RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C LSB1P53281 241 aa10.33□□□□□ -0.76
SEC61YLR378C TUS1Q06412 1307 aa10.33□□□□□ -0.76
SEC61YLR378C THS1P04801 734 aaKnown RBP10.33□□□□□ -0.76
SEC61YLR378C THR4P16120 514 aaKnown RBP10.33□□□□□ -0.76
SEC61YLR378C URA1P28272 314 aaPredicted RBP10.33□□□□□ -0.76
SEC61YLR378C BMH1P29311 267 aaKnown RBP10.33□□□□□ -0.76
SEC61YLR378C MRPL10P36520 322 aa10.33□□□□□ -0.76
SEC61YLR378C CSM3Q04659 317 aa10.33□□□□□ -0.76
SEC61YLR378C MMR1Q06324 491 aa10.33□□□□□ -0.76
SEC61YLR378C VIP1Q06685 1146 aaKnown RBP10.33□□□□□ -0.76
SEC61YLR378C MYO1P08964 1928 aa10.32□□□□□ -0.76
SEC61YLR378C TUB2P02557 457 aaKnown RBP10.32□□□□□ -0.76
SEC61YLR378C ERG12P07277 443 aa10.32□□□□□ -0.76
SEC61YLR378C ALG1P16661 449 aa10.32□□□□□ -0.76
SEC61YLR378C RPL8AP17076 256 aaKnown RBP10.32□□□□□ -0.76
SEC61YLR378C SAM2P19358 384 aaKnown RBP10.32□□□□□ -0.76
SEC61YLR378C ATE1P16639 503 aa10.31□□□□□ -0.76
SEC61YLR378C PWP2P25635 923 aaKnown RBP10.31□□□□□ -0.76
SEC61YLR378C MCM4P30665 933 aaKnown RBP10.31□□□□□ -0.76
SEC61YLR378C EBP2P36049 427 aaKnown RBP10.31□□□□□ -0.76
SEC61YLR378C RET3P53600 189 aa10.31□□□□□ -0.76
SEC61YLR378C BNI5P53890 448 aaKnown RBP10.31□□□□□ -0.76
SEC61YLR378C YLR278CQ05854 1341 aa10.31□□□□□ -0.76
SEC61YLR378C SPB4P25808 606 aaPredicted RBP10.3□□□□□ -0.76
SEC61YLR378C GSY2P27472 705 aa10.3□□□□□ -0.76
SEC61YLR378C SAC6P32599 642 aaKnown RBP10.3□□□□□ -0.76
SEC61YLR378C ASE1P50275 885 aa10.3□□□□□ -0.76
SEC61YLR378C SOL4P53315 255 aa10.3□□□□□ -0.76
SEC61YLR378C TRS120Q04183 1289 aa10.3□□□□□ -0.76
SEC61YLR378C SLK19Q08581 821 aaKnown RBP10.3□□□□□ -0.76
SEC61YLR378C PTC5Q12511 572 aa10.3□□□□□ -0.76
SEC61YLR378C SPT21P35209 758 aa10.29□□□□□ -0.76
SEC61YLR378C STT3P39007 718 aaKnown RBP10.29□□□□□ -0.76
SEC61YLR378C NOC2P39744 710 aaKnown RBP10.29□□□□□ -0.76
SEC61YLR378C ACA1P39970 489 aa10.29□□□□□ -0.76
SEC61YLR378C TFG2P41896 400 aaPredicted RBP10.29□□□□□ -0.76
SEC61YLR378C DSE4P53753 1117 aa10.29□□□□□ -0.76
SEC61YLR378C HIS4P00815 799 aaKnown RBP10.28□□□□□ -0.76
SEC61YLR378C TIF4631P39935 952 aaKnown RBP10.28□□□□□ -0.76
SEC61YLR378C CSR2Q12734 1121 aa10.28□□□□□ -0.76
SEC61YLR378C SRP40P32583 406 aaPredicted RBP10.27□□□□□ -0.77
SEC61YLR378C SDA1P53313 767 aaKnown RBP10.27□□□□□ -0.77
SEC61YLR378C UTP4Q06679 776 aaKnown RBP10.27□□□□□ -0.77
SEC61YLR378C SUB2Q07478 446 aaKnown RBP10.27□□□□□ -0.77
SEC61YLR378C TUF1P02992 437 aaKnown RBP10.26□□□□□ -0.77
SEC61YLR378C SES1P07284 462 aaKnown RBP10.26□□□□□ -0.77
SEC61YLR378C CDC15P27636 974 aa10.26□□□□□ -0.77
SEC61YLR378C MPE1P35728 441 aaKnown RBP10.26□□□□□ -0.77
SEC61YLR378C FYV10P40492 516 aa10.26□□□□□ -0.77
SEC61YLR378C DAK2P43550 591 aa10.26□□□□□ -0.77
SEC61YLR378C SSL2Q00578 843 aa10.26□□□□□ -0.77
SEC61YLR378C HCR1Q05775 265 aaKnown RBP10.26□□□□□ -0.77
SEC61YLR378C SRO9P25567 434 aaKnown RBP10.25□□□□□ -0.77
SEC61YLR378C LYS14P40971 790 aa10.25□□□□□ -0.77
SEC61YLR378C SUE1Q06524 206 aa10.25□□□□□ -0.77
SEC61YLR378C PSR2Q07949 397 aa10.25□□□□□ -0.77
SEC61YLR378C KRS1P15180 591 aaKnown RBP10.24□□□□□ -0.77
SEC61YLR378C PEA2P40091 420 aa10.24□□□□□ -0.77
SEC61YLR378C CWC15Q03772 175 aaKnown RBP10.24□□□□□ -0.77
SEC61YLR378C GSY1P23337 708 aa10.24□□□□□ -0.77
SEC61YLR378C MCM2P29469 868 aa10.24□□□□□ -0.77
SEC61YLR378C HIR1P32479 840 aa10.24□□□□□ -0.77
SEC61YLR378C UBA2P52488 636 aa10.24□□□□□ -0.77
SEC61YLR378C GIN4Q12263 1142 aa10.24□□□□□ -0.77
SEC61YLR378C OCT1P35999 772 aa10.23□□□□□ -0.77
SEC61YLR378C ADE17P38009 592 aaKnown RBP10.23□□□□□ -0.77
SEC61YLR378C DMA1P38823 416 aa10.23□□□□□ -0.77
SEC61YLR378C ATG32P40458 529 aa10.23□□□□□ -0.77
SEC61YLR378C VTC2P43585 828 aa10.23□□□□□ -0.77
SEC61YLR378C CIT3P43635 486 aa10.23□□□□□ -0.77
SEC61YLR378C YGR153WP48238 217 aa10.23□□□□□ -0.77
SEC61YLR378C FMS1P50264 508 aa10.23□□□□□ -0.77
SEC61YLR378C GFD1Q04839 188 aaKnown RBP10.23□□□□□ -0.77
SEC61YLR378C FOB1O13329 566 aa10.22□□□□□ -0.77
SEC61YLR378C CKA2P19454 339 aa10.22□□□□□ -0.77
SEC61YLR378C PAN5P38787 379 aa10.22□□□□□ -0.77
SEC61YLR378C ORC6P38826 435 aa10.22□□□□□ -0.77
SEC61YLR378C THI6P41835 540 aa10.22□□□□□ -0.77
SEC61YLR378C WAR1Q03631 944 aa10.22□□□□□ -0.77
SEC61YLR378C YML037CQ03703 340 aa10.22□□□□□ -0.77
SEC61YLR378C BUL2Q03758 920 aaKnown RBP10.22□□□□□ -0.77
SEC61YLR378C OXR1Q08952 273 aa10.22□□□□□ -0.77
SEC61YLR378C SMC6Q12749 1114 aa10.22□□□□□ -0.77
SEC61YLR378C SUL1P38359 859 aa10.21□□□□□ -0.78
SEC61YLR378C MFM1Q02783 413 aa10.21□□□□□ -0.78
SEC61YLR378C YLH47Q06493 454 aa10.21□□□□□ -0.78
SEC61YLR378C RAD18P10862 487 aa10.2□□□□□ -0.78
SEC61YLR378C CYC8P14922 966 aa10.2□□□□□ -0.78
SEC61YLR378C PER1P25625 357 aa10.2□□□□□ -0.78
SEC61YLR378C GAA1P39012 614 aa10.2□□□□□ -0.78
SEC61YLR378C VAB2P40003 282 aa10.2□□□□□ -0.78
SEC61YLR378C VHR2P40041 505 aa10.2□□□□□ -0.78
SEC61YLR378C YGR273CP53329 174 aa10.2□□□□□ -0.78
SEC61YLR378C CBK1P53894 756 aa10.2□□□□□ -0.78
SEC61YLR378C AIM33Q04516 312 aa10.2□□□□□ -0.78
SEC61YLR378C PUS5Q06244 254 aa10.2□□□□□ -0.78
SEC61YLR378C TLG2Q08144 397 aa10.2□□□□□ -0.78
SEC61YLR378C AFT2Q08957 416 aa10.2□□□□□ -0.78
SEC61YLR378C SAP190P36123 1033 aa10.19□□□□□ -0.78
SEC61YLR378C PHO88P38264 188 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms