RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W SIS2P36024 562 aa8.83□□□□□ -1
NUP53YMR153W NOC2P39744 710 aaKnown RBP8.83□□□□□ -1
NUP53YMR153W FMS1P50264 508 aa8.83□□□□□ -1
NUP53YMR153W MDM1Q01846 1127 aa8.83□□□□□ -1
NUP53YMR153W TKL1P23254 680 aaKnown RBP8.82□□□□□ -1
NUP53YMR153W TFC4P33339 1025 aa8.82□□□□□ -1
NUP53YMR153W REG2P38232 338 aa8.82□□□□□ -1
NUP53YMR153W SKP2P42843 763 aa8.82□□□□□ -1
NUP53YMR153W KRI1P42846 591 aaKnown RBP8.82□□□□□ -1
NUP53YMR153W YFL040WP43562 540 aa8.82□□□□□ -1
NUP53YMR153W GCR2Q01722 534 aa8.82□□□□□ -1
NUP53YMR153W GUD1Q07729 489 aa8.82□□□□□ -1
NUP53YMR153W YOR111WQ99210 232 aa8.82□□□□□ -1
NUP53YMR153W PHR1P05066 565 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
NUP53YMR153W POX1P13711 748 aa8.81□□□□□ -1
NUP53YMR153W PWP2P25635 923 aaKnown RBP8.81□□□□□ -1
NUP53YMR153W WHI3P34761 661 aaKnown RBP8.81□□□□□ -1
NUP53YMR153W AVT3P36062 692 aa8.81□□□□□ -1
NUP53YMR153W HXT13P39924 564 aa8.81□□□□□ -1
NUP53YMR153W TPM2P40414 161 aa8.81□□□□□ -1
NUP53YMR153W SCS3P53012 380 aa8.81□□□□□ -1
NUP53YMR153W FMP30Q02883 468 aa8.81□□□□□ -1
NUP53YMR153W VIP1Q06685 1146 aaKnown RBP8.81□□□□□ -1
NUP53YMR153W DSE3Q08729 430 aa8.81□□□□□ -1
NUP53YMR153W TRM11Q12463 433 aa8.81□□□□□ -1
NUP53YMR153W RPL8AP17076 256 aaKnown RBP8.8□□□□□ -1
NUP53YMR153W SEC8P32855 1065 aa8.8□□□□□ -1
NUP53YMR153W GPT2P36148 743 aa8.8□□□□□ -1
NUP53YMR153W LIF1P53150 421 aa8.8□□□□□ -1
NUP53YMR153W UBR2Q07963 1872 aa8.8□□□□□ -1
NUP53YMR153W CIT1P00890 479 aa8.8□□□□□ -1
NUP53YMR153W RNR3P21672 869 aaKnown RBP8.8□□□□□ -1
NUP53YMR153W DLD1P32891 587 aa8.8□□□□□ -1
NUP53YMR153W YMR321CQ04898 105 aa8.8□□□□□ -1
NUP53YMR153W MIP1P15801 1254 aa8.79□□□□□ -1
NUP53YMR153W DBP7P36120 742 aaKnown RBP8.79□□□□□ -1
NUP53YMR153W CTR1P49573 406 aa8.79□□□□□ -1
NUP53YMR153W DAK1P54838 584 aaKnown RBP8.79□□□□□ -1
NUP53YMR153W ISA1Q07821 250 aaPredicted RBP8.79□□□□□ -1
NUP53YMR153W RTP1Q12751 981 aa8.79□□□□□ -1
NUP53YMR153W FKS1P38631 1876 aaKnown RBP8.79□□□□□ -1
NUP53YMR153W TY1B-AO13527 1196 aaKnown RBP8.78□□□□□ -1
NUP53YMR153W TIM23P32897 222 aa8.78□□□□□ -1
NUP53YMR153W AKR1P39010 764 aa8.78□□□□□ -1
NUP53YMR153W EAR1Q03212 550 aa8.78□□□□□ -1
NUP53YMR153W MAS2P11914 482 aa8.77□□□□□ -1.01
NUP53YMR153W VID28P40547 921 aa8.77□□□□□ -1.01
NUP53YMR153W ASE1P50275 885 aa8.77□□□□□ -1.01
NUP53YMR153W YVH1Q02256 364 aaKnown RBP8.77□□□□□ -1.01
NUP53YMR153W VPS72Q03388 795 aa8.77□□□□□ -1.01
NUP53YMR153W YDR341CQ05506 607 aaKnown RBP8.77□□□□□ -1.01
NUP53YMR153W OXR1Q08952 273 aa8.77□□□□□ -1.01
NUP53YMR153W SES1P07284 462 aaKnown RBP8.76□□□□□ -1.01
NUP53YMR153W UGA4P32837 571 aa8.76□□□□□ -1.01
NUP53YMR153W FLR1P38124 548 aa8.76□□□□□ -1.01
NUP53YMR153W SPO22P40511 975 aa8.76□□□□□ -1.01
NUP53YMR153W ARP5P53946 755 aa8.76□□□□□ -1.01
NUP53YMR153W PTA1Q01329 785 aaPredicted RBP8.76□□□□□ -1.01
NUP53YMR153W YDR524C-BQ3E6R4 66 aa8.76□□□□□ -1.01
NUP53YMR153W MET6P05694 767 aaKnown RBP8.75□□□□□ -1.01
NUP53YMR153W STI1P15705 589 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
NUP53YMR153W PAN5P38787 379 aa8.75□□□□□ -1.01
NUP53YMR153W RPS7BP48164 190 aaKnown RBP8.75□□□□□ -1.01
NUP53YMR153W UBP15P50101 1230 aa8.75□□□□□ -1.01
NUP53YMR153W HUL5P53119 910 aa8.75□□□□□ -1.01
NUP53YMR153W YLL058WQ12198 575 aa8.75□□□□□ -1.01
NUP53YMR153W SNA3P14359 133 aa8.74□□□□□ -1.01
NUP53YMR153W HCA4P20448 770 aaKnown RBP8.74□□□□□ -1.01
NUP53YMR153W SUL1P38359 859 aa8.74□□□□□ -1.01
NUP53YMR153W AIM9P40053 627 aaKnown RBP8.74□□□□□ -1.01
NUP53YMR153W EPL1P43572 832 aa8.74□□□□□ -1.01
NUP53YMR153W SMD2Q06217 110 aaKnown RBP8.74□□□□□ -1.01
NUP53YMR153W HIP1P06775 603 aa8.73□□□□□ -1.01
NUP53YMR153W HEM1P09950 548 aaPredicted RBP8.73□□□□□ -1.01
NUP53YMR153W FBP26P32604 452 aa8.73□□□□□ -1.01
NUP53YMR153W SVF1Q05515 481 aa8.73□□□□□ -1.01
NUP53YMR153W YLR326WQ06170 240 aaKnown RBP8.73□□□□□ -1.01
NUP53YMR153W AHC1Q12433 566 aa8.73□□□□□ -1.01
NUP53YMR153W SAS3P34218 831 aa8.72□□□□□ -1.01
NUP53YMR153W YKE2P52553 114 aa8.72□□□□□ -1.01
NUP53YMR153W ECM23Q02710 187 aa8.72□□□□□ -1.01
NUP53YMR153W RIF1P29539 1916 aa8.72□□□□□ -1.01
NUP53YMR153W YPR117WQ06116 2489 aa8.72□□□□□ -1.01
NUP53YMR153W MAK11P20484 414 aaKnown RBP8.71□□□□□ -1.01
NUP53YMR153W GRS1P38088 690 aaKnown RBP8.71□□□□□ -1.01
NUP53YMR153W MSC7P38694 644 aa8.71□□□□□ -1.01
NUP53YMR153W CCT3P39077 534 aaKnown RBP8.71□□□□□ -1.01
NUP53YMR153W BNI5P53890 448 aaKnown RBP8.71□□□□□ -1.01
NUP53YMR153W MSC2Q03455 724 aa8.71□□□□□ -1.01
NUP53YMR153W GIS4Q04233 774 aa8.71□□□□□ -1.01
NUP53YMR153W TSR3Q12094 313 aaKnown RBP8.71□□□□□ -1.01
NUP53YMR153W LDB19Q12502 818 aa8.71□□□□□ -1.01
NUP53YMR153W ARP6Q12509 438 aa8.71□□□□□ -1.01
NUP53YMR153W CLB5P30283 435 aa8.71□□□□□ -1.02
NUP53YMR153W DUR3P33413 735 aa8.71□□□□□ -1.02
NUP53YMR153W BMH2P34730 273 aaKnown RBP8.71□□□□□ -1.02
NUP53YMR153W ISW1P38144 1129 aa8.71□□□□□ -1.02
NUP53YMR153W RXT2P38255 430 aa8.71□□□□□ -1.02
NUP53YMR153W PCI8P40512 444 aa8.71□□□□□ -1.02
NUP53YMR153W SGM1P47166 707 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms