RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	RSC4	Q02206	625 aa		3.2	□□□□□ -1.9
NUP120	YKL057C	APC11	Q12157	165 aa		3.2	□□□□□ -1.9
NUP120	YKL057C	SYP1	P25623	870 aa	Known RBP	3.19	□□□□□ -1.9
NUP120	YKL057C	MLS1	P30952	554 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	BRN1	P38170	754 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	GTS1	P40956	396 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	MET6	P05694	767 aa	Known RBP	3.19	□□□□□ -1.9
NUP120	YKL057C	SHR5	P41912	237 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	GAS5	Q08193	484 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	RPS31	P05759	152 aa	Known RBP	3.19	□□□□□ -1.9
NUP120	YKL057C	HSP60	P19882	572 aa	Known RBP	3.19	□□□□□ -1.9
NUP120	YKL057C	SBE2	P42223	864 aa	Known RBP	3.19	□□□□□ -1.9
NUP120	YKL057C	SLS1	P42900	643 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	ALD3	P54114	506 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	HAS1	Q03532	505 aa	Known RBP	3.19	□□□□□ -1.9
NUP120	YKL057C	SYT1	Q06836	1226 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	YGR161W-C	Q3E744	92 aa		3.19	□□□□□ -1.9
NUP120	YKL057C	ADE8	P04161	214 aa		3.18	□□□□□ -1.9
NUP120	YKL057C	VPS53	P47061	822 aa		3.18	□□□□□ -1.9
NUP120	YKL057C	TDA6	Q06466	467 aa		3.18	□□□□□ -1.9
NUP120	YKL057C	YOL098C	Q12496	1037 aa		3.18	□□□□□ -1.9
NUP120	YKL057C	RET1	P22276	1149 aa	Known RBP	3.18	□□□□□ -1.9
NUP120	YKL057C	APL1	P27351	700 aa		3.18	□□□□□ -1.9
NUP120	YKL057C	TNA1	P53322	534 aa		3.18	□□□□□ -1.9
NUP120	YKL057C	KIN2	P13186	1147 aa	Known RBP	3.17	□□□□□ -1.9
NUP120	YKL057C	TRK2	P28584	889 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	PRO1	P32264	428 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	MRP8	P35719	219 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	NIT3	P49954	291 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	RCM1	P53972	490 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	DOM34	P33309	386 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	YHL012W	P38709	493 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	MMM1	P41800	426 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	TYW3	P53177	273 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	MEC3	Q02574	474 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	AOS1	Q06624	347 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	GPI13	Q07830	1017 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	OPI10	Q08202	246 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	SOG2	Q08817	791 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	PHM7	Q12252	991 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	CHS2	P14180	963 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
NUP120	YKL057C	ALG3	P38179	458 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	YJR107W	P47145	328 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	ERP6	P53198	216 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	YPL109C	Q02981	657 aa		3.17	□□□□□ -1.9
NUP120	YKL057C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
NUP120	YKL057C	FPR4	Q06205	392 aa	Predicted RBP	3.17	□□□□□ -1.9
NUP120	YKL057C	NUP145	P49687	1317 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	GCR1	P07261	785 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	RPC31	P17890	251 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	GSY1	P23337	708 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	YER156C	P40093	338 aa	Known RBP	3.16	□□□□□ -1.9
NUP120	YKL057C	VPS16	Q03308	798 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	RSM24	Q03976	319 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	OSW2	Q12202	724 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	RPS4A	P0CX35	261 aa	Known RBP	3.16	□□□□□ -1.9
NUP120	YKL057C	RPS4B	P0CX36	261 aa	Known RBP	3.16	□□□□□ -1.9
NUP120	YKL057C	NAR1	P23503	491 aa	Known RBP	3.16	□□□□□ -1.9
NUP120	YKL057C	NNK1	P36003	928 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	PSP2	P50109	593 aa	Known RBP	3.16	□□□□□ -1.9
NUP120	YKL057C	SKP1	P52286	194 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	GIS4	Q04233	774 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	UBX5	Q06682	500 aa		3.16	□□□□□ -1.9
NUP120	YKL057C	HTS1	P07263	546 aa	Known RBP	3.15	□□□□□ -1.9
NUP120	YKL057C	YBR284W	P38150	797 aa		3.15	□□□□□ -1.9
NUP120	YKL057C	YJL049W	P47048	450 aa		3.15	□□□□□ -1.9
NUP120	YKL057C	THS1	P04801	734 aa	Known RBP	3.15	□□□□□ -1.91
NUP120	YKL057C	ACO2	P39533	789 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	CNN1	P43618	361 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	HLJ1	P48353	224 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	YGR045C	P53229	120 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	SRC1	Q03707	834 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	GRX1	P25373	110 aa	Known RBP	3.15	□□□□□ -1.91
NUP120	YKL057C	KAE1	P36132	386 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	PAM1	P37304	830 aa	Known RBP	3.15	□□□□□ -1.91
NUP120	YKL057C	PTC7	P38797	343 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	YNR065C	P53751	1116 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	SLP1	Q12232	587 aa		3.15	□□□□□ -1.91
NUP120	YKL057C	MRP10	O75012	95 aa		3.14	□□□□□ -1.91
NUP120	YKL057C	CCP1	P00431	361 aa		3.14	□□□□□ -1.91
NUP120	YKL057C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
NUP120	YKL057C	GCV1	P48015	400 aa		3.14	□□□□□ -1.91
NUP120	YKL057C	HUL5	P53119	910 aa		3.14	□□□□□ -1.91
NUP120	YKL057C	YGR130C	P53278	816 aa		3.14	□□□□□ -1.91
NUP120	YKL057C	HXK1	P04806	485 aa	Known RBP	3.14	□□□□□ -1.91
NUP120	YKL057C	ERS1	P17261	260 aa		3.14	□□□□□ -1.91
NUP120	YKL057C	NAM7	P30771	971 aa	Known RBP	3.14	□□□□□ -1.91
NUP120	YKL057C	GGA2	P38817	585 aa	Known RBP	3.14	□□□□□ -1.91
NUP120	YKL057C	RAT1	Q02792	1006 aa	Known RBP	3.14	□□□□□ -1.91
NUP120	YKL057C	POB3	Q04636	552 aa	Known RBP	3.14	□□□□□ -1.91
NUP120	YKL057C	CMR1	Q12510	522 aa	Known RBP	3.14	□□□□□ -1.91
NUP120	YKL057C	PHO8	P11491	566 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	CDC34	P14682	295 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	VMA4	P22203	233 aa	Known RBP	3.13	□□□□□ -1.91
NUP120	YKL057C	ADP1	P25371	1049 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	RNH70	P53331	553 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	MSH6	Q03834	1242 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	YPR071W	Q12346	211 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	TRP2	P00899	507 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms