RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W ENO2P00925 437 aaKnown RBP5.25□□□□□ -1.57
CBF5YLR175W RPL19AP0CX82 189 aaKnown RBP5.25□□□□□ -1.57
CBF5YLR175W RPL19BP0CX83 189 aaPredicted RBP5.25□□□□□ -1.57
CBF5YLR175W SRM1P21827 482 aa5.25□□□□□ -1.57
CBF5YLR175W RAD53P22216 821 aa5.25□□□□□ -1.57
CBF5YLR175W MAK31P23059 88 aa5.25□□□□□ -1.57
CBF5YLR175W ADP1P25371 1049 aa5.25□□□□□ -1.57
CBF5YLR175W NIT1P40447 199 aa5.25□□□□□ -1.57
CBF5YLR175W VID28P40547 921 aa5.25□□□□□ -1.57
CBF5YLR175W ALG2P43636 503 aa5.25□□□□□ -1.57
CBF5YLR175W NPA3P47122 385 aa5.25□□□□□ -1.57
CBF5YLR175W SNU71P53207 620 aaKnown RBP5.25□□□□□ -1.57
CBF5YLR175W NAF1P53919 492 aaKnown RBP5.25□□□□□ -1.57
CBF5YLR175W ARP5P53946 755 aa5.25□□□□□ -1.57
CBF5YLR175W MYO5Q04439 1219 aaKnown RBP5.25□□□□□ -1.57
CBF5YLR175W YLR407WQ06070 228 aa5.25□□□□□ -1.57
CBF5YLR175W TFC6Q06339 672 aa5.25□□□□□ -1.57
CBF5YLR175W CLF1Q12309 687 aaPredicted RBP5.25□□□□□ -1.57
CBF5YLR175W CBP1P07252 654 aa5.24□□□□□ -1.57
CBF5YLR175W CBP3P21560 335 aa5.24□□□□□ -1.57
CBF5YLR175W RIT1P23796 513 aa5.24□□□□□ -1.57
CBF5YLR175W SAP30P38429 201 aa5.24□□□□□ -1.57
CBF5YLR175W PEA2P40091 420 aa5.24□□□□□ -1.57
CBF5YLR175W ISM1P48526 1002 aa5.24□□□□□ -1.57
CBF5YLR175W HDA1P53973 706 aa5.24□□□□□ -1.57
CBF5YLR175W PUS5Q06244 254 aa5.24□□□□□ -1.57
CBF5YLR175W YPL150WQ12152 901 aa5.24□□□□□ -1.57
CBF5YLR175W TUS1Q06412 1307 aa5.23□□□□□ -1.57
CBF5YLR175W ENO1P00924 437 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W PMA1P05030 918 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W PRO3P32263 286 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W MAL31P38156 614 aa5.23□□□□□ -1.57
CBF5YLR175W CST26P38226 397 aa5.23□□□□□ -1.57
CBF5YLR175W KEL1P38853 1164 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W VPS8P39702 1274 aa5.23□□□□□ -1.57
CBF5YLR175W BDH2P39713 417 aa5.23□□□□□ -1.57
CBF5YLR175W HYR1P40581 163 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W PTK2P47116 818 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W STR2P47164 639 aa5.23□□□□□ -1.57
CBF5YLR175W CTF18P49956 741 aa5.23□□□□□ -1.57
CBF5YLR175W RPT6Q01939 405 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W TBF1Q02457 562 aa5.23□□□□□ -1.57
CBF5YLR175W YDL124WQ07551 312 aaKnown RBP5.23□□□□□ -1.57
CBF5YLR175W ELG1Q12050 791 aa5.23□□□□□ -1.57
CBF5YLR175W CSR2Q12734 1121 aa5.23□□□□□ -1.57
CBF5YLR175W BIK1P11709 440 aa5.22□□□□□ -1.57
CBF5YLR175W GAL2P13181 574 aa5.22□□□□□ -1.57
CBF5YLR175W PFK2P16862 959 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
CBF5YLR175W RNR3P21672 869 aaKnown RBP5.22□□□□□ -1.57
CBF5YLR175W ASF1P32447 279 aa5.22□□□□□ -1.57
CBF5YLR175W GCD11P32481 527 aaKnown RBP5.22□□□□□ -1.57
CBF5YLR175W BMH2P34730 273 aaKnown RBP5.22□□□□□ -1.57
CBF5YLR175W YBL028CP38202 106 aa5.22□□□□□ -1.57
CBF5YLR175W TPS3P38426 1054 aaKnown RBP5.22□□□□□ -1.57
CBF5YLR175W RIM21P48565 533 aa5.22□□□□□ -1.57
CBF5YLR175W HST1P53685 503 aa5.22□□□□□ -1.57
CBF5YLR175W BNI4P53858 892 aa5.22□□□□□ -1.57
CBF5YLR175W HRQ1Q05549 1077 aa5.22□□□□□ -1.57
CBF5YLR175W MRX10Q05648 414 aa5.22□□□□□ -1.57
CBF5YLR175W CPA2P03965 1118 aaKnown RBP5.21□□□□□ -1.58
CBF5YLR175W RPL8BP29453 256 aaKnown RBP5.21□□□□□ -1.58
CBF5YLR175W CHS3P29465 1165 aa5.21□□□□□ -1.58
CBF5YLR175W TOM71P38825 639 aaKnown RBP5.21□□□□□ -1.58
CBF5YLR175W AKR1P39010 764 aa5.21□□□□□ -1.58
CBF5YLR175W SLX8P40072 274 aa5.21□□□□□ -1.58
CBF5YLR175W BUD6P41697 788 aa5.21□□□□□ -1.58
CBF5YLR175W FOL1P53848 824 aa5.21□□□□□ -1.58
CBF5YLR175W FAR11P53917 953 aa5.21□□□□□ -1.58
CBF5YLR175W CWC15Q03772 175 aaKnown RBP5.21□□□□□ -1.58
CBF5YLR175W TUB2P02557 457 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W NUC1P08466 329 aa5.2□□□□□ -1.58
CBF5YLR175W PGI1P12709 554 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W RAM1P22007 431 aa5.2□□□□□ -1.58
CBF5YLR175W SWI4P25302 1093 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W PRX1P34227 261 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W TIF4631P39935 952 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W CSM2P40465 213 aa5.2□□□□□ -1.58
CBF5YLR175W PEX14P53112 341 aa5.2□□□□□ -1.58
CBF5YLR175W RRT6P53117 311 aaPredicted RBP5.2□□□□□ -1.58
CBF5YLR175W TUB4P53378 473 aa5.2□□□□□ -1.58
CBF5YLR175W VPS30Q02948 557 aa5.2□□□□□ -1.58
CBF5YLR175W GDE1Q02979 1223 aa5.2□□□□□ -1.58
CBF5YLR175W AGE1Q04412 482 aa5.2□□□□□ -1.58
CBF5YLR175W BUD20Q08004 166 aaPredicted RBP5.2□□□□□ -1.58
CBF5YLR175W NOB1Q08444 459 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W DSE3Q08729 430 aa5.2□□□□□ -1.58
CBF5YLR175W YOR111WQ99210 232 aa5.2□□□□□ -1.58
CBF5YLR175W SEC2P17065 759 aa5.2□□□□□ -1.58
CBF5YLR175W SRP54P20424 541 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W MSP1P28737 362 aa5.2□□□□□ -1.58
CBF5YLR175W SEC20P28791 383 aa5.2□□□□□ -1.58
CBF5YLR175W ELM1P32801 640 aa5.2□□□□□ -1.58
CBF5YLR175W SPT23P35210 1082 aa5.2□□□□□ -1.58
CBF5YLR175W MAL33P38157 468 aa5.2□□□□□ -1.58
CBF5YLR175W RXT2P38255 430 aa5.2□□□□□ -1.58
CBF5YLR175W RPA14P50106 137 aa5.2□□□□□ -1.58
CBF5YLR175W SOL4P53315 255 aa5.2□□□□□ -1.58
CBF5YLR175W EAF7P53911 425 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W ELP4Q02884 456 aaKnown RBP5.2□□□□□ -1.58
CBF5YLR175W LAP2Q10740 671 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms