RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YOR059CQ08448 450 aaKnown RBP6.1□□□□□ -1.43
SMD2YLR275W GLT1Q12680 2145 aaKnown RBP6.1□□□□□ -1.43
SMD2YLR275W SEC23P15303 768 aaKnown RBP6.09□□□□□ -1.43
SMD2YLR275W FYV10P40492 516 aa6.09□□□□□ -1.43
SMD2YLR275W NRD1P53617 575 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43 RIP-Chip
SMD2YLR275W HEM13P11353 328 aaKnown RBP6.08□□□□□ -1.44
SMD2YLR275W RCM1P53972 490 aa6.08□□□□□ -1.44
SMD2YLR275W SPR28Q04921 423 aa6.08□□□□□ -1.44
SMD2YLR275W LAP2Q10740 671 aa6.08□□□□□ -1.44
SMD2YLR275W NSI1Q12457 570 aa6.08□□□□□ -1.44
SMD2YLR275W PUB1P32588 453 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44 RIP-Chip
SMD2YLR275W SEC8P32855 1065 aa6.07□□□□□ -1.44
SMD2YLR275W LIP5P32875 414 aa6.07□□□□□ -1.44
SMD2YLR275W HSE1P38753 452 aa6.07□□□□□ -1.44
SMD2YLR275W TAF13P11747 167 aa6.06□□□□□ -1.44
SMD2YLR275W ADD66P36040 267 aa6.06□□□□□ -1.44
SMD2YLR275W YNR063WP53749 607 aa6.06□□□□□ -1.44
SMD2YLR275W EAR1Q03212 550 aa6.06□□□□□ -1.44
SMD2YLR275W RKM2Q03942 479 aa6.06□□□□□ -1.44
SMD2YLR275W GCD1P09032 578 aaPredicted RBP6.05□□□□□ -1.44
SMD2YLR275W OYE2Q03558 400 aaKnown RBP6.05□□□□□ -1.44
SMD2YLR275W EST2Q06163 884 aa6.05□□□□□ -1.44
SMD2YLR275W ESF1Q06344 628 aaKnown RBP6.05□□□□□ -1.44
SMD2YLR275W MAG2Q06436 670 aaKnown RBP6.05□□□□□ -1.44
SMD2YLR275W BRE4Q07660 1125 aa6.05□□□□□ -1.44
SMD2YLR275W RET1P22276 1149 aaKnown RBP6.04□□□□□ -1.44
SMD2YLR275W OYE3P41816 400 aaPredicted RBP6.04□□□□□ -1.44
SMD2YLR275W CTH1P47976 325 aa6.04□□□□□ -1.44
SMD2YLR275W TPP1Q03796 238 aa6.04□□□□□ -1.44
SMD2YLR275W RSA3Q05942 220 aaKnown RBP6.04□□□□□ -1.44
SMD2YLR275W YLR257WQ06146 321 aaKnown RBP6.04□□□□□ -1.44
SMD2YLR275W PUS7Q08647 676 aaKnown RBP6.04□□□□□ -1.44
SMD2YLR275W YVC1Q12324 675 aa6.04□□□□□ -1.44
SMD2YLR275W PEP7P32609 515 aa6.03□□□□□ -1.44
SMD2YLR275W SDH1Q00711 640 aa6.03□□□□□ -1.44
SMD2YLR275W HDA2Q06629 674 aa6.03□□□□□ -1.44
SMD2YLR275W DED1P06634 604 aaKnown RBP6.02□□□□□ -1.45
SMD2YLR275W RMD1Q03441 430 aa6.02□□□□□ -1.45
SMD2YLR275W HRK1Q08732 759 aaKnown RBP6.02□□□□□ -1.45
SMD2YLR275W QNS1P38795 714 aaKnown RBP6.01□□□□□ -1.45
SMD2YLR275W NMD3P38861 518 aaKnown RBP6.01□□□□□ -1.45
SMD2YLR275W VPS53P47061 822 aa6.01□□□□□ -1.45
SMD2YLR275W MRL1Q06815 381 aa6.01□□□□□ -1.45
SMD2YLR275W TRE1Q08919 783 aa6.01□□□□□ -1.45
SMD2YLR275W AFG2P32794 780 aa6□□□□□ -1.45
SMD2YLR275W ENT3P47160 408 aa6□□□□□ -1.45
SMD2YLR275W SIW14P53965 281 aa6□□□□□ -1.45
SMD2YLR275W GCR1P07261 785 aa5.99□□□□□ -1.45
SMD2YLR275W SEA4P38164 1038 aa5.99□□□□□ -1.45
SMD2YLR275W GNP1P48813 663 aa5.99□□□□□ -1.45
SMD2YLR275W ROD1Q02805 837 aa5.99□□□□□ -1.45
SMD2YLR275W PEX7P39108 375 aa5.98□□□□□ -1.45
SMD2YLR275W YJL045WP47052 634 aa5.98□□□□□ -1.45
SMD2YLR275W PTC5Q12511 572 aa5.98□□□□□ -1.45
SMD2YLR275W ADP1P25371 1049 aa5.97□□□□□ -1.45
SMD2YLR275W PRO1P32264 428 aa5.97□□□□□ -1.45
SMD2YLR275W MKK2P32491 506 aa5.97□□□□□ -1.45
SMD2YLR275W ALG3P38179 458 aa5.97□□□□□ -1.45
SMD2YLR275W YHL012WP38709 493 aa5.97□□□□□ -1.45
SMD2YLR275W HXT13P39924 564 aa5.97□□□□□ -1.45
SMD2YLR275W HXT17P53631 564 aa5.97□□□□□ -1.45
SMD2YLR275W HXT15P54854 567 aa5.97□□□□□ -1.45
SMD2YLR275W SSY1Q03770 852 aa5.97□□□□□ -1.45
SMD2YLR275W RAT1Q02792 1006 aaKnown RBP5.96□□□□□ -1.46
SMD2YLR275W SAM35P14693 329 aa5.95□□□□□ -1.46
SMD2YLR275W KIP1P28742 1111 aa5.95□□□□□ -1.46
SMD2YLR275W PET112P33893 541 aa5.95□□□□□ -1.46
SMD2YLR275W PTC7P38797 343 aa5.95□□□□□ -1.46
SMD2YLR275W RTT10Q08924 1013 aa5.95□□□□□ -1.46
SMD2YLR275W RAD27P26793 382 aa5.94□□□□□ -1.46
SMD2YLR275W MDL2P33311 773 aa5.94□□□□□ -1.46
SMD2YLR275W HSP78P33416 811 aa5.94□□□□□ -1.46
SMD2YLR275W GTS1P40956 396 aa5.94□□□□□ -1.46
SMD2YLR275W SYP1P25623 870 aaKnown RBP5.93□□□□□ -1.46
SMD2YLR275W YSC84P32793 468 aa5.93□□□□□ -1.46
SMD2YLR275W POL12P38121 705 aaPredicted RBP5.93□□□□□ -1.46
SMD2YLR275W YPL260WQ08977 551 aa5.93□□□□□ -1.46
SMD2YLR275W SRO9P25567 434 aaKnown RBP5.92□□□□□ -1.46
SMD2YLR275W GPB2P39717 880 aa5.92□□□□□ -1.46
SMD2YLR275W CNN1P43618 361 aa5.92□□□□□ -1.46
SMD2YLR275W ORC3P54790 616 aa5.92□□□□□ -1.46
SMD2YLR275W TMA46Q12000 345 aaKnown RBP5.92□□□□□ -1.46
SMD2YLR275W LPX1Q12405 387 aaKnown RBP5.92□□□□□ -1.46
SMD2YLR275W MNR2P35724 969 aa5.91□□□□□ -1.46
SMD2YLR275W RGD1P38339 666 aa5.91□□□□□ -1.46
SMD2YLR275W SPO21Q12411 609 aa5.91□□□□□ -1.46
SMD2YLR275W DFG16Q99234 619 aa5.91□□□□□ -1.46
SMD2YLR275W COQ4O13525 335 aa5.9□□□□□ -1.46
SMD2YLR275W CDC34P14682 295 aa5.9□□□□□ -1.46
SMD2YLR275W DBP5P20449 482 aaKnown RBP5.9□□□□□ -1.46
SMD2YLR275W DUT1P33317 147 aa5.9□□□□□ -1.46
SMD2YLR275W RER2P35196 286 aa5.9□□□□□ -1.46
SMD2YLR275W LRG1P35688 1017 aa5.9□□□□□ -1.46
SMD2YLR275W AVT1P47082 602 aa5.9□□□□□ -1.46
SMD2YLR275W HOS3Q02959 697 aaKnown RBP5.9□□□□□ -1.46
SMD2YLR275W RPN3P40016 523 aaKnown RBP5.89□□□□□ -1.47
SMD2YLR275W ECL1P48235 211 aa5.89□□□□□ -1.47
SMD2YLR275W TNA1P53322 534 aa5.89□□□□□ -1.47
SMD2YLR275W NBA1Q08229 501 aaKnown RBP5.89□□□□□ -1.47
SMD2YLR275W NAP1P25293 417 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms