RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W MDJ2P42834 146 aa5.16□□□□□ -1.58
SNX4YJL036W GSF2Q04697 403 aaKnown RBP5.16□□□□□ -1.58
SNX4YJL036W YHL012WP38709 493 aa5.15□□□□□ -1.59
SNX4YJL036W SNO2P53823 222 aa5.15□□□□□ -1.59
SNX4YJL036W YCS4Q06156 1176 aa5.15□□□□□ -1.59
SNX4YJL036W RET1P22276 1149 aaKnown RBP5.14□□□□□ -1.59
SNX4YJL036W ERP5P38819 212 aa5.14□□□□□ -1.59
SNX4YJL036W NMD3P38861 518 aaKnown RBP5.14□□□□□ -1.59
SNX4YJL036W STM1P39015 273 aaKnown RBP5.14□□□□□ -1.59
SNX4YJL036W YAR028WP39548 234 aa5.14□□□□□ -1.59
SNX4YJL036W MET10P39692 1035 aa5.14□□□□□ -1.59
SNX4YJL036W MTR4P47047 1073 aaKnown RBP5.14□□□□□ -1.59
SNX4YJL036W NOG1Q02892 647 aaKnown RBP5.14□□□□□ -1.59
SNX4YJL036W YLR257WQ06146 321 aaKnown RBP5.14□□□□□ -1.59
SNX4YJL036W GPI13Q07830 1017 aa5.14□□□□□ -1.59
SNX4YJL036W MDL2P33311 773 aa5.13□□□□□ -1.59
SNX4YJL036W CIC1P38779 376 aaKnown RBP5.13□□□□□ -1.59
SNX4YJL036W FOL2P51601 243 aaKnown RBP5.13□□□□□ -1.59
SNX4YJL036W CLU1Q03690 1277 aaKnown RBP5.13□□□□□ -1.59
SNX4YJL036W NUT2Q06213 157 aa5.13□□□□□ -1.59
SNX4YJL036W YBL113CQ7M4S9 792 aa5.13□□□□□ -1.59
SNX4YJL036W FRT1Q99332 602 aa5.13□□□□□ -1.59
SNX4YJL036W ABZ1P37254 787 aaPredicted RBP5.12□□□□□ -1.59
SNX4YJL036W HSE1P38753 452 aa5.12□□□□□ -1.59
SNX4YJL036W SEC20P28791 383 aa5.11□□□□□ -1.59
SNX4YJL036W ASF1P32447 279 aa5.11□□□□□ -1.59
SNX4YJL036W PAM1P37304 830 aaKnown RBP5.11□□□□□ -1.59
SNX4YJL036W IPL1P38991 367 aa5.11□□□□□ -1.59
SNX4YJL036W LAP2Q10740 671 aa5.11□□□□□ -1.59
SNX4YJL036W YLR358CO13565 187 aa5.1□□□□□ -1.59
SNX4YJL036W PRE10P21242 288 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SNX4YJL036W SHM2P37291 469 aaKnown RBP5.1□□□□□ -1.59
SNX4YJL036W ATG14P38270 344 aa5.1□□□□□ -1.59
SNX4YJL036W UTP5Q04177 643 aaKnown RBP5.1□□□□□ -1.59
SNX4YJL036W RSA3Q05942 220 aaKnown RBP5.1□□□□□ -1.59
SNX4YJL036W HRK1Q08732 759 aaKnown RBP5.1□□□□□ -1.59
SNX4YJL036W VMA4P22203 233 aaKnown RBP5.09□□□□□ -1.59
SNX4YJL036W MSH3P25336 1018 aa5.09□□□□□ -1.59
SNX4YJL036W SRO9P25567 434 aaKnown RBP5.09□□□□□ -1.59
SNX4YJL036W CTS1P29029 562 aa5.09□□□□□ -1.59
SNX4YJL036W AIM26P32858 118 aa5.09□□□□□ -1.59
SNX4YJL036W TUB2P02557 457 aaKnown RBP5.07□□□□□ -1.6
SNX4YJL036W KAR2P16474 682 aaKnown RBP5.07□□□□□ -1.6
SNX4YJL036W XKS1P42826 600 aa5.07□□□□□ -1.6
SNX4YJL036W PEX13P80667 386 aa5.07□□□□□ -1.6
SNX4YJL036W YDR132CQ03900 495 aa5.07□□□□□ -1.6
SNX4YJL036W GCD6P32501 712 aaKnown RBP5.06□□□□□ -1.6
SNX4YJL036W PRP40P33203 583 aaKnown RBP5.06□□□□□ -1.6
SNX4YJL036W VPS35P34110 944 aa5.06□□□□□ -1.6
SNX4YJL036W YHL050CP38721 697 aa5.06□□□□□ -1.6
SNX4YJL036W YHR219WP38900 624 aa5.06□□□□□ -1.6
SNX4YJL036W YJL045WP47052 634 aa5.06□□□□□ -1.6
SNX4YJL036W RSM26P47141 266 aa5.06□□□□□ -1.6
SNX4YJL036W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6 RIP-Chip
SNX4YJL036W MSC6Q08818 692 aaKnown RBP5.05□□□□□ -1.6
SNX4YJL036W TAD3Q9URQ3 322 aa5.05□□□□□ -1.6
SNX4YJL036W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SNX4YJL036W SQT1P35184 431 aa5.04□□□□□ -1.6
SNX4YJL036W QNS1P38795 714 aaKnown RBP5.04□□□□□ -1.6
SNX4YJL036W THI12P42883 340 aa5.04□□□□□ -1.6
SNX4YJL036W THI5P43534 340 aa5.04□□□□□ -1.6
SNX4YJL036W THI11P47183 340 aa5.04□□□□□ -1.6
SNX4YJL036W ENV11P53246 860 aa5.04□□□□□ -1.6
SNX4YJL036W RKM2Q03942 479 aa5.04□□□□□ -1.6
SNX4YJL036W THI13Q07748 340 aa5.04□□□□□ -1.6
SNX4YJL036W RSC58Q07979 502 aa5.04□□□□□ -1.6
SNX4YJL036W TAT2P38967 592 aa5.03□□□□□ -1.6
SNX4YJL036W VPS53P47061 822 aa5.03□□□□□ -1.6
SNX4YJL036W POL32P47110 350 aa5.03□□□□□ -1.6
SNX4YJL036W YNR063WP53749 607 aa5.03□□□□□ -1.6
SNX4YJL036W ULP1Q02724 621 aa5.03□□□□□ -1.6
SNX4YJL036W NBA1Q08229 501 aaKnown RBP5.03□□□□□ -1.6
SNX4YJL036W PNS1Q12412 539 aa5.03□□□□□ -1.6
SNX4YJL036W PHO4P07270 312 aaKnown RBP5.02□□□□□ -1.61
SNX4YJL036W SPS1P08458 490 aa5.02□□□□□ -1.61
SNX4YJL036W NAP1P25293 417 aaKnown RBP5.02□□□□□ -1.61
SNX4YJL036W YSC84P32793 468 aa5.02□□□□□ -1.61
SNX4YJL036W ADD66P36040 267 aa5.02□□□□□ -1.61
SNX4YJL036W PEX28P38848 579 aa5.02□□□□□ -1.61
SNX4YJL036W MPT5P39016 859 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
SNX4YJL036W DAL4Q04895 635 aa5.02□□□□□ -1.61
SNX4YJL036W UGA4P32837 571 aa5.01□□□□□ -1.61
SNX4YJL036W RDH54P38086 958 aa5.01□□□□□ -1.61
SNX4YJL036W PPX1P38698 397 aa5.01□□□□□ -1.61
SNX4YJL036W LAM1P38851 1228 aa5.01□□□□□ -1.61
SNX4YJL036W SPT20P50875 604 aa5.01□□□□□ -1.61
SNX4YJL036W GCN5Q03330 439 aa5.01□□□□□ -1.61
SNX4YJL036W SGD1Q06132 899 aa5.01□□□□□ -1.61
SNX4YJL036W MEF2P39677 819 aa5□□□□□ -1.61
SNX4YJL036W RCL1Q08096 367 aaPredicted RBP5□□□□□ -1.61
SNX4YJL036W YOR352WQ08816 343 aa5□□□□□ -1.61
SNX4YJL036W OXR1Q08952 273 aa5□□□□□ -1.61
SNX4YJL036W WHI5Q12416 295 aa5□□□□□ -1.61
SNX4YJL036W ATE1P16639 503 aa4.99□□□□□ -1.61
SNX4YJL036W YGL140CP53120 1219 aa4.99□□□□□ -1.61
SNX4YJL036W COQ4O13525 335 aa4.98□□□□□ -1.61
SNX4YJL036W ADI1Q03677 179 aa4.98□□□□□ -1.61
SNX4YJL036W RRP15Q06511 250 aaPredicted RBP4.98□□□□□ -1.61
SNX4YJL036W YTA7P40340 1379 aa4.97□□□□□ -1.61
SNX4YJL036W CCZ1P38273 704 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 146.5 ms