RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C OXP1P28273 1286 aa7.96□□□□□ -1.14
AFG2YLR397C MRF1P30775 413 aaPredicted RBP7.96□□□□□ -1.14
AFG2YLR397C ASF1P32447 279 aa7.96□□□□□ -1.14
AFG2YLR397C NUP120P35729 1037 aa7.96□□□□□ -1.14
AFG2YLR397C MET18P40469 1032 aa7.96□□□□□ -1.14
AFG2YLR397C YIL001WP40560 513 aa7.96□□□□□ -1.14
AFG2YLR397C TRS85P46944 698 aa7.96□□□□□ -1.14
AFG2YLR397C RNR4P49723 345 aaKnown RBP7.96□□□□□ -1.14
AFG2YLR397C EIS1Q05050 843 aaKnown RBP7.96□□□□□ -1.14
AFG2YLR397C VID27P40157 782 aa7.95□□□□□ -1.14
AFG2YLR397C PCL10P53124 433 aa7.95□□□□□ -1.14
AFG2YLR397C BUD21Q08492 214 aaPredicted RBP7.95□□□□□ -1.14
AFG2YLR397C RIB2Q12362 591 aaKnown RBP7.95□□□□□ -1.14
AFG2YLR397C CDC31P06704 161 aaKnown RBP7.95□□□□□ -1.14
AFG2YLR397C PET122P10355 254 aa7.95□□□□□ -1.14
AFG2YLR397C MRPL25P23369 157 aa7.95□□□□□ -1.14
AFG2YLR397C STE11P23561 717 aa7.95□□□□□ -1.14
AFG2YLR397C YSW1P38280 609 aa7.95□□□□□ -1.14
AFG2YLR397C SPP381P38282 291 aaPredicted RBP7.95□□□□□ -1.14
AFG2YLR397C AMN1P38285 549 aaPredicted RBP7.95□□□□□ -1.14
AFG2YLR397C SET1P38827 1080 aaKnown RBP7.95□□□□□ -1.14
AFG2YLR397C YEL023CP39992 682 aa7.95□□□□□ -1.14
AFG2YLR397C ERP6P53198 216 aa7.95□□□□□ -1.14
AFG2YLR397C HEF3P53978 1044 aaKnown RBP7.95□□□□□ -1.14
AFG2YLR397C MEH1Q02205 184 aa7.95□□□□□ -1.14
AFG2YLR397C ADA2Q02336 434 aa7.95□□□□□ -1.14
AFG2YLR397C TRS120Q04183 1289 aa7.95□□□□□ -1.14
AFG2YLR397C SWI1P09547 1314 aa7.94□□□□□ -1.14
AFG2YLR397C ARC19P33204 171 aaKnown RBP7.94□□□□□ -1.14
AFG2YLR397C NOC2P39744 710 aaKnown RBP7.94□□□□□ -1.14
AFG2YLR397C YML108WQ03759 105 aa7.94□□□□□ -1.14
AFG2YLR397C ITT1Q04638 464 aa7.94□□□□□ -1.14
AFG2YLR397C COA4Q05809 96 aa7.94□□□□□ -1.14
AFG2YLR397C PET494P07390 489 aaPredicted RBP7.94□□□□□ -1.14
AFG2YLR397C GPA1P08539 472 aa7.94□□□□□ -1.14
AFG2YLR397C RSR1P13856 272 aa7.94□□□□□ -1.14
AFG2YLR397C THR1P17423 357 aaKnown RBP7.94□□□□□ -1.14
AFG2YLR397C RAD53P22216 821 aa7.94□□□□□ -1.14
AFG2YLR397C VMA22P38784 181 aa7.94□□□□□ -1.14
AFG2YLR397C SCS2P40075 244 aaKnown RBP7.94□□□□□ -1.14
AFG2YLR397C IMD4P50094 524 aaKnown RBP7.94□□□□□ -1.14
AFG2YLR397C TAF8Q03750 510 aa7.94□□□□□ -1.14
AFG2YLR397C FUS2Q05670 677 aa7.94□□□□□ -1.14
AFG2YLR397C MCP2Q06567 569 aa7.94□□□□□ -1.14
AFG2YLR397C RTT109Q07794 436 aa7.94□□□□□ -1.14
AFG2YLR397C ABP140Q08641 628 aaKnown RBP7.94□□□□□ -1.14
AFG2YLR397C GPR1Q12361 961 aa7.94□□□□□ -1.14
AFG2YLR397C RTP1Q12751 981 aa7.94□□□□□ -1.14
AFG2YLR397C YBL113CQ7M4S9 792 aa7.94□□□□□ -1.14
AFG2YLR397C DRS2P39524 1355 aa7.93□□□□□ -1.14
AFG2YLR397C CLB3P24870 427 aa7.93□□□□□ -1.14
AFG2YLR397C REV7P38927 245 aa7.93□□□□□ -1.14
AFG2YLR397C YER156CP40093 338 aaKnown RBP7.93□□□□□ -1.14
AFG2YLR397C RIM21P48565 533 aa7.93□□□□□ -1.14
AFG2YLR397C TEL2P53038 688 aa7.93□□□□□ -1.14
AFG2YLR397C NCS2P53923 493 aaPredicted RBP7.93□□□□□ -1.14
AFG2YLR397C YKR005CQ02203 525 aa7.93□□□□□ -1.14
AFG2YLR397C PPM1Q04081 328 aa7.93□□□□□ -1.14
AFG2YLR397C SPP382Q06411 708 aaPredicted RBP7.93□□□□□ -1.14
AFG2YLR397C NAT1P12945 854 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C HIR2P32480 875 aa7.92□□□□□ -1.14
AFG2YLR397C SRP40P32583 406 aaPredicted RBP7.92□□□□□ -1.14
AFG2YLR397C STO1P34160 861 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C SEG2P34250 1132 aa7.92□□□□□ -1.14
AFG2YLR397C ETP1P38748 585 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C YER130CP39959 443 aa7.92□□□□□ -1.14
AFG2YLR397C HAM1P47119 197 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C COG6P53959 839 aa7.92□□□□□ -1.14
AFG2YLR397C ATP25Q03153 612 aa7.92□□□□□ -1.14
AFG2YLR397C CWC15Q03772 175 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C SXM1Q04175 944 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C MST1P07236 462 aa7.92□□□□□ -1.14
AFG2YLR397C HMG1P12683 1054 aa7.92□□□□□ -1.14
AFG2YLR397C CDC10P25342 322 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C OCA4P25366 362 aa7.92□□□□□ -1.14
AFG2YLR397C COY1P34237 679 aa7.92□□□□□ -1.14
AFG2YLR397C GVP36P40531 326 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C ARI1P53111 347 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C SLU7Q02775 382 aaKnown RBP7.92□□□□□ -1.14
AFG2YLR397C YLH47Q06493 454 aa7.92□□□□□ -1.14
AFG2YLR397C PMT7Q06644 662 aa7.92□□□□□ -1.14
AFG2YLR397C YBT1P32386 1661 aa7.91□□□□□ -1.14
AFG2YLR397C PEX5P35056 612 aa7.91□□□□□ -1.14
AFG2YLR397C SWC5P38326 303 aa7.91□□□□□ -1.14
AFG2YLR397C SDS3P40505 327 aa7.91□□□□□ -1.14
AFG2YLR397C YNL058CP53947 316 aa7.91□□□□□ -1.14
AFG2YLR397C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14 RIP-Chip
AFG2YLR397C JIP5Q06214 492 aaPredicted RBP7.91□□□□□ -1.14
AFG2YLR397C OCA6Q12454 224 aa7.91□□□□□ -1.14
AFG2YLR397C SEC21P32074 935 aaKnown RBP7.91□□□□□ -1.14
AFG2YLR397C ZPR1P53303 486 aaKnown RBP7.91□□□□□ -1.14
AFG2YLR397C MLP1Q02455 1875 aaKnown RBP7.91□□□□□ -1.14
AFG2YLR397C ADY2P25613 283 aa7.9□□□□□ -1.14
AFG2YLR397C GYP6P32806 458 aa7.9□□□□□ -1.14
AFG2YLR397C PRX1P34227 261 aaKnown RBP7.9□□□□□ -1.14
AFG2YLR397C YKL222CP35995 705 aa7.9□□□□□ -1.14
AFG2YLR397C UBP6P43593 499 aaKnown RBP7.9□□□□□ -1.14
AFG2YLR397C COP1P53622 1201 aaKnown RBP7.9□□□□□ -1.14
AFG2YLR397C RSM24Q03976 319 aa7.9□□□□□ -1.14
AFG2YLR397C TSR3Q12094 313 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms