RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YGR130C	P53278	816 aa		7.71	□□□□□ -1.18
RSA3	YLR221C	SIW14	P53965	281 aa		7.71	□□□□□ -1.18
RSA3	YLR221C	TDA5	Q06417	326 aa	Known RBP	7.71	□□□□□ -1.18
RSA3	YLR221C	HDA2	Q06629	674 aa		7.71	□□□□□ -1.18
RSA3	YLR221C	FAL1	Q12099	399 aa	Known RBP	7.71	□□□□□ -1.18
RSA3	YLR221C	MAE1	P36013	669 aa	Known RBP	7.7	□□□□□ -1.18
RSA3	YLR221C	EXO5	P38289	585 aa		7.7	□□□□□ -1.18
RSA3	YLR221C	NMD2	P38798	1089 aa	Known RBP	7.7	□□□□□ -1.18
RSA3	YLR221C	SPO71	Q03868	1245 aa		7.7	□□□□□ -1.18
RSA3	YLR221C	PRI2	P20457	528 aa		7.69	□□□□□ -1.18
RSA3	YLR221C	GRX1	P25373	110 aa	Known RBP	7.69	□□□□□ -1.18
RSA3	YLR221C	UTP22	P53254	1237 aa	Predicted RBP	7.69	□□□□□ -1.18
RSA3	YLR221C	NAN1	Q02931	896 aa	Known RBP	7.69	□□□□□ -1.18
RSA3	YLR221C	YIG1	Q08956	461 aa		7.69	□□□□□ -1.18
RSA3	YLR221C	CDC53	Q12018	815 aa	Known RBP	7.69	□□□□□ -1.18
RSA3	YLR221C	ELG1	Q12050	791 aa		7.69	□□□□□ -1.18
RSA3	YLR221C	YOR131C	Q12486	218 aa		7.69	□□□□□ -1.18
RSA3	YLR221C	LIP5	P32875	414 aa		7.68	□□□□□ -1.18
RSA3	YLR221C	RDH54	P38086	958 aa		7.68	□□□□□ -1.18
RSA3	YLR221C	SPF1	P39986	1215 aa	Known RBP	7.68	□□□□□ -1.18
RSA3	YLR221C	MTR4	P47047	1073 aa	Known RBP	7.68	□□□□□ -1.18
RSA3	YLR221C	EEB1	Q02891	456 aa		7.68	□□□□□ -1.18
RSA3	YLR221C	HAS1	Q03532	505 aa	Known RBP	7.68	□□□□□ -1.18
RSA3	YLR221C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.67	□□□□□ -1.18	not detected
RSA3	YLR221C	RPN4	Q03465	531 aa		7.67	□□□□□ -1.18
RSA3	YLR221C	SPO20	Q04359	397 aa		7.67	□□□□□ -1.18
RSA3	YLR221C	BDF2	Q07442	638 aa		7.67	□□□□□ -1.18
RSA3	YLR221C	BAS1	P22035	811 aa		7.66	□□□□□ -1.18
RSA3	YLR221C	ARL1	P38116	183 aa	Known RBP	7.66	□□□□□ -1.18
RSA3	YLR221C	BRN1	P38170	754 aa		7.66	□□□□□ -1.18
RSA3	YLR221C	TYW3	P53177	273 aa		7.66	□□□□□ -1.18
RSA3	YLR221C	NCE103	P53615	221 aa		7.66	□□□□□ -1.18
RSA3	YLR221C	TY1A-LR4	P0C2I8	440 aa	Known RBP	7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-DR6	P0CX70	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-ER1	P0CX71	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-LR2	P0CX72	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-PL	P0CX73	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-JR1	P0CX74	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-LR3	P0CX75	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-ML2	P0CX76	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	HEM13	P11353	328 aa	Known RBP	7.65	□□□□□ -1.18
RSA3	YLR221C	ERS1	P17261	260 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	LYP1	P32487	611 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	ATG14	P38270	344 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	HXT13	P39924	564 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	HXT17	P53631	564 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	HXT15	P54854	567 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	DOS2	P54858	310 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.65	□□□□□ -1.18	not detected
RSA3	YLR221C	EST2	Q06163	884 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-GR1	Q12085	440 aa		7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	7.65	□□□□□ -1.18
RSA3	YLR221C	TY1A-OL	Q92392	440 aa	Known RBP	7.65	□□□□□ -1.18
RSA3	YLR221C	TRP2	P00899	507 aa	Known RBP	7.64	□□□□□ -1.19
RSA3	YLR221C	RAD4	P14736	754 aa		7.64	□□□□□ -1.19
RSA3	YLR221C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	7.64	□□□□□ -1.19	not detected
RSA3	YLR221C	RER2	P35196	286 aa		7.64	□□□□□ -1.19
RSA3	YLR221C	TAT2	P38967	592 aa		7.64	□□□□□ -1.19
RSA3	YLR221C	CTH1	P47976	325 aa		7.64	□□□□□ -1.19
RSA3	YLR221C	CYC7	P00045	113 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	ADD66	P36040	267 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	YKL069W	P36088	180 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	SPO74	P45819	413 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	GCV1	P48015	400 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	KIP3	P53086	805 aa	Known RBP	7.63	□□□□□ -1.19
RSA3	YLR221C	RNH70	P53331	553 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	ROD1	Q02805	837 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	BRE4	Q07660	1125 aa		7.63	□□□□□ -1.19
RSA3	YLR221C	AGP1	P25376	633 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	SBA1	P28707	216 aa	Known RBP	7.62	□□□□□ -1.19
RSA3	YLR221C	PPG1	P32838	368 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	NEM1	P38757	446 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	TIM54	P47045	478 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	AVT1	P47082	602 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	MEC3	Q02574	474 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	RKM2	Q03942	479 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	UTP5	Q04177	643 aa	Known RBP	7.62	□□□□□ -1.19
RSA3	YLR221C	YLL054C	Q12244	843 aa		7.62	□□□□□ -1.19
RSA3	YLR221C	DED1	P06634	604 aa	Known RBP	7.61	□□□□□ -1.19
RSA3	YLR221C	SNF7	P39929	240 aa	Known RBP	7.61	□□□□□ -1.19
RSA3	YLR221C	IRC24	P40580	263 aa		7.61	□□□□□ -1.19
RSA3	YLR221C	HUL5	P53119	910 aa		7.61	□□□□□ -1.19
RSA3	YLR221C	SHE9	Q04172	456 aa		7.61	□□□□□ -1.19
RSA3	YLR221C	CIT2	P08679	460 aa		7.6	□□□□□ -1.19
RSA3	YLR221C	MKK2	P32491	506 aa		7.6	□□□□□ -1.19
RSA3	YLR221C	MRP8	P35719	219 aa		7.6	□□□□□ -1.19
RSA3	YLR221C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7.6	□□□□□ -1.19	not detected
RSA3	YLR221C	SLS1	P42900	643 aa		7.6	□□□□□ -1.19
RSA3	YLR221C	FAR11	P53917	953 aa		7.6	□□□□□ -1.19
RSA3	YLR221C	SPO75	Q07798	868 aa		7.6	□□□□□ -1.19
RSA3	YLR221C	MSB1	P21339	1137 aa	Known RBP	7.59	□□□□□ -1.19
RSA3	YLR221C	SYP1	P25623	870 aa	Known RBP	7.59	□□□□□ -1.19
RSA3	YLR221C	RRP14	P36080	434 aa	Known RBP	7.58	□□□□□ -1.2
RSA3	YLR221C	SPC42	P36094	363 aa		7.58	□□□□□ -1.2
RSA3	YLR221C	REI1	P38344	393 aa	Predicted RBP	7.58	□□□□□ -1.2
RSA3	YLR221C	BUD6	P41697	788 aa		7.58	□□□□□ -1.2
RSA3	YLR221C	GIC2	Q06648	383 aa		7.58	□□□□□ -1.2
RSA3	YLR221C	OSH2	Q12451	1283 aa		7.58	□□□□□ -1.2
RSA3	YLR221C	RKM4	Q12504	494 aa		7.58	□□□□□ -1.2
RSA3	YLR221C	ABD1	P32783	436 aa	Predicted RBP	7.57	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 279.4 ms