RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W PMI40P29952 429 aaKnown RBP3.21□□□□□ -1.9
PRP39YML046W BOL3P39724 118 aa3.21□□□□□ -1.9
PRP39YML046W SLS1P42900 643 aa3.21□□□□□ -1.9
PRP39YML046W UFD2P54860 961 aa3.21□□□□□ -1.9
PRP39YML046W MCM5P29496 775 aaKnown RBP3.2□□□□□ -1.9
PRP39YML046W RSA3Q05942 220 aaKnown RBP3.2□□□□□ -1.9
PRP39YML046W RSC58Q07979 502 aa3.2□□□□□ -1.9
PRP39YML046W NTO1Q12311 748 aa3.2□□□□□ -1.9
PRP39YML046W DOM34P33309 386 aa3.2□□□□□ -1.9
PRP39YML046W HNT2P49775 206 aa3.2□□□□□ -1.9
PRP39YML046W CYC1P00044 109 aaPredicted RBP3.19□□□□□ -1.9
PRP39YML046W FLP1P03870 423 aa3.19□□□□□ -1.9
PRP39YML046W STE11P23561 717 aa3.19□□□□□ -1.9
PRP39YML046W EXO5P38289 585 aa3.19□□□□□ -1.9
PRP39YML046W NEM1P38757 446 aa3.19□□□□□ -1.9
PRP39YML046W MTR4P47047 1073 aaKnown RBP3.19□□□□□ -1.9
PRP39YML046W YJL045WP47052 634 aa3.19□□□□□ -1.9
PRP39YML046W MNN10P50108 393 aaKnown RBP3.19□□□□□ -1.9
PRP39YML046W MCM6P53091 1017 aaKnown RBP3.19□□□□□ -1.9
PRP39YML046W NUT1P53114 1132 aa3.19□□□□□ -1.9
PRP39YML046W ROT1Q03691 256 aa3.19□□□□□ -1.9
PRP39YML046W CHS7P38843 316 aa3.18□□□□□ -1.9
PRP39YML046W SHU2P38957 223 aa3.18□□□□□ -1.9
PRP39YML046W BSC2Q05611 235 aa3.18□□□□□ -1.9
PRP39YML046W TMA10Q06177 86 aa3.18□□□□□ -1.9
PRP39YML046W LAP2Q10740 671 aa3.18□□□□□ -1.9
PRP39YML046W DUS4Q06063 367 aa3.17□□□□□ -1.9
PRP39YML046W SNM1P40993 198 aa3.16□□□□□ -1.9
PRP39YML046W LST4P34239 828 aa3.16□□□□□ -1.9
PRP39YML046W ATG14P38270 344 aa3.16□□□□□ -1.9
PRP39YML046W RXT3Q07458 294 aa3.16□□□□□ -1.9
PRP39YML046W NOB1Q08444 459 aaKnown RBP3.16□□□□□ -1.9
PRP39YML046W COQ4O13525 335 aa3.15□□□□□ -1.91
PRP39YML046W CDC20P26309 610 aa3.15□□□□□ -1.91
PRP39YML046W YSC84P32793 468 aa3.15□□□□□ -1.91
PRP39YML046W RVS167P39743 482 aaKnown RBP3.15□□□□□ -1.91
PRP39YML046W SEC26P41810 973 aaKnown RBP3.15□□□□□ -1.91
PRP39YML046W ACK1Q07622 623 aaPredicted RBP3.15□□□□□ -1.91
PRP39YML046W CCZ1P38273 704 aa3.14□□□□□ -1.91
PRP39YML046W GLO3P38682 493 aaKnown RBP3.14□□□□□ -1.91
PRP39YML046W XKS1P42826 600 aa3.14□□□□□ -1.91
PRP39YML046W PHO23P50947 330 aa3.14□□□□□ -1.91
PRP39YML046W MON1P53129 644 aa3.14□□□□□ -1.91
PRP39YML046W YNL011CP53980 444 aa3.14□□□□□ -1.91
PRP39YML046W PLB2Q03674 706 aa3.14□□□□□ -1.91
PRP39YML046W UTP5Q04177 643 aaKnown RBP3.14□□□□□ -1.91
PRP39YML046W SSA4P22202 642 aaKnown RBP3.13□□□□□ -1.91
PRP39YML046W QNS1P38795 714 aaKnown RBP3.13□□□□□ -1.91
PRP39YML046W PPM2Q08282 695 aa3.13□□□□□ -1.91
PRP39YML046W YNR063WP53749 607 aa3.12□□□□□ -1.91
PRP39YML046W CDC55Q00362 526 aa3.12□□□□□ -1.91
PRP39YML046W KIN4Q01919 800 aa3.12□□□□□ -1.91
PRP39YML046W GPB1Q08886 897 aa3.12□□□□□ -1.91
PRP39YML046W QDR1P40475 563 aa3.11□□□□□ -1.91
PRP39YML046W RCL1Q08096 367 aaPredicted RBP3.11□□□□□ -1.91
PRP39YML046W INP54Q08227 384 aaKnown RBP3.11□□□□□ -1.91
PRP39YML046W RSB1Q08417 382 aa3.11□□□□□ -1.91
PRP39YML046W GAL10P04397 699 aa3.11□□□□□ -1.91
PRP39YML046W PMA1P05030 918 aaKnown RBP3.11□□□□□ -1.91
PRP39YML046W CMP2P14747 604 aa3.1□□□□□ -1.91
PRP39YML046W DEF1P35732 738 aaKnown RBP3.1□□□□□ -1.91
PRP39YML046W VPS53P47061 822 aa3.1□□□□□ -1.91
PRP39YML046W PBP1P53297 722 aaKnown RBP3.1□□□□□ -1.91
PRP39YML046W BDF2Q07442 638 aa3.1□□□□□ -1.91
PRP39YML046W OAR1P35731 278 aa3.09□□□□□ -1.91
PRP39YML046W MSS4P38994 779 aa3.09□□□□□ -1.91
PRP39YML046W NOG1Q02892 647 aaKnown RBP3.09□□□□□ -1.91
PRP39YML046W RSM24Q03976 319 aa3.09□□□□□ -1.91
PRP39YML046W TRS120Q04183 1289 aa3.09□□□□□ -1.91
PRP39YML046W CDC6P09119 513 aa3.09□□□□□ -1.92
PRP39YML046W ATF1P40353 525 aa3.09□□□□□ -1.92
PRP39YML046W UBA2P52488 636 aa3.09□□□□□ -1.92
PRP39YML046W YAP6Q03935 383 aa3.09□□□□□ -1.92
PRP39YML046W MSH3P25336 1018 aa3.08□□□□□ -1.92
PRP39YML046W TNA1P53322 534 aa3.08□□□□□ -1.92
PRP39YML046W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
PRP39YML046W VMA4P22203 233 aaKnown RBP3.07□□□□□ -1.92
PRP39YML046W DCG1P32460 244 aa3.07□□□□□ -1.92
PRP39YML046W BAP2P38084 609 aa3.07□□□□□ -1.92
PRP39YML046W MOH1P38191 138 aa3.07□□□□□ -1.92
PRP39YML046W PIK1P39104 1066 aa3.07□□□□□ -1.92
PRP39YML046W YLR224WQ05947 369 aa3.07□□□□□ -1.92
PRP39YML046W MNL2Q12205 849 aa3.07□□□□□ -1.92
PRP39YML046W SPO21Q12411 609 aa3.07□□□□□ -1.92
PRP39YML046W VPS62P53285 467 aa3.07□□□□□ -1.92
PRP39YML046W PEX13P80667 386 aa3.07□□□□□ -1.92
PRP39YML046W RKM2Q03942 479 aa3.07□□□□□ -1.92
PRP39YML046W KAR5Q04746 504 aa3.07□□□□□ -1.92
PRP39YML046W SRM1P21827 482 aa3.06□□□□□ -1.92
PRP39YML046W HOS3Q02959 697 aaKnown RBP3.06□□□□□ -1.92
PRP39YML046W KIP1P28742 1111 aa3.05□□□□□ -1.92
PRP39YML046W RFC5P38251 354 aa3.05□□□□□ -1.92
PRP39YML046W GPB2P39717 880 aa3.05□□□□□ -1.92
PRP39YML046W ACF4P47129 309 aa3.05□□□□□ -1.92
PRP39YML046W ATG1P53104 897 aa3.05□□□□□ -1.92
PRP39YML046W GTF1P53260 183 aaPredicted RBP3.05□□□□□ -1.92
PRP39YML046W LGE1Q02796 332 aaKnown RBP3.05□□□□□ -1.92
PRP39YML046W NOC3Q07896 663 aaPredicted RBP3.05□□□□□ -1.92
PRP39YML046W EMC1P25574 760 aa3.04□□□□□ -1.92
PRP39YML046W SNF5P18480 905 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms