RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W OSM1P21375 501 aaKnown RBP6.7□□□□□ -1.34
CBF1YJR060W KCC4P25389 1037 aa6.7□□□□□ -1.34
CBF1YJR060W ISW1P38144 1129 aa6.7□□□□□ -1.34
CBF1YJR060W YBR287WP38355 427 aa6.7□□□□□ -1.34
CBF1YJR060W BSD2P38356 321 aa6.7□□□□□ -1.34
CBF1YJR060W RTR1P40084 226 aaPredicted RBP6.7□□□□□ -1.34
CBF1YJR060W JJJ3P47138 172 aa6.7□□□□□ -1.34
CBF1YJR060W RRP46P53256 223 aaPredicted RBP6.7□□□□□ -1.34
CBF1YJR060W YNR040WP53736 256 aa6.7□□□□□ -1.34
CBF1YJR060W HEH2Q03281 663 aa6.7□□□□□ -1.34
CBF1YJR060W RRP15Q06511 250 aaPredicted RBP6.7□□□□□ -1.34
CBF1YJR060W WHI5Q12416 295 aa6.7□□□□□ -1.34
CBF1YJR060W TRK2P28584 889 aa6.69□□□□□ -1.34
CBF1YJR060W NAB2P32505 525 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34 RIP-Chip
CBF1YJR060W ACF4P47129 309 aa6.69□□□□□ -1.34
CBF1YJR060W LYS4P49367 693 aaPredicted RBP6.69□□□□□ -1.34
CBF1YJR060W RMT2Q03305 412 aa6.69□□□□□ -1.34
CBF1YJR060W BUG1Q12191 341 aa6.69□□□□□ -1.34
CBF1YJR060W MGE1P38523 228 aa6.68□□□□□ -1.34
CBF1YJR060W MDG1P53885 366 aa6.68□□□□□ -1.34
CBF1YJR060W TY1A-DR2Q03964 440 aaKnown RBP6.68□□□□□ -1.34
CBF1YJR060W NUT2Q06213 157 aa6.68□□□□□ -1.34
CBF1YJR060W PRD1P25375 712 aa6.67□□□□□ -1.34
CBF1YJR060W SMC1P32908 1225 aa6.67□□□□□ -1.34
CBF1YJR060W KTR2P33550 425 aa6.67□□□□□ -1.34
CBF1YJR060W MSC7P38694 644 aa6.67□□□□□ -1.34
CBF1YJR060W CTH1P47976 325 aa6.67□□□□□ -1.34
CBF1YJR060W ITC1P53125 1264 aa6.67□□□□□ -1.34
CBF1YJR060W UTP22P53254 1237 aaPredicted RBP6.67□□□□□ -1.34
CBF1YJR060W YNL050CP53952 270 aa6.67□□□□□ -1.34
CBF1YJR060W OYE2Q03558 400 aaKnown RBP6.67□□□□□ -1.34
CBF1YJR060W RPP0P05317 312 aaKnown RBP6.66□□□□□ -1.34
CBF1YJR060W SEC8P32855 1065 aa6.66□□□□□ -1.34
CBF1YJR060W ALD3P54114 506 aa6.66□□□□□ -1.34
CBF1YJR060W SVF1Q05515 481 aa6.66□□□□□ -1.34
CBF1YJR060W NSE3Q05541 303 aa6.66□□□□□ -1.34
CBF1YJR060W RAD55P38953 406 aa6.65□□□□□ -1.34
CBF1YJR060W MAM1P40065 302 aa6.65□□□□□ -1.34
CBF1YJR060W RGD2P43556 714 aa6.65□□□□□ -1.34
CBF1YJR060W YFR016CP43597 1233 aaKnown RBP6.65□□□□□ -1.34
CBF1YJR060W UFD2P54860 961 aa6.65□□□□□ -1.34
CBF1YJR060W FRT1Q99332 602 aa6.65□□□□□ -1.34
CBF1YJR060W NTA1P40354 457 aa6.64□□□□□ -1.35
CBF1YJR060W YDL144CQ07589 356 aa6.64□□□□□ -1.35
CBF1YJR060W GPM1P00950 247 aaKnown RBP6.63□□□□□ -1.35
CBF1YJR060W YIL165CP40446 119 aa6.63□□□□□ -1.35
CBF1YJR060W TRS120Q04183 1289 aa6.63□□□□□ -1.35
CBF1YJR060W ALE1Q08548 619 aa6.63□□□□□ -1.35
CBF1YJR060W IRS4P36115 615 aaKnown RBP6.62□□□□□ -1.35
CBF1YJR060W AIM46P38885 310 aa6.62□□□□□ -1.35
CBF1YJR060W PRK1P40494 810 aa6.62□□□□□ -1.35
CBF1YJR060W MPP10P47083 593 aaKnown RBP6.62□□□□□ -1.35
CBF1YJR060W ZDS1P50111 915 aaKnown RBP6.62□□□□□ -1.35
CBF1YJR060W EMG1Q06287 252 aaKnown RBP6.62□□□□□ -1.35
CBF1YJR060W SSP2Q08646 371 aa6.62□□□□□ -1.35
CBF1YJR060W TIF6Q12522 245 aaKnown RBP6.62□□□□□ -1.35
CBF1YJR060W IDI1P15496 288 aa6.61□□□□□ -1.35
CBF1YJR060W PDC5P16467 563 aaKnown RBP6.61□□□□□ -1.35
CBF1YJR060W YER156CP40093 338 aaKnown RBP6.61□□□□□ -1.35
CBF1YJR060W PSY2P40164 858 aa6.61□□□□□ -1.35
CBF1YJR060W THI22Q06490 572 aa6.61□□□□□ -1.35
CBF1YJR060W PHM7Q12252 991 aa6.61□□□□□ -1.35
CBF1YJR060W KNS1P32350 737 aaPredicted RBP6.6□□□□□ -1.35
CBF1YJR060W MET4P32389 672 aa6.6□□□□□ -1.35
CBF1YJR060W TOS1P38288 455 aa6.6□□□□□ -1.35
CBF1YJR060W YJR107WP47145 328 aa6.6□□□□□ -1.35
CBF1YJR060W JIP5Q06214 492 aaPredicted RBP6.6□□□□□ -1.35
CBF1YJR060W RSC2Q06488 889 aa6.6□□□□□ -1.35
CBF1YJR060W AI1P03875 834 aa6.59□□□□□ -1.35
CBF1YJR060W MET1P36150 593 aa6.59□□□□□ -1.35
CBF1YJR060W VPS27P40343 622 aaKnown RBP6.59□□□□□ -1.35
CBF1YJR060W GYP7P48365 746 aa6.59□□□□□ -1.35
CBF1YJR060W HEF3P53978 1044 aaKnown RBP6.59□□□□□ -1.35
CBF1YJR060W RTT109Q07794 436 aa6.59□□□□□ -1.35
CBF1YJR060W OCA5P38738 679 aa6.58□□□□□ -1.36
CBF1YJR060W NNF1P47149 201 aa6.58□□□□□ -1.36
CBF1YJR060W PPT1P53043 513 aa6.58□□□□□ -1.36
CBF1YJR060W YNL011CP53980 444 aa6.58□□□□□ -1.36
CBF1YJR060W CDC45Q08032 650 aa6.58□□□□□ -1.36
CBF1YJR060W BMS1Q08965 1183 aaKnown RBP6.58□□□□□ -1.36
CBF1YJR060W RRT14P40470 206 aa6.57□□□□□ -1.36
CBF1YJR060W SAP155P43612 1002 aa6.57□□□□□ -1.36
CBF1YJR060W YRB30P53107 440 aaPredicted RBP6.57□□□□□ -1.36
CBF1YJR060W RAT1Q02792 1006 aaKnown RBP6.57□□□□□ -1.36
CBF1YJR060W THI72Q08579 599 aa6.57□□□□□ -1.36
CBF1YJR060W NYV1Q12255 253 aa6.57□□□□□ -1.36
CBF1YJR060W PMD1P32634 1753 aa6.57□□□□□ -1.36
CBF1YJR060W SSK22P25390 1331 aaPredicted RBP6.56□□□□□ -1.36
CBF1YJR060W COQ4O13525 335 aa6.56□□□□□ -1.36
CBF1YJR060W MRP10O75012 95 aa6.56□□□□□ -1.36
CBF1YJR060W BUD27P43573 796 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
CBF1YJR060W RSC4Q02206 625 aa6.56□□□□□ -1.36
CBF1YJR060W DIB1Q06819 143 aaPredicted RBP6.56□□□□□ -1.36
CBF1YJR060W MNL2Q12205 849 aa6.56□□□□□ -1.36
CBF1YJR060W SER1P33330 395 aaKnown RBP6.55□□□□□ -1.36
CBF1YJR060W YOL057WQ08225 711 aa6.55□□□□□ -1.36
CBF1YJR060W HKR1P41809 1802 aa6.55□□□□□ -1.36
CBF1YJR060W LPD1P09624 499 aaKnown RBP6.54□□□□□ -1.36
CBF1YJR060W SUI2P20459 304 aaKnown RBP6.54□□□□□ -1.36
CBF1YJR060W ALG14P38242 237 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms