RPS19B	P07281	144 aa	Predicted RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	SSA1	P10591	642 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	YEL043W	P32618	956 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	NPL4	P33755	580 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	OCT1	P35999	772 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	SHE3	P38272	425 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	TIF4631	P39935	952 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	BOI2	P39969	1040 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	PTA1	Q01329	785 aa	Predicted RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	PMA1	P05030	918 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	RPC19	P28000	142 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	MRF1	P30775	413 aa	Predicted RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	CBF2	P32504	956 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	CIN4	P39110	191 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	SPC72	P39723	622 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	MMF1	P40185	145 aa	Known RBP	3.59	□□□□□ -1.83
RRP5	YMR229C	TOF1	P53840	1238 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	GTR1	Q00582	310 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	SPO21	Q12411	609 aa		3.59	□□□□□ -1.83
RRP5	YMR229C	SNA3	P14359	133 aa		3.59	□□□□□ -1.84
RRP5	YMR229C	UBC1	P21734	215 aa	Known RBP	3.59	□□□□□ -1.84
RRP5	YMR229C	CLB4	P24871	460 aa		3.59	□□□□□ -1.84
RRP5	YMR229C	PER1	P25625	357 aa		3.59	□□□□□ -1.84
RRP5	YMR229C	SKG6	P32900	734 aa	Predicted RBP	3.59	□□□□□ -1.84
RRP5	YMR229C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.84	not detected
RRP5	YMR229C	MSC7	P38694	644 aa		3.59	□□□□□ -1.84
RRP5	YMR229C	PRP43	P53131	767 aa	Known RBP	3.59	□□□□□ -1.84
RRP5	YMR229C	NYV1	Q12255	253 aa		3.59	□□□□□ -1.84
RRP5	YMR229C	SSK22	P25390	1331 aa	Predicted RBP	3.59	□□□□□ -1.84
RRP5	YMR229C	DOP1	Q03921	1698 aa		3.59	□□□□□ -1.84
RRP5	YMR229C	FRD1	P32614	470 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	AAP1	P37898	856 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	MAK5	P38112	773 aa	Predicted RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	SPP381	P38282	291 aa	Predicted RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	RPN10	P38886	268 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	TPO2	P53283	614 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	SOL4	P53315	255 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	VAC14	Q06708	880 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	BRR1	Q99177	341 aa	Predicted RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	SEY1	Q99287	776 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	PGI1	P12709	554 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	UTP9	P38882	575 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	SAK1	P38990	1142 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	VTC2	P43585	828 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	VTC4	P47075	721 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	RRP46	P53256	223 aa	Predicted RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	TSR2	Q06672	205 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	YPL225W	Q08971	146 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	IES3	Q12345	250 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	PET111	P08468	800 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	HSC82	P15108	705 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	CNS1	P33313	385 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	PAM1	P37304	830 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	OCA5	P38738	679 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	TRS85	P46944	698 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	PSP2	P50109	593 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	SPN1	Q06505	410 aa	Predicted RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	AFT2	Q08957	416 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	APL1	P27351	700 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	CTM1	P38818	585 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	PSY2	P40164	858 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	GSM1	P42950	618 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	ADE16	P54113	591 aa	Known RBP	3.58	□□□□□ -1.84
RRP5	YMR229C	HFD1	Q04458	532 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	YDL073W	Q07454	984 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	YSP2	Q06681	1438 aa		3.58	□□□□□ -1.84
RRP5	YMR229C	YJU2	P28320	278 aa	Predicted RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	NPL6	P32832	435 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	SPT21	P35209	758 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	SPC42	P36094	363 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	GUA1	P38625	525 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	SHC1	P39000	512 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	INA22	P40576	216 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	HYR1	P40581	163 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	YJR107W	P47145	328 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	NAF1	P53919	492 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	MNL2	Q12205	849 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	YOR093C	Q12275	1648 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	CYB2	P00175	591 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	HIS4	P00815	799 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	LAM1	P38851	1228 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	RPN3	P40016	523 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	YFL040W	P43562	540 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms