RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeastyeast

Gene CDA2, Length 939 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA2YLR308W DED1P06634 604 aaKnown RBP7□□□□□ -1.29
CDA2YLR308W VMA4P22203 233 aaKnown RBP7□□□□□ -1.29
CDA2YLR308W NFS1P25374 497 aa7□□□□□ -1.29
CDA2YLR308W PEP7P32609 515 aa7□□□□□ -1.29
CDA2YLR308W RDH54P38086 958 aa7□□□□□ -1.29
CDA2YLR308W MCD1Q12158 566 aa7□□□□□ -1.29
CDA2YLR308W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
CDA2YLR308W SEC23P15303 768 aaKnown RBP6.99□□□□□ -1.29
CDA2YLR308W MSB1P21339 1137 aaKnown RBP6.99□□□□□ -1.29
CDA2YLR308W ALT1P52893 592 aa6.99□□□□□ -1.29
CDA2YLR308W SMY2P32909 740 aaKnown RBP6.98□□□□□ -1.29
CDA2YLR308W SDH1Q00711 640 aa6.98□□□□□ -1.29
CDA2YLR308W GCD1P09032 578 aaPredicted RBP6.97□□□□□ -1.29
CDA2YLR308W PUB1P32588 453 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
CDA2YLR308W ATG14P38270 344 aa6.97□□□□□ -1.29
CDA2YLR308W IRC24P40580 263 aa6.97□□□□□ -1.29
CDA2YLR308W CIT3P43635 486 aa6.97□□□□□ -1.29
CDA2YLR308W AVT1P47082 602 aa6.97□□□□□ -1.29
CDA2YLR308W NNK1P36003 928 aa6.96□□□□□ -1.3
CDA2YLR308W HDA2Q06629 674 aa6.96□□□□□ -1.3
CDA2YLR308W BRE4Q07660 1125 aa6.96□□□□□ -1.3
CDA2YLR308W RET1P22276 1149 aaKnown RBP6.95□□□□□ -1.3
CDA2YLR308W ADD66P36040 267 aa6.95□□□□□ -1.3
CDA2YLR308W SEA4P38164 1038 aa6.95□□□□□ -1.3
CDA2YLR308W CTH1P47976 325 aa6.95□□□□□ -1.3
CDA2YLR308W RCM1P53972 490 aa6.95□□□□□ -1.3
CDA2YLR308W YLR257WQ06146 321 aaKnown RBP6.95□□□□□ -1.3
CDA2YLR308W EST2Q06163 884 aa6.95□□□□□ -1.3
CDA2YLR308W MRL1Q06815 381 aa6.95□□□□□ -1.3
CDA2YLR308W SNU71P53207 620 aaKnown RBP6.94□□□□□ -1.3
CDA2YLR308W ROD1Q02805 837 aa6.94□□□□□ -1.3
CDA2YLR308W TPP1Q03796 238 aa6.94□□□□□ -1.3
CDA2YLR308W RSA3Q05942 220 aaKnown RBP6.94□□□□□ -1.3
CDA2YLR308W ESF1Q06344 628 aaKnown RBP6.94□□□□□ -1.3
CDA2YLR308W GCR1P07261 785 aa6.93□□□□□ -1.3
CDA2YLR308W OYE3P41816 400 aaPredicted RBP6.93□□□□□ -1.3
CDA2YLR308W PUS7Q08647 676 aaKnown RBP6.93□□□□□ -1.3
CDA2YLR308W LAP2Q10740 671 aa6.93□□□□□ -1.3
CDA2YLR308W YVC1Q12324 675 aa6.93□□□□□ -1.3
CDA2YLR308W AFG2P32794 780 aa6.92□□□□□ -1.3
CDA2YLR308W NOP7P53261 605 aaKnown RBP6.92□□□□□ -1.3
CDA2YLR308W MAG2Q06436 670 aaKnown RBP6.92□□□□□ -1.3
CDA2YLR308W HSE1P38753 452 aa6.91□□□□□ -1.3
CDA2YLR308W RAT1Q02792 1006 aaKnown RBP6.91□□□□□ -1.3
CDA2YLR308W QNS1P38795 714 aaKnown RBP6.9□□□□□ -1.3
CDA2YLR308W GNP1P48813 663 aa6.9□□□□□ -1.3
CDA2YLR308W RKM2Q03942 479 aa6.9□□□□□ -1.3
CDA2YLR308W YOR059CQ08448 450 aaKnown RBP6.9□□□□□ -1.3
CDA2YLR308W YJL045WP47052 634 aa6.89□□□□□ -1.31
CDA2YLR308W NSI1Q12457 570 aa6.89□□□□□ -1.31
CDA2YLR308W ALG3P38179 458 aa6.88□□□□□ -1.31
CDA2YLR308W HXT13P39924 564 aa6.88□□□□□ -1.31
CDA2YLR308W HXT17P53631 564 aa6.88□□□□□ -1.31
CDA2YLR308W SIW14P53965 281 aa6.88□□□□□ -1.31
CDA2YLR308W HXT15P54854 567 aa6.88□□□□□ -1.31
CDA2YLR308W PTC5Q12511 572 aa6.88□□□□□ -1.31
CDA2YLR308W MKK2P32491 506 aa6.87□□□□□ -1.31
CDA2YLR308W GPB2P39717 880 aa6.87□□□□□ -1.31
CDA2YLR308W TRE1Q08919 783 aa6.87□□□□□ -1.31
CDA2YLR308W TAF13P11747 167 aa6.86□□□□□ -1.31
CDA2YLR308W PRO1P32264 428 aa6.86□□□□□ -1.31
CDA2YLR308W PET112P33893 541 aa6.86□□□□□ -1.31
CDA2YLR308W PEX7P39108 375 aa6.86□□□□□ -1.31
CDA2YLR308W SSY1Q03770 852 aa6.86□□□□□ -1.31
CDA2YLR308W HRK1Q08732 759 aaKnown RBP6.86□□□□□ -1.31
CDA2YLR308W KIP1P28742 1111 aa6.85□□□□□ -1.31
CDA2YLR308W PTC7P38797 343 aa6.85□□□□□ -1.31
CDA2YLR308W VPS53P47061 822 aa6.85□□□□□ -1.31
CDA2YLR308W RMD1Q03441 430 aa6.85□□□□□ -1.31
CDA2YLR308W GTS1P40956 396 aa6.84□□□□□ -1.31
CDA2YLR308W YHL012WP38709 493 aa6.83□□□□□ -1.32
CDA2YLR308W RTT10Q08924 1013 aa6.83□□□□□ -1.32
CDA2YLR308W SAM35P14693 329 aa6.82□□□□□ -1.32
CDA2YLR308W NAP1P25293 417 aaKnown RBP6.82□□□□□ -1.32
CDA2YLR308W ADP1P25371 1049 aa6.82□□□□□ -1.32
CDA2YLR308W DUT1P33317 147 aa6.82□□□□□ -1.32
CDA2YLR308W AOS1Q06624 347 aa6.82□□□□□ -1.32
CDA2YLR308W SYP1P25623 870 aaKnown RBP6.81□□□□□ -1.32
CDA2YLR308W HSP78P33416 811 aa6.81□□□□□ -1.32
CDA2YLR308W RER2P35196 286 aa6.81□□□□□ -1.32
CDA2YLR308W CDC34P14682 295 aa6.8□□□□□ -1.32
CDA2YLR308W RAD27P26793 382 aa6.8□□□□□ -1.32
CDA2YLR308W YSC84P32793 468 aa6.8□□□□□ -1.32
CDA2YLR308W LRG1P35688 1017 aa6.8□□□□□ -1.32
CDA2YLR308W POL12P38121 705 aaPredicted RBP6.8□□□□□ -1.32
CDA2YLR308W RCL1Q08096 367 aaPredicted RBP6.8□□□□□ -1.32
CDA2YLR308W SPO21Q12411 609 aa6.8□□□□□ -1.32
CDA2YLR308W MLS1P30952 554 aa6.79□□□□□ -1.32
CDA2YLR308W ELM1P32801 640 aa6.79□□□□□ -1.32
CDA2YLR308W SVF1Q05515 481 aa6.79□□□□□ -1.32
CDA2YLR308W JIP5Q06214 492 aaPredicted RBP6.79□□□□□ -1.32
CDA2YLR308W CNN1P43618 361 aa6.78□□□□□ -1.32
CDA2YLR308W ENT3P47160 408 aa6.78□□□□□ -1.32
CDA2YLR308W EEB1Q02891 456 aa6.78□□□□□ -1.32
CDA2YLR308W TIF35Q04067 274 aaKnown RBP6.78□□□□□ -1.32
CDA2YLR308W LPX1Q12405 387 aaKnown RBP6.78□□□□□ -1.32
CDA2YLR308W DBP5P20449 482 aaKnown RBP6.77□□□□□ -1.33
CDA2YLR308W AIM26P32858 118 aa6.77□□□□□ -1.33
CDA2YLR308W MCM7P38132 845 aa6.77□□□□□ -1.33
CDA2YLR308W YFL054CP43549 646 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms