RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W MMM1P41800 426 aa5.53□□□□□ -1.52
VPS38YLR360W ALO1P54783 526 aaKnown RBP5.53□□□□□ -1.52
VPS38YLR360W EST2Q06163 884 aa5.53□□□□□ -1.52
VPS38YLR360W SMY2P32909 740 aaKnown RBP5.52□□□□□ -1.53
VPS38YLR360W NNK1P36003 928 aa5.52□□□□□ -1.53
VPS38YLR360W HSE1P38753 452 aa5.52□□□□□ -1.53
VPS38YLR360W HDA2Q06629 674 aa5.52□□□□□ -1.53
VPS38YLR360W TRP3P00937 484 aa5.51□□□□□ -1.53
VPS38YLR360W GCR1P07261 785 aa5.51□□□□□ -1.53
VPS38YLR360W NMD3P38861 518 aaKnown RBP5.51□□□□□ -1.53
VPS38YLR360W SNU71P53207 620 aaKnown RBP5.51□□□□□ -1.53
VPS38YLR360W RMD1Q03441 430 aa5.51□□□□□ -1.53
VPS38YLR360W CYC7P00045 113 aa5.5□□□□□ -1.53
VPS38YLR360W MSB1P21339 1137 aaKnown RBP5.5□□□□□ -1.53
VPS38YLR360W RET1P22276 1149 aaKnown RBP5.5□□□□□ -1.53
VPS38YLR360W PET112P33893 541 aa5.5□□□□□ -1.53
VPS38YLR360W CIT3P43635 486 aa5.5□□□□□ -1.53
VPS38YLR360W MED7Q08278 222 aa5.5□□□□□ -1.53
VPS38YLR360W TAF13P11747 167 aa5.49□□□□□ -1.53
VPS38YLR360W ALT1P52893 592 aa5.49□□□□□ -1.53
VPS38YLR360W RCM1P53972 490 aa5.49□□□□□ -1.53
VPS38YLR360W EAR1Q03212 550 aa5.49□□□□□ -1.53
VPS38YLR360W TPP1Q03796 238 aa5.49□□□□□ -1.53
VPS38YLR360W YLR257WQ06146 321 aaKnown RBP5.49□□□□□ -1.53
VPS38YLR360W NSI1Q12457 570 aa5.49□□□□□ -1.53
VPS38YLR360W RAD27P26793 382 aa5.48□□□□□ -1.53
VPS38YLR360W OMA1P36163 345 aa5.48□□□□□ -1.53
VPS38YLR360W ROD1Q02805 837 aa5.48□□□□□ -1.53
VPS38YLR360W RKM2Q03942 479 aa5.48□□□□□ -1.53
VPS38YLR360W YOR059CQ08448 450 aaKnown RBP5.48□□□□□ -1.53
VPS38YLR360W YKR073CP36153 106 aa5.48□□□□□ -1.53
VPS38YLR360W TOS1P38288 455 aa5.48□□□□□ -1.53
VPS38YLR360W RSA3Q05942 220 aaKnown RBP5.48□□□□□ -1.53
VPS38YLR360W JIP5Q06214 492 aaPredicted RBP5.48□□□□□ -1.53
VPS38YLR360W PUS7Q08647 676 aaKnown RBP5.48□□□□□ -1.53
VPS38YLR360W MAC1P35192 417 aa5.47□□□□□ -1.53
VPS38YLR360W QNS1P38795 714 aaKnown RBP5.47□□□□□ -1.53
VPS38YLR360W VPS53P47061 822 aa5.47□□□□□ -1.53
VPS38YLR360W SIW14P53965 281 aa5.47□□□□□ -1.53
VPS38YLR360W RAT1Q02792 1006 aaKnown RBP5.47□□□□□ -1.53
VPS38YLR360W RTT10Q08924 1013 aa5.47□□□□□ -1.53
VPS38YLR360W PTC5Q12511 572 aa5.47□□□□□ -1.53
VPS38YLR360W MKK2P32491 506 aa5.46□□□□□ -1.54
VPS38YLR360W AFG2P32794 780 aa5.46□□□□□ -1.54
VPS38YLR360W LIP5P32875 414 aa5.46□□□□□ -1.54
VPS38YLR360W YVC1Q12324 675 aa5.46□□□□□ -1.54
VPS38YLR360W GCD1P09032 578 aaPredicted RBP5.45□□□□□ -1.54
VPS38YLR360W MNR2P35724 969 aa5.45□□□□□ -1.54
VPS38YLR360W ALG3P38179 458 aa5.45□□□□□ -1.54
VPS38YLR360W MAD1P40957 749 aa5.45□□□□□ -1.54
VPS38YLR360W GNP1P48813 663 aa5.45□□□□□ -1.54
VPS38YLR360W SVF1Q05515 481 aa5.45□□□□□ -1.54
VPS38YLR360W HRK1Q08732 759 aaKnown RBP5.45□□□□□ -1.54
VPS38YLR360W NAP1P25293 417 aaKnown RBP5.44□□□□□ -1.54
VPS38YLR360W HXT13P39924 564 aa5.44□□□□□ -1.54
VPS38YLR360W YJL045WP47052 634 aa5.44□□□□□ -1.54
VPS38YLR360W HXT17P53631 564 aa5.44□□□□□ -1.54
VPS38YLR360W HXT15P54854 567 aa5.44□□□□□ -1.54
VPS38YLR360W SDH1Q00711 640 aa5.44□□□□□ -1.54
VPS38YLR360W TRE1Q08919 783 aa5.44□□□□□ -1.54
VPS38YLR360W TMA46Q12000 345 aaKnown RBP5.44□□□□□ -1.54
VPS38YLR360W CDC34P14682 295 aa5.43□□□□□ -1.54
VPS38YLR360W SYP1P25623 870 aaKnown RBP5.43□□□□□ -1.54
VPS38YLR360W KIP1P28742 1111 aa5.43□□□□□ -1.54
VPS38YLR360W RER2P35196 286 aa5.43□□□□□ -1.54
VPS38YLR360W GPB2P39717 880 aa5.43□□□□□ -1.54
VPS38YLR360W OYE3P41816 400 aaPredicted RBP5.43□□□□□ -1.54
VPS38YLR360W ENT3P47160 408 aa5.43□□□□□ -1.54
VPS38YLR360W CWC24P53769 259 aa5.43□□□□□ -1.54
VPS38YLR360W CLN2P20438 545 aa5.42□□□□□ -1.54
VPS38YLR360W PRO1P32264 428 aa5.42□□□□□ -1.54
VPS38YLR360W PUB1P32588 453 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
VPS38YLR360W INP52P50942 1183 aa5.42□□□□□ -1.54
VPS38YLR360W BRE4Q07660 1125 aa5.42□□□□□ -1.54
VPS38YLR360W DUT1P33317 147 aa5.41□□□□□ -1.54
VPS38YLR360W YHL012WP38709 493 aa5.41□□□□□ -1.54
VPS38YLR360W MAG2Q06436 670 aaKnown RBP5.41□□□□□ -1.54
VPS38YLR360W ADP1P25371 1049 aa5.4□□□□□ -1.55
VPS38YLR360W MLS1P30952 554 aa5.4□□□□□ -1.55
VPS38YLR360W MCM7P38132 845 aa5.4□□□□□ -1.55
VPS38YLR360W PTC7P38797 343 aa5.4□□□□□ -1.55
VPS38YLR360W PEX7P39108 375 aa5.4□□□□□ -1.55
VPS38YLR360W CNN1P43618 361 aa5.4□□□□□ -1.55
VPS38YLR360W GDE1Q02979 1223 aa5.4□□□□□ -1.55
VPS38YLR360W SSY1Q03770 852 aa5.4□□□□□ -1.55
VPS38YLR360W SPO21Q12411 609 aa5.4□□□□□ -1.55
VPS38YLR360W DBP5P20449 482 aaKnown RBP5.39□□□□□ -1.55
VPS38YLR360W YSC84P32793 468 aa5.39□□□□□ -1.55
VPS38YLR360W PAM1P37304 830 aaKnown RBP5.39□□□□□ -1.55
VPS38YLR360W GTS1P40956 396 aa5.39□□□□□ -1.55
VPS38YLR360W CTH1P47976 325 aa5.39□□□□□ -1.55
VPS38YLR360W NOP7P53261 605 aaKnown RBP5.39□□□□□ -1.55
VPS38YLR360W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
VPS38YLR360W YPL260WQ08977 551 aa5.39□□□□□ -1.55
VPS38YLR360W RGD1P38339 666 aa5.38□□□□□ -1.55
VPS38YLR360W MET10P39692 1035 aa5.38□□□□□ -1.55
VPS38YLR360W FAA4P47912 694 aaKnown RBP5.38□□□□□ -1.55
VPS38YLR360W TYW3P53177 273 aa5.38□□□□□ -1.55
VPS38YLR360W VPS16Q03308 798 aa5.38□□□□□ -1.55
VPS38YLR360W TIF35Q04067 274 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms