RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W YNR040WP53736 256 aa2.02□□□□□ -2.09
SLX4YLR135W YAF9P53930 226 aa2.02□□□□□ -2.09
SLX4YLR135W ALD3P54114 506 aa2.02□□□□□ -2.09
SLX4YLR135W ALD6P54115 500 aaKnown RBP2.02□□□□□ -2.09
SLX4YLR135W NOG1Q02892 647 aaKnown RBP2.02□□□□□ -2.09
SLX4YLR135W CLU1Q03690 1277 aaKnown RBP2.02□□□□□ -2.09
SLX4YLR135W CMR1Q12510 522 aaKnown RBP2.02□□□□□ -2.09
SLX4YLR135W SEC23P15303 768 aaKnown RBP2.01□□□□□ -2.09
SLX4YLR135W ADP1P25371 1049 aa2.01□□□□□ -2.09
SLX4YLR135W PEP7P32609 515 aa2.01□□□□□ -2.09
SLX4YLR135W DUT1P33317 147 aa2.01□□□□□ -2.09
SLX4YLR135W ECM2P38241 364 aaKnown RBP2.01□□□□□ -2.09
SLX4YLR135W VAC8P39968 578 aa2.01□□□□□ -2.09
SLX4YLR135W PIC2P40035 300 aa2.01□□□□□ -2.09
SLX4YLR135W GNP1P48813 663 aa2.01□□□□□ -2.09
SLX4YLR135W YGR053CP53234 283 aa2.01□□□□□ -2.09
SLX4YLR135W DOS2P54858 310 aa2.01□□□□□ -2.09
SLX4YLR135W YOL098CQ12496 1037 aa2.01□□□□□ -2.09
SLX4YLR135W NPR1P22211 790 aa2.01□□□□□ -2.09
SLX4YLR135W UGA4P32837 571 aa2.01□□□□□ -2.09
SLX4YLR135W INP51P40559 946 aaKnown RBP2.01□□□□□ -2.09
SLX4YLR135W SOG2Q08817 791 aa2.01□□□□□ -2.09
SLX4YLR135W RTT10Q08924 1013 aa2.01□□□□□ -2.09
SLX4YLR135W GLO4Q12320 285 aa2.01□□□□□ -2.09
SLX4YLR135W TFA2P36145 328 aa2□□□□□ -2.09
SLX4YLR135W SHU2P38957 223 aa2□□□□□ -2.09
SLX4YLR135W TAT2P38967 592 aa2□□□□□ -2.09
SLX4YLR135W MON1P53129 644 aa2□□□□□ -2.09
SLX4YLR135W BIO5P53744 561 aaKnown RBP2□□□□□ -2.09
SLX4YLR135W VMA4P22203 233 aaKnown RBP1.99□□□□□ -2.09
SLX4YLR135W CTS1P29029 562 aa1.99□□□□□ -2.09
SLX4YLR135W SQT1P35184 431 aa1.99□□□□□ -2.09
SLX4YLR135W RDH54P38086 958 aa1.99□□□□□ -2.09
SLX4YLR135W LEM3P42838 414 aa1.99□□□□□ -2.09
SLX4YLR135W IOC3P43596 787 aa1.99□□□□□ -2.09
SLX4YLR135W RSM26P47141 266 aa1.99□□□□□ -2.09
SLX4YLR135W YGL140CP53120 1219 aa1.99□□□□□ -2.09
SLX4YLR135W SIW14P53965 281 aa1.99□□□□□ -2.09
SLX4YLR135W YIG1Q08956 461 aa1.99□□□□□ -2.09
SLX4YLR135W TMA46Q12000 345 aaKnown RBP1.99□□□□□ -2.09
SLX4YLR135W PUS9Q12069 462 aa1.99□□□□□ -2.09
SLX4YLR135W WRS1Q12109 432 aaKnown RBP1.99□□□□□ -2.09
SLX4YLR135W SOD2P00447 233 aa1.99□□□□□ -2.09
SLX4YLR135W ARL1P38116 183 aaKnown RBP1.99□□□□□ -2.09
SLX4YLR135W EXO5P38289 585 aa1.99□□□□□ -2.09
SLX4YLR135W NMD2P38798 1089 aaKnown RBP1.99□□□□□ -2.09
SLX4YLR135W PEX28P38848 579 aa1.99□□□□□ -2.09
SLX4YLR135W HXT13P39924 564 aa1.99□□□□□ -2.09
SLX4YLR135W FET4P40988 552 aa1.99□□□□□ -2.09
SLX4YLR135W YJR124CP47159 448 aa1.99□□□□□ -2.09
SLX4YLR135W FAA4P47912 694 aaKnown RBP1.99□□□□□ -2.09
SLX4YLR135W GUP1P53154 560 aa1.99□□□□□ -2.09
SLX4YLR135W HXT17P53631 564 aa1.99□□□□□ -2.09
SLX4YLR135W HXT15P54854 567 aa1.99□□□□□ -2.09
SLX4YLR135W GDE1Q02979 1223 aa1.99□□□□□ -2.09
SLX4YLR135W RPN4Q03465 531 aa1.99□□□□□ -2.09
SLX4YLR135W GCR1P07261 785 aa1.98□□□□□ -2.09
SLX4YLR135W HTS1P07263 546 aaKnown RBP1.98□□□□□ -2.09
SLX4YLR135W HEM13P11353 328 aaKnown RBP1.98□□□□□ -2.09
SLX4YLR135W STI1P15705 589 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SLX4YLR135W MSH3P25336 1018 aa1.98□□□□□ -2.09
SLX4YLR135W TRM2P33753 639 aa1.98□□□□□ -2.09
SLX4YLR135W XKS1P42826 600 aa1.98□□□□□ -2.09
SLX4YLR135W RCM1P53972 490 aa1.98□□□□□ -2.09
SLX4YLR135W EEB1Q02891 456 aa1.98□□□□□ -2.09
SLX4YLR135W NSE3Q05541 303 aa1.98□□□□□ -2.09
SLX4YLR135W MRL1Q06815 381 aa1.98□□□□□ -2.09
SLX4YLR135W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SLX4YLR135W SPF1P39986 1215 aaKnown RBP1.98□□□□□ -2.09
SLX4YLR135W KRI1P42846 591 aaKnown RBP1.98□□□□□ -2.09
SLX4YLR135W OSW7P43611 510 aa1.98□□□□□ -2.09
SLX4YLR135W NCE103P53615 221 aa1.98□□□□□ -2.09
SLX4YLR135W CWC24P53769 259 aa1.98□□□□□ -2.09
SLX4YLR135W MRPL22P53881 309 aa1.98□□□□□ -2.09
SLX4YLR135W RKM2Q03942 479 aa1.98□□□□□ -2.09
SLX4YLR135W OPI10Q08202 246 aa1.98□□□□□ -2.09
SLX4YLR135W MRP10O75012 95 aa1.97□□□□□ -2.09
SLX4YLR135W TRP2P00899 507 aaKnown RBP1.97□□□□□ -2.09
SLX4YLR135W TY1A-LR4P0C2I8 440 aaKnown RBP1.97□□□□□ -2.09
SLX4YLR135W TY1A-DR6P0CX70 440 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-ER1P0CX71 440 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-LR2P0CX72 440 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-PLP0CX73 440 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-JR1P0CX74 440 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-LR3P0CX75 440 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-ML2P0CX76 440 aa1.97□□□□□ -2.09
SLX4YLR135W AGP1P25376 633 aa1.97□□□□□ -2.09
SLX4YLR135W BUD6P41697 788 aa1.97□□□□□ -2.09
SLX4YLR135W YJL181WP46987 611 aa1.97□□□□□ -2.09
SLX4YLR135W GCV1P48015 400 aa1.97□□□□□ -2.09
SLX4YLR135W NAN1Q02931 896 aaKnown RBP1.97□□□□□ -2.09
SLX4YLR135W HAS1Q03532 505 aaKnown RBP1.97□□□□□ -2.09
SLX4YLR135W SHE9Q04172 456 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-GR1Q12085 440 aa1.97□□□□□ -2.09
SLX4YLR135W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.97□□□□□ -2.09
SLX4YLR135W TY1A-OLQ92392 440 aaKnown RBP1.97□□□□□ -2.09
SLX4YLR135W GRX1P25373 110 aaKnown RBP1.97□□□□□ -2.09
SLX4YLR135W RAD27P26793 382 aa1.97□□□□□ -2.09
SLX4YLR135W LYP1P32487 611 aa1.97□□□□□ -2.09
SLX4YLR135W RRP14P36080 434 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms