RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C VAC14Q06708 880 aa6.71□□□□□ -1.33
SKI2YLR398C OXR1Q08952 273 aa6.71□□□□□ -1.33
SKI2YLR398C MAL33P38157 468 aa6.71□□□□□ -1.34
SKI2YLR398C PDS1P40316 373 aaPredicted RBP6.71□□□□□ -1.34
SKI2YLR398C MIC19P43594 170 aa6.71□□□□□ -1.34
SKI2YLR398C SHE4P51534 789 aa6.71□□□□□ -1.34
SKI2YLR398C SUI3P09064 285 aaKnown RBP6.71□□□□□ -1.34
SKI2YLR398C KRS1P15180 591 aaKnown RBP6.71□□□□□ -1.34
SKI2YLR398C CDC48P25694 835 aaKnown RBP6.71□□□□□ -1.34
SKI2YLR398C SEC8P32855 1065 aa6.71□□□□□ -1.34
SKI2YLR398C SMF1P38925 575 aa6.71□□□□□ -1.34
SKI2YLR398C RMR1P53060 241 aa6.71□□□□□ -1.34
SKI2YLR398C YNL058CP53947 316 aa6.71□□□□□ -1.34
SKI2YLR398C SOV1Q04748 898 aa6.71□□□□□ -1.34
SKI2YLR398C RAD3P06839 778 aa6.7□□□□□ -1.34
SKI2YLR398C YKR078WP36158 585 aaKnown RBP6.7□□□□□ -1.34
SKI2YLR398C BOI1P38041 980 aaKnown RBP6.7□□□□□ -1.34
SKI2YLR398C YVC1Q12324 675 aa6.7□□□□□ -1.34
SKI2YLR398C DUR1,2P32528 1835 aaKnown RBP6.7□□□□□ -1.34
SKI2YLR398C OXP1P28273 1286 aa6.7□□□□□ -1.34
SKI2YLR398C YEL1P34225 687 aa6.7□□□□□ -1.34
SKI2YLR398C UBP13P38187 747 aa6.7□□□□□ -1.34
SKI2YLR398C NOP9P47077 666 aaKnown RBP6.7□□□□□ -1.34
SKI2YLR398C LGE1Q02796 332 aaKnown RBP6.7□□□□□ -1.34
SKI2YLR398C SFH1Q06168 426 aa6.7□□□□□ -1.34
SKI2YLR398C YIL177CP40434 1758 aa6.7□□□□□ -1.34
SKI2YLR398C YJL225CP40889 1758 aa6.7□□□□□ -1.34
SKI2YLR398C DRS2P39524 1355 aa6.7□□□□□ -1.34
SKI2YLR398C GFA1P14742 717 aaKnown RBP6.7□□□□□ -1.34
SKI2YLR398C VHS3Q08438 674 aa6.7□□□□□ -1.34
SKI2YLR398C TRM3Q07527 1436 aa6.69□□□□□ -1.34
SKI2YLR398C PDC6P26263 563 aaKnown RBP6.69□□□□□ -1.34
SKI2YLR398C YFL034WP43564 1073 aa6.69□□□□□ -1.34
SKI2YLR398C PLP1Q04004 230 aa6.69□□□□□ -1.34
SKI2YLR398C RAD5P32849 1169 aaPredicted RBP6.69□□□□□ -1.34
SKI2YLR398C GGA2P38817 585 aaKnown RBP6.69□□□□□ -1.34
SKI2YLR398C YPL109CQ02981 657 aa6.69□□□□□ -1.34
SKI2YLR398C BUG1Q12191 341 aa6.69□□□□□ -1.34
SKI2YLR398C SWI6P09959 803 aa6.69□□□□□ -1.34
SKI2YLR398C ALE1Q08548 619 aa6.69□□□□□ -1.34
SKI2YLR398C RKM4Q12504 494 aa6.69□□□□□ -1.34
SKI2YLR398C FES1P38260 290 aa6.68□□□□□ -1.34
SKI2YLR398C RPC17P47076 161 aa6.68□□□□□ -1.34
SKI2YLR398C RPS12P48589 143 aaKnown RBP6.68□□□□□ -1.34
SKI2YLR398C MLC1P53141 149 aa6.68□□□□□ -1.34
SKI2YLR398C SPP382Q06411 708 aaPredicted RBP6.68□□□□□ -1.34
SKI2YLR398C APM4Q99186 491 aa6.68□□□□□ -1.34
SKI2YLR398C SSA1P10591 642 aaKnown RBP6.68□□□□□ -1.34
SKI2YLR398C BUD2P33314 1104 aa6.68□□□□□ -1.34
SKI2YLR398C RPC37P36121 282 aa6.68□□□□□ -1.34
SKI2YLR398C IOC3P43596 787 aa6.68□□□□□ -1.34
SKI2YLR398C IRC6P43615 237 aa6.68□□□□□ -1.34
SKI2YLR398C SLU7Q02775 382 aaKnown RBP6.68□□□□□ -1.34
SKI2YLR398C GIS4Q04233 774 aa6.68□□□□□ -1.34
SKI2YLR398C BDF2Q07442 638 aa6.68□□□□□ -1.34
SKI2YLR398C NOT5Q12514 560 aaPredicted RBP6.68□□□□□ -1.34
SKI2YLR398C HAP1P0CE41 1502 aa6.68□□□□□ -1.34
SKI2YLR398C RTC1Q08281 1341 aa6.68□□□□□ -1.34
SKI2YLR398C COQ4O13525 335 aa6.68□□□□□ -1.34
SKI2YLR398C PRP16P15938 1071 aaPredicted RBP6.68□□□□□ -1.34
SKI2YLR398C SPP381P38282 291 aaPredicted RBP6.68□□□□□ -1.34
SKI2YLR398C SWD1P39706 426 aa6.68□□□□□ -1.34
SKI2YLR398C CTK3P46963 296 aaPredicted RBP6.68□□□□□ -1.34
SKI2YLR398C PSK2Q08217 1101 aa6.68□□□□□ -1.34
SKI2YLR398C CHS5Q12114 671 aaKnown RBP6.68□□□□□ -1.34
SKI2YLR398C KRE5P22023 1365 aa6.68□□□□□ -1.34
SKI2YLR398C PRT1P06103 763 aaKnown RBP6.67□□□□□ -1.34
SKI2YLR398C MEF1P25039 761 aa6.67□□□□□ -1.34
SKI2YLR398C AAD3P25612 363 aa6.67□□□□□ -1.34
SKI2YLR398C PYC2P32327 1180 aaKnown RBP6.67□□□□□ -1.34
SKI2YLR398C SRP40P32583 406 aaPredicted RBP6.67□□□□□ -1.34
SKI2YLR398C ECM21P38167 1117 aaKnown RBP6.67□□□□□ -1.34
SKI2YLR398C PEA2P40091 420 aa6.67□□□□□ -1.34
SKI2YLR398C HEF3P53978 1044 aaKnown RBP6.67□□□□□ -1.34
SKI2YLR398C NUP157P40064 1391 aaKnown RBP6.67□□□□□ -1.34
SKI2YLR398C SPO16P17122 198 aa6.67□□□□□ -1.34
SKI2YLR398C YET1P35723 206 aa6.67□□□□□ -1.34
SKI2YLR398C URH1Q04179 340 aa6.67□□□□□ -1.34
SKI2YLR398C TOM70P07213 617 aaKnown RBP6.67□□□□□ -1.34
SKI2YLR398C PET111P08468 800 aa6.67□□□□□ -1.34
SKI2YLR398C RPC82P32349 654 aa6.67□□□□□ -1.34
SKI2YLR398C RPT3P33298 428 aaKnown RBP6.67□□□□□ -1.34
SKI2YLR398C VMA22P38784 181 aa6.67□□□□□ -1.34
SKI2YLR398C BNR1P40450 1375 aa6.66□□□□□ -1.34
SKI2YLR398C SSB1P11484 613 aaKnown RBP6.66□□□□□ -1.34
SKI2YLR398C STN1P38960 494 aa6.66□□□□□ -1.34
SKI2YLR398C SSB2P40150 613 aaKnown RBP6.66□□□□□ -1.34
SKI2YLR398C PXR1P53335 271 aaPredicted RBP6.66□□□□□ -1.34
SKI2YLR398C SYF1Q04048 859 aaPredicted RBP6.66□□□□□ -1.34
SKI2YLR398C USO1P25386 1790 aa6.66□□□□□ -1.34
SKI2YLR398C TRL1P09880 827 aaKnown RBP6.66□□□□□ -1.34
SKI2YLR398C STI1P15705 589 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SKI2YLR398C RPS5P26783 225 aaKnown RBP6.66□□□□□ -1.34
SKI2YLR398C SHU2P38957 223 aa6.66□□□□□ -1.34
SKI2YLR398C MAM1P40065 302 aa6.66□□□□□ -1.34
SKI2YLR398C CIK1Q01649 594 aa6.66□□□□□ -1.34
SKI2YLR398C MPC54Q08550 464 aa6.66□□□□□ -1.34
SKI2YLR398C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SKI2YLR398C ADF1Q2V2Q1 113 aa6.66□□□□□ -1.34
SKI2YLR398C SEY1Q99287 776 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms