RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C UTP5Q04177 643 aaKnown RBP7.59□□□□□ -1.19
NMD4YLR363C MYO2P19524 1574 aaKnown RBP7.59□□□□□ -1.2
NMD4YLR363C SCC2Q04002 1493 aa7.58□□□□□ -1.2
NMD4YLR363C PIC2P40035 300 aa7.58□□□□□ -1.2
NMD4YLR363C FYV10P40492 516 aa7.58□□□□□ -1.2
NMD4YLR363C YGL140CP53120 1219 aa7.58□□□□□ -1.2
NMD4YLR363C ELA1P53861 379 aaPredicted RBP7.57□□□□□ -1.2
NMD4YLR363C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
NMD4YLR363C SEC23P15303 768 aaKnown RBP7.56□□□□□ -1.2
NMD4YLR363C MSB1P21339 1137 aaKnown RBP7.56□□□□□ -1.2
NMD4YLR363C RDH54P38086 958 aa7.56□□□□□ -1.2
NMD4YLR363C ATG14P38270 344 aa7.56□□□□□ -1.2
NMD4YLR363C MSH4P40965 878 aaPredicted RBP7.56□□□□□ -1.2
NMD4YLR363C OYE2Q03558 400 aaKnown RBP7.56□□□□□ -1.2
NMD4YLR363C SPR28Q04921 423 aa7.56□□□□□ -1.2
NMD4YLR363C RPO31P04051 1460 aa7.55□□□□□ -1.2
NMD4YLR363C TAF13P11747 167 aa7.55□□□□□ -1.2
NMD4YLR363C NNK1P36003 928 aa7.55□□□□□ -1.2
NMD4YLR363C YAR028WP39548 234 aa7.55□□□□□ -1.2
NMD4YLR363C XKS1P42826 600 aa7.55□□□□□ -1.2
NMD4YLR363C SPO74P45819 413 aa7.55□□□□□ -1.2
NMD4YLR363C ESF1Q06344 628 aaKnown RBP7.55□□□□□ -1.2
NMD4YLR363C MMM1P41800 426 aa7.54□□□□□ -1.2
NMD4YLR363C RMD1Q03441 430 aa7.54□□□□□ -1.2
NMD4YLR363C MED7Q08278 222 aa7.54□□□□□ -1.2
NMD4YLR363C LAP2Q10740 671 aa7.54□□□□□ -1.2
NMD4YLR363C RPS4AP0CX35 261 aaKnown RBP7.53□□□□□ -1.2
NMD4YLR363C RPS4BP0CX36 261 aaKnown RBP7.53□□□□□ -1.2
NMD4YLR363C PEP7P32609 515 aa7.53□□□□□ -1.2
NMD4YLR363C SMY2P32909 740 aaKnown RBP7.53□□□□□ -1.2
NMD4YLR363C HSE1P38753 452 aa7.53□□□□□ -1.2
NMD4YLR363C YGR130CP53278 816 aa7.53□□□□□ -1.2
NMD4YLR363C CHD1P32657 1468 aa7.53□□□□□ -1.2
NMD4YLR363C HEM13P11353 328 aaKnown RBP7.52□□□□□ -1.21
NMD4YLR363C NFS1P25374 497 aa7.52□□□□□ -1.21
NMD4YLR363C ADD66P36040 267 aa7.52□□□□□ -1.21
NMD4YLR363C CIT3P43635 486 aa7.52□□□□□ -1.21
NMD4YLR363C ALT1P52893 592 aa7.52□□□□□ -1.21
NMD4YLR363C RKM2Q03942 479 aa7.52□□□□□ -1.21
NMD4YLR363C YOR059CQ08448 450 aaKnown RBP7.52□□□□□ -1.21
NMD4YLR363C TRP3P00937 484 aa7.51□□□□□ -1.21
NMD4YLR363C ALO1P54783 526 aaKnown RBP7.51□□□□□ -1.21
NMD4YLR363C EST2Q06163 884 aa7.51□□□□□ -1.21
NMD4YLR363C MET5P47169 1442 aa7.51□□□□□ -1.21
NMD4YLR363C WHI3P34761 661 aaKnown RBP7.5□□□□□ -1.21
NMD4YLR363C YNR063WP53749 607 aa7.49□□□□□ -1.21
NMD4YLR363C NSI1Q12457 570 aa7.49□□□□□ -1.21
NMD4YLR363C CDC25P04821 1589 aa7.49□□□□□ -1.21
NMD4YLR363C CYC7P00045 113 aa7.48□□□□□ -1.21
NMD4YLR363C RET1P22276 1149 aaKnown RBP7.48□□□□□ -1.21
NMD4YLR363C YKR073CP36153 106 aa7.48□□□□□ -1.21
NMD4YLR363C OMA1P36163 345 aa7.48□□□□□ -1.21
NMD4YLR363C RCM1P53972 490 aa7.48□□□□□ -1.21
NMD4YLR363C HDA2Q06629 674 aa7.48□□□□□ -1.21
NMD4YLR363C TOS1P38288 455 aa7.47□□□□□ -1.21
NMD4YLR363C ENT3P47160 408 aa7.47□□□□□ -1.21
NMD4YLR363C RSA3Q05942 220 aaKnown RBP7.47□□□□□ -1.21
NMD4YLR363C YLR257WQ06146 321 aaKnown RBP7.47□□□□□ -1.21
NMD4YLR363C MRL1Q06815 381 aa7.47□□□□□ -1.21
NMD4YLR363C MAC1P35192 417 aa7.46□□□□□ -1.22
NMD4YLR363C VPS53P47061 822 aa7.46□□□□□ -1.22
NMD4YLR363C SIW14P53965 281 aa7.46□□□□□ -1.22
NMD4YLR363C EAR1Q03212 550 aa7.46□□□□□ -1.22
NMD4YLR363C GCR1P07261 785 aa7.45□□□□□ -1.22
NMD4YLR363C INP52P50942 1183 aa7.45□□□□□ -1.22
NMD4YLR363C PUS7Q08647 676 aaKnown RBP7.45□□□□□ -1.22
NMD4YLR363C HRK1Q08732 759 aaKnown RBP7.45□□□□□ -1.22
NMD4YLR363C TOP2P06786 1428 aaKnown RBP7.44□□□□□ -1.22
NMD4YLR363C PAN1P32521 1480 aa7.44□□□□□ -1.22
NMD4YLR363C DED1P06634 604 aaKnown RBP7.44□□□□□ -1.22
NMD4YLR363C QNS1P38795 714 aaKnown RBP7.44□□□□□ -1.22
NMD4YLR363C GNP1P48813 663 aa7.44□□□□□ -1.22
NMD4YLR363C TPP1Q03796 238 aa7.44□□□□□ -1.22
NMD4YLR363C YVC1Q12324 675 aa7.44□□□□□ -1.22
NMD4YLR363C LTE1P07866 1435 aa7.44□□□□□ -1.22
NMD4YLR363C DNF1P32660 1571 aa7.43□□□□□ -1.22
NMD4YLR363C PUB1P32588 453 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
NMD4YLR363C SNU71P53207 620 aaKnown RBP7.43□□□□□ -1.22
NMD4YLR363C ROD1Q02805 837 aa7.43□□□□□ -1.22
NMD4YLR363C RTT10Q08924 1013 aa7.43□□□□□ -1.22
NMD4YLR363C RAD27P26793 382 aa7.42□□□□□ -1.22
NMD4YLR363C AFG2P32794 780 aa7.42□□□□□ -1.22
NMD4YLR363C PET112P33893 541 aa7.42□□□□□ -1.22
NMD4YLR363C OYE3P41816 400 aaPredicted RBP7.42□□□□□ -1.22
NMD4YLR363C SVF1Q05515 481 aa7.42□□□□□ -1.22
NMD4YLR363C GCD1P09032 578 aaPredicted RBP7.41□□□□□ -1.22
NMD4YLR363C LIP5P32875 414 aa7.41□□□□□ -1.22
NMD4YLR363C MNR2P35724 969 aa7.41□□□□□ -1.22
NMD4YLR363C HXT13P39924 564 aa7.41□□□□□ -1.22
NMD4YLR363C HXT17P53631 564 aa7.41□□□□□ -1.22
NMD4YLR363C HXT15P54854 567 aa7.41□□□□□ -1.22
NMD4YLR363C BRE4Q07660 1125 aa7.41□□□□□ -1.22
NMD4YLR363C PTC5Q12511 572 aa7.41□□□□□ -1.22
NMD4YLR363C RKR1Q04781 1562 aa7.41□□□□□ -1.22
NMD4YLR363C NAP1P25293 417 aaKnown RBP7.4□□□□□ -1.22
NMD4YLR363C MKK2P32491 506 aa7.4□□□□□ -1.22
NMD4YLR363C MAG2Q06436 670 aaKnown RBP7.4□□□□□ -1.22
NMD4YLR363C TRE1Q08919 783 aa7.4□□□□□ -1.22
NMD4YLR363C ESC1Q03661 1658 aaKnown RBP7.39□□□□□ -1.23
NMD4YLR363C ALG3P38179 458 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms