RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W SEC8P32855 1065 aa17.62■□□□□ 0.41
SCJ1YMR214W MCR1P36060 302 aaKnown RBP17.62■□□□□ 0.41
SCJ1YMR214W SGM1P47166 707 aa17.62■□□□□ 0.41
SCJ1YMR214W COQ1P18900 473 aa17.61■□□□□ 0.41
SCJ1YMR214W OPI1P21957 404 aa17.6■□□□□ 0.41
SCJ1YMR214W TKL1P23254 680 aaKnown RBP17.6■□□□□ 0.41
SCJ1YMR214W REG2P38232 338 aa17.6■□□□□ 0.41
SCJ1YMR214W VPS45P38932 577 aa17.6■□□□□ 0.41
SCJ1YMR214W YNL115CP53925 644 aa17.59■□□□□ 0.41
SCJ1YMR214W TRL1P09880 827 aaKnown RBP17.58■□□□□ 0.4
SCJ1YMR214W SNA3P14359 133 aa17.58■□□□□ 0.4
SCJ1YMR214W VPS30Q02948 557 aa17.58■□□□□ 0.4
SCJ1YMR214W ESF1Q06344 628 aaKnown RBP17.58■□□□□ 0.4
SCJ1YMR214W FOL1P53848 824 aa17.57■□□□□ 0.4
SCJ1YMR214W YMR321CQ04898 105 aa17.56■□□□□ 0.4
SCJ1YMR214W UTP4Q06679 776 aaKnown RBP17.56■□□□□ 0.4
SCJ1YMR214W RLF2Q12495 606 aa17.56■□□□□ 0.4
SCJ1YMR214W DBP7P36120 742 aaKnown RBP17.55■□□□□ 0.4
SCJ1YMR214W AIM9P40053 627 aaKnown RBP17.55■□□□□ 0.4
SCJ1YMR214W PGA3Q12746 312 aaKnown RBP17.55■□□□□ 0.4
SCJ1YMR214W CHO2P05374 869 aaKnown RBP17.54■□□□□ 0.4
SCJ1YMR214W PRO3P32263 286 aaKnown RBP17.54■□□□□ 0.4
SCJ1YMR214W OPY1P38271 328 aa17.54■□□□□ 0.4
SCJ1YMR214W GUA1P38625 525 aaKnown RBP17.54■□□□□ 0.4
SCJ1YMR214W CIC1P38779 376 aaKnown RBP17.54■□□□□ 0.4
SCJ1YMR214W UFD2P54860 961 aa17.54■□□□□ 0.4
SCJ1YMR214W MAS2P11914 482 aa17.53■□□□□ 0.4
SCJ1YMR214W RIT1P23796 513 aa17.53■□□□□ 0.4
SCJ1YMR214W CAD1P24813 409 aaKnown RBP17.53■□□□□ 0.4
SCJ1YMR214W DUR3P33413 735 aa17.53■□□□□ 0.4
SCJ1YMR214W AZR1P50080 613 aa17.53■□□□□ 0.4
SCJ1YMR214W RPS15Q01855 142 aaKnown RBP17.53■□□□□ 0.4
SCJ1YMR214W MET1P36150 593 aa17.52■□□□□ 0.4
SCJ1YMR214W BRL1P38770 471 aa17.52■□□□□ 0.4
SCJ1YMR214W DAP1Q12091 152 aa17.52■□□□□ 0.4
SCJ1YMR214W FLR1P38124 548 aa17.51■□□□□ 0.39
SCJ1YMR214W LSB1P53281 241 aa17.51■□□□□ 0.39
SCJ1YMR214W PCT1P13259 424 aa17.5■□□□□ 0.39
SCJ1YMR214W RPL8BP29453 256 aaKnown RBP17.5■□□□□ 0.39
SCJ1YMR214W GUD1Q07729 489 aa17.5■□□□□ 0.39
SCJ1YMR214W SWI6P09959 803 aa17.49■□□□□ 0.39
SCJ1YMR214W TY1B-AO13527 1196 aaKnown RBP17.48■□□□□ 0.39
SCJ1YMR214W PHR1P05066 565 aaKnown RBP RIP-Chip data17.48■□□□□ 0.39not detected
SCJ1YMR214W SPT2P06843 333 aaPredicted RBP17.48■□□□□ 0.39
SCJ1YMR214W NUC1P08466 329 aa17.48■□□□□ 0.39
SCJ1YMR214W RNR2P09938 399 aaKnown RBP17.48■□□□□ 0.39
SCJ1YMR214W ALD5P40047 520 aaKnown RBP17.48■□□□□ 0.39
SCJ1YMR214W MSC2Q03455 724 aa17.48■□□□□ 0.39
SCJ1YMR214W TPM1P17536 199 aaKnown RBP17.47■□□□□ 0.39
SCJ1YMR214W SKI2P35207 1287 aaKnown RBP RIP-Chip data17.47■□□□□ 0.39not detected
SCJ1YMR214W KRI1P42846 591 aaKnown RBP17.47■□□□□ 0.39
SCJ1YMR214W SSF2Q12153 453 aaPredicted RBP17.47■□□□□ 0.39
SCJ1YMR214W MAP1Q01662 387 aaKnown RBP RIP-Chip data17.46■□□□□ 0.39not detected
SCJ1YMR214W SUE1Q06524 206 aa17.46■□□□□ 0.39
SCJ1YMR214W ATG11Q12527 1178 aa17.46■□□□□ 0.39
SCJ1YMR214W MYO1P08964 1928 aa17.46■□□□□ 0.39
SCJ1YMR214W IMP2'P32351 346 aa17.45■□□□□ 0.38
SCJ1YMR214W POA1P38218 177 aa17.45■□□□□ 0.38
SCJ1YMR214W LIF1P53150 421 aa17.45■□□□□ 0.38
SCJ1YMR214W YLL058WQ12198 575 aa17.45■□□□□ 0.38
SCJ1YMR214W IDI1P15496 288 aa17.44■□□□□ 0.38
SCJ1YMR214W PEP3P27801 918 aa17.44■□□□□ 0.38
SCJ1YMR214W RDH54P38086 958 aa17.44■□□□□ 0.38
SCJ1YMR214W INP51P40559 946 aaKnown RBP17.44■□□□□ 0.38
SCJ1YMR214W VID30P53076 958 aa17.44■□□□□ 0.38
SCJ1YMR214W ANP1P32629 500 aa17.43■□□□□ 0.38
SCJ1YMR214W SPO22P40511 975 aa17.43■□□□□ 0.38
SCJ1YMR214W SPO74P45819 413 aa17.43■□□□□ 0.38
SCJ1YMR214W TSR3Q12094 313 aaKnown RBP17.43■□□□□ 0.38
SCJ1YMR214W CLF1Q12309 687 aaPredicted RBP17.43■□□□□ 0.38
SCJ1YMR214W OYE3P41816 400 aaPredicted RBP17.42■□□□□ 0.38
SCJ1YMR214W RPS7BP48164 190 aaKnown RBP17.42■□□□□ 0.38
SCJ1YMR214W FMS1P50264 508 aa17.42■□□□□ 0.38
SCJ1YMR214W RPT6Q01939 405 aaKnown RBP17.42■□□□□ 0.38
SCJ1YMR214W AFT1P22149 690 aa17.41■□□□□ 0.38
SCJ1YMR214W EMI2Q04409 500 aaKnown RBP17.41■□□□□ 0.38
SCJ1YMR214W SEC20P28791 383 aa17.4■□□□□ 0.38
SCJ1YMR214W MYO3P36006 1272 aa17.4■□□□□ 0.38
SCJ1YMR214W CRG1P38892 291 aaRIP-Chip data17.4■□□□□ 0.38not detected
SCJ1YMR214W VID28P40547 921 aa17.4■□□□□ 0.38
SCJ1YMR214W MOT1P32333 1867 aa17.39■□□□□ 0.38
SCJ1YMR214W FMP10P40098 244 aa17.39■□□□□ 0.37
SCJ1YMR214W NPA3P47122 385 aa17.39■□□□□ 0.37
SCJ1YMR214W HDA1P53973 706 aa17.39■□□□□ 0.37
SCJ1YMR214W SPN1Q06505 410 aaPredicted RBP17.39■□□□□ 0.37
SCJ1YMR214W RER2P35196 286 aa17.38■□□□□ 0.37
SCJ1YMR214W NDT80P38830 627 aa17.38■□□□□ 0.37
SCJ1YMR214W TVP23P38962 199 aa17.38■□□□□ 0.37
SCJ1YMR214W UBP15P50101 1230 aa17.38■□□□□ 0.37
SCJ1YMR214W ECM23Q02710 187 aa17.38■□□□□ 0.37
SCJ1YMR214W YML020WQ03722 664 aa17.38■□□□□ 0.37
SCJ1YMR214W VPS20Q04272 221 aa17.38■□□□□ 0.37
SCJ1YMR214W HEH2Q03281 663 aa17.37■□□□□ 0.37
SCJ1YMR214W PWP2P25635 923 aaKnown RBP17.36■□□□□ 0.37
SCJ1YMR214W DSF2P38213 736 aa17.36■□□□□ 0.37
SCJ1YMR214W HUL5P53119 910 aa17.36■□□□□ 0.37
SCJ1YMR214W FUB1P25659 250 aa17.35■□□□□ 0.37
SCJ1YMR214W SMY2P32909 740 aaKnown RBP17.35■□□□□ 0.37
SCJ1YMR214W SKY1Q03656 742 aa17.35■□□□□ 0.37
SCJ1YMR214W PTA1Q01329 785 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms